RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 SPRR4Q96PI1 79 aa4.9□□□□□ -1.63
MSL3-201ENST00000312196 NDUFC2O95298 119 aa4.89□□□□□ -1.63
MSL3-201ENST00000312196 LINC00158P58513 81 aa4.89□□□□□ -1.63
MSL3-201ENST00000312196 PRR4Q16378 134 aa4.89□□□□□ -1.63
MSL3-201ENST00000312196 HSPB8Q9UJY1 196 aa4.89□□□□□ -1.63
MSL3-201ENST00000312196 Q8NDZ9 215 aa4.89□□□□□ -1.63
MSL3-201ENST00000312196 KRTAP9-2Q9BYQ4 174 aa4.89□□□□□ -1.63
MSL3-201ENST00000312196 KRTDAPP60985 99 aa4.88□□□□□ -1.63
MSL3-201ENST00000312196 TAL2Q16559 108 aa4.88□□□□□ -1.63
MSL3-201ENST00000312196 C3orf79P0CE67 100 aa4.88□□□□□ -1.63
MSL3-201ENST00000312196 HERVK_113P61574 105 aa4.88□□□□□ -1.63
MSL3-201ENST00000312196 TTTY13Q9BZ97 58 aa4.88□□□□□ -1.63
MSL3-201ENST00000312196 NDUFA12Q9UI09 145 aa4.88□□□□□ -1.63
MSL3-201ENST00000312196 IGKV2-28A0A075B6P5 120 aa4.87□□□□□ -1.63
MSL3-201ENST00000312196 IGKV2D-28P01615 120 aa4.87□□□□□ -1.63
MSL3-201ENST00000312196 PPDPFQ9H3Y8 114 aa4.87□□□□□ -1.63
MSL3-201ENST00000312196 LEPROTL1O95214 131 aa4.86□□□□□ -1.63
MSL3-201ENST00000312196 SMIM13P0DJ93 91 aa4.86□□□□□ -1.63
MSL3-201ENST00000312196 C14orf144Q96I85 54 aa4.86□□□□□ -1.63
MSL3-201ENST00000312196 DPM2O94777 84 aa4.86□□□□□ -1.63
MSL3-201ENST00000312196 COA6Q5JTJ3 125 aaKnown RBP4.86□□□□□ -1.63
MSL3-201ENST00000312196 GAGE2AQ6NT46 116 aa4.86□□□□□ -1.63
MSL3-201ENST00000312196 SSBP3-AS1Q7Z2R9 100 aa4.86□□□□□ -1.63
MSL3-201ENST00000312196 SPANXB1Q9NS25 103 aaPredicted RBP4.86□□□□□ -1.63
MSL3-201ENST00000312196 TIMM17BO60830 172 aa4.85□□□□□ -1.63
MSL3-201ENST00000312196 PRLHP81277 87 aa4.85□□□□□ -1.63
MSL3-201ENST00000312196 MEIG1Q5JSS6 88 aa4.85□□□□□ -1.63
MSL3-201ENST00000312196 MIR7-3HGQ8N6C7 128 aa4.85□□□□□ -1.63
MSL3-201ENST00000312196 PYY3Q5JQD4 70 aa4.85□□□□□ -1.63
MSL3-201ENST00000312196 SMIM20Q8N5G0 67 aa4.85□□□□□ -1.63
MSL3-201ENST00000312196 SPINK1P00995 79 aa4.84□□□□□ -1.63
MSL3-201ENST00000312196 S100A2P29034 98 aa4.84□□□□□ -1.63
MSL3-201ENST00000312196 ETDCA0A1B0GVM5 59 aa4.84□□□□□ -1.64
MSL3-201ENST00000312196 J3QQQ9 107 aa4.84□□□□□ -1.64
MSL3-201ENST00000312196 IGLV6-57P01721 117 aa4.84□□□□□ -1.64
MSL3-201ENST00000312196 SMCR5Q8TEV8 140 aa4.84□□□□□ -1.64
MSL3-201ENST00000312196 TRIAP1O43715 76 aa4.83□□□□□ -1.64
MSL3-201ENST00000312196 IGKCP01834 107 aa4.83□□□□□ -1.64
MSL3-201ENST00000312196 IGLV7-46A0A075B6I9 117 aa4.83□□□□□ -1.64
MSL3-201ENST00000312196 A0A0J9YXY3 114 aa4.83□□□□□ -1.64
MSL3-201ENST00000312196 E9PLD3 99 aa4.83□□□□□ -1.64
MSL3-201ENST00000312196 VPS25Q9BRG1 176 aa4.83□□□□□ -1.64
MSL3-201ENST00000312196 TRBV10-3A0A0K0K1G6 114 aa4.82□□□□□ -1.64
MSL3-201ENST00000312196 KRTAP9-6A0A140TA67 174 aa4.82□□□□□ -1.64
MSL3-201ENST00000312196 SYS1-DBNDD2H3BUS1 97 aa4.82□□□□□ -1.64
MSL3-201ENST00000312196 JOSD1Q15040 202 aaPredicted RBP4.82□□□□□ -1.64
MSL3-201ENST00000312196 LGALS3P17931 250 aaKnown RBP4.81□□□□□ -1.64
MSL3-201ENST00000312196 SPRR1BP22528 89 aa4.81□□□□□ -1.64
MSL3-201ENST00000312196 DDTP30046 118 aa4.81□□□□□ -1.64
MSL3-201ENST00000312196 TSPEAR-AS2P59090 65 aa4.81□□□□□ -1.64
MSL3-201ENST00000312196 C3orf22Q8N5N4 141 aa4.81□□□□□ -1.64
MSL3-201ENST00000312196 HIGD2AQ9BW72 106 aa4.81□□□□□ -1.64
MSL3-201ENST00000312196 ANAPC11Q9NYG5 84 aa4.81□□□□□ -1.64
MSL3-201ENST00000312196 Q6ZRX8 168 aa4.81□□□□□ -1.64
MSL3-201ENST00000312196 NCR3O14931 201 aa4.8□□□□□ -1.64
MSL3-201ENST00000312196 PRO1933Q9H354 126 aa4.79□□□□□ -1.64
MSL3-201ENST00000312196 SS18L2Q9UHA2 77 aa4.79□□□□□ -1.64
MSL3-201ENST00000312196 TRBV7-6A0A0J9YX20 115 aa4.79□□□□□ -1.64
MSL3-201ENST00000312196 LINC01545Q5VT33 79 aa4.79□□□□□ -1.64
MSL3-201ENST00000312196 Q8NBF4 154 aa4.79□□□□□ -1.64
MSL3-201ENST00000312196 PAM16Q9Y3D7 125 aa4.79□□□□□ -1.64
MSL3-201ENST00000312196 SLC25A20O43772 301 aa4.78□□□□□ -1.64
MSL3-201ENST00000312196 C4orf26Q17RF5 130 aa4.78□□□□□ -1.64
MSL3-201ENST00000312196 KRTAP13-3Q3SY46 172 aa4.78□□□□□ -1.64
MSL3-201ENST00000312196 SLC25A34Q6PIV7 304 aa4.78□□□□□ -1.64
MSL3-201ENST00000312196 SIGMAR1Q99720 223 aa4.78□□□□□ -1.64
MSL3-201ENST00000312196 MIEN1Q9BRT3 115 aa4.78□□□□□ -1.64
MSL3-201ENST00000312196 LPAP08519 4548 aa4.78□□□□□ -1.64
MSL3-201ENST00000312196 TRAV23DV6A0A075B6W5 121 aa4.78□□□□□ -1.64
MSL3-201ENST00000312196 ASB16-AS1Q495Z4 193 aa4.78□□□□□ -1.64
MSL3-201ENST00000312196 PCP2Q8IVA1 136 aa4.78□□□□□ -1.64
MSL3-201ENST00000312196 COPS9Q8WXC6 57 aa4.78□□□□□ -1.64
MSL3-201ENST00000312196 SPANXDQ9BXN6 97 aa4.78□□□□□ -1.64
MSL3-201ENST00000312196 LITAFQ99732 161 aa4.77□□□□□ -1.65
MSL3-201ENST00000312196 Q9BRP9 147 aa4.77□□□□□ -1.65
MSL3-201ENST00000312196 DHRS4-AS1Q9P1J3 65 aa4.77□□□□□ -1.65
MSL3-201ENST00000312196 S100A7L2Q5SY68 101 aa4.77□□□□□ -1.65
MSL3-201ENST00000312196 Q6ZVH6 145 aa4.77□□□□□ -1.65
MSL3-201ENST00000312196 SPANXCQ9NY87 97 aa4.77□□□□□ -1.65
MSL3-201ENST00000312196 ZNF73O43830 326 aaPredicted RBP4.76□□□□□ -1.65
MSL3-201ENST00000312196 CD164Q04900 197 aa4.76□□□□□ -1.65
MSL3-201ENST00000312196 Q8N377 158 aa4.76□□□□□ -1.65
MSL3-201ENST00000312196 HINT1P49773 126 aaPredicted RBP4.75□□□□□ -1.65
MSL3-201ENST00000312196 SOSTDC1Q6X4U4 206 aa4.75□□□□□ -1.65
MSL3-201ENST00000312196 DAND5Q8N907 189 aa4.75□□□□□ -1.65
MSL3-201ENST00000312196 IFITM1P13164 125 aa4.75□□□□□ -1.65
MSL3-201ENST00000312196 LINC00308Q8TCZ7 52 aa4.75□□□□□ -1.65
MSL3-201ENST00000312196 PRO0628Q9UI54 55 aa4.75□□□□□ -1.65
MSL3-201ENST00000312196 ERC2-IT1O76042 136 aa4.74□□□□□ -1.65
MSL3-201ENST00000312196 NPC2P61916 151 aa4.74□□□□□ -1.65
MSL3-201ENST00000312196 ADAMTSL4-AS1Q5T5F5 129 aa4.74□□□□□ -1.65
MSL3-201ENST00000312196 Q5XG85 94 aa4.74□□□□□ -1.65
MSL3-201ENST00000312196 SEC61BP60468 96 aaKnown RBP4.74□□□□□ -1.65
MSL3-201ENST00000312196 XP32Q5T750 250 aa4.74□□□□□ -1.65
MSL3-201ENST00000312196 Q75L30 129 aa4.73□□□□□ -1.65
MSL3-201ENST00000312196 RETNLBQ9BQ08 111 aa4.73□□□□□ -1.65
MSL3-201ENST00000312196 MOBPQ13875 183 aa4.72□□□□□ -1.65
MSL3-201ENST00000312196 SPATA45Q537H7 98 aa4.72□□□□□ -1.65
MSL3-201ENST00000312196 LIMD2Q9BT23 127 aa4.72□□□□□ -1.65
MSL3-201ENST00000312196 FAT4Q6V0I7 4981 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms