RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 SPANXA2-OT1Q8N9U9 137 aa10.47□□□□□ -0.73
HCFC1-201ENST00000310441 KRTAP10-9P60411 292 aa10.44□□□□□ -0.74
HCFC1-201ENST00000310441 A0A1B0GVX0 72 aa10.44□□□□□ -0.74
HCFC1-201ENST00000310441 CFAP46Q8IYW2 2715 aa10.43□□□□□ -0.74
HCFC1-201ENST00000310441 A8MUN3 132 aa10.42□□□□□ -0.74
HCFC1-201ENST00000310441 LINC00304Q8N9R0 145 aa10.42□□□□□ -0.74
HCFC1-201ENST00000310441 Q8NAQ8 132 aa10.42□□□□□ -0.74
HCFC1-201ENST00000310441 RBM12B-AS1Q9P1G2 102 aa10.42□□□□□ -0.74
HCFC1-201ENST00000310441 J3QL48 77 aa10.41□□□□□ -0.74
HCFC1-201ENST00000310441 LINC00588Q9Y4M8 146 aa10.41□□□□□ -0.74
HCFC1-201ENST00000310441 C10orf142B7Z368 130 aa10.4□□□□□ -0.74
HCFC1-201ENST00000310441 NBEAL1Q6ZS30 2694 aa10.4□□□□□ -0.74
HCFC1-201ENST00000310441 FLNAP21333 2647 aaKnown RBP10.39□□□□□ -0.75
HCFC1-201ENST00000310441 C8orf17Q9NRJ1 99 aa10.39□□□□□ -0.75
HCFC1-201ENST00000310441 IGLV1-50A0A075B6I6 118 aa10.37□□□□□ -0.75
HCFC1-201ENST00000310441 C9orf129Q5T035 196 aaKnown RBP10.36□□□□□ -0.75
HCFC1-201ENST00000310441 CENPEQ02224 2701 aa10.36□□□□□ -0.75
HCFC1-201ENST00000310441 A0A1W2PPR1 153 aa10.36□□□□□ -0.75
HCFC1-201ENST00000310441 LINC00528Q8N1L1 170 aa10.35□□□□□ -0.75
HCFC1-201ENST00000310441 LITAFQ99732 161 aa10.35□□□□□ -0.75
HCFC1-201ENST00000310441 ZNF861PO60384 105 aa10.35□□□□□ -0.75
HCFC1-201ENST00000310441 PLA2G2DQ9UNK4 145 aa10.35□□□□□ -0.75
HCFC1-201ENST00000310441 IGFL1Q6UW32 110 aa10.34□□□□□ -0.75
HCFC1-201ENST00000310441 OBSCN-AS1Q96MR7 158 aa10.33□□□□□ -0.76
HCFC1-201ENST00000310441 LINC00336Q6ZUF6 198 aa10.33□□□□□ -0.76
HCFC1-201ENST00000310441 LINC00483Q53H64 154 aa10.32□□□□□ -0.76
HCFC1-201ENST00000310441 WWC2-AS2Q96NR7 200 aa10.32□□□□□ -0.76
HCFC1-201ENST00000310441 FLNBO75369 2602 aaKnown RBP10.32□□□□□ -0.76
HCFC1-201ENST00000310441 FAM168BA1KXE4 195 aa10.3□□□□□ -0.76
HCFC1-201ENST00000310441 H7BZZ5 65 aa10.29□□□□□ -0.76
HCFC1-201ENST00000310441 FAM104AQ969W3 186 aa10.28□□□□□ -0.76
HCFC1-201ENST00000310441 STAB1Q9NY15 2570 aa10.28□□□□□ -0.76
HCFC1-201ENST00000310441 TLX1NBP0CAT3 122 aa10.28□□□□□ -0.76
HCFC1-201ENST00000310441 KLK9Q2XQG4 91 aa10.27□□□□□ -0.76
HCFC1-201ENST00000310441 DSCR10P59022 87 aa10.27□□□□□ -0.77
HCFC1-201ENST00000310441 C15orf56Q8N910 161 aa10.26□□□□□ -0.77
HCFC1-201ENST00000310441 ITPR3Q14573 2671 aa10.25□□□□□ -0.77
HCFC1-201ENST00000310441 Q1T7F1 81 aa10.25□□□□□ -0.77
HCFC1-201ENST00000310441 IGLV5-37A0A075B6J1 123 aa10.24□□□□□ -0.77
HCFC1-201ENST00000310441 PRR34Q9NV39 138 aa10.24□□□□□ -0.77
HCFC1-201ENST00000310441 Q8N377 158 aa10.2□□□□□ -0.78
HCFC1-201ENST00000310441 CSNK1G2-AS1Q8NCQ2 148 aa10.2□□□□□ -0.78
HCFC1-201ENST00000310441 A0A0A0MQY5 61 aa10.19□□□□□ -0.78
HCFC1-201ENST00000310441 H3BS24 57 aa10.18□□□□□ -0.78
HCFC1-201ENST00000310441 WIPF1O43516 503 aa10.18□□□□□ -0.78
HCFC1-201ENST00000310441 HELZ2Q9BYK8 2649 aaKnown RBP10.17□□□□□ -0.78
HCFC1-201ENST00000310441 C9orf92A6NGG3 77 aa10.14□□□□□ -0.79
HCFC1-201ENST00000310441 EP400Q96L91 3159 aa10.12□□□□□ -0.79
HCFC1-201ENST00000310441 KMT2BQ9UMN6 2715 aaPredicted RBP10.12□□□□□ -0.79
HCFC1-201ENST00000310441 DMBT1Q9UGM3 2413 aaPredicted RBP10.12□□□□□ -0.79
HCFC1-201ENST00000310441 IGLV7-43P04211 117 aa10.12□□□□□ -0.79
HCFC1-201ENST00000310441 A0A0D9SG42 100 aa10.12□□□□□ -0.79
HCFC1-201ENST00000310441 CNBPP62633 177 aaKnown RBP10.11□□□□□ -0.79
HCFC1-201ENST00000310441 CHD6Q8TD26 2715 aa10.1□□□□□ -0.79
HCFC1-201ENST00000310441 C9orf163Q8N9P6 203 aa10.1□□□□□ -0.79
HCFC1-201ENST00000310441 SPRR4Q96PI1 79 aa10.09□□□□□ -0.79
HCFC1-201ENST00000310441 KRTAP24-1Q3LI83 254 aa10.08□□□□□ -0.8
HCFC1-201ENST00000310441 IGLV5-48A0A075B6I7 105 aa10.07□□□□□ -0.8
HCFC1-201ENST00000310441 A0A087WTM6 91 aa10.07□□□□□ -0.8
HCFC1-201ENST00000310441 Q75L30 129 aa10.07□□□□□ -0.8
HCFC1-201ENST00000310441 NOTCH1P46531 2555 aa10.06□□□□□ -0.8
HCFC1-201ENST00000310441 UNC79Q9P2D8 2635 aa10.04□□□□□ -0.8
HCFC1-201ENST00000310441 HRES1P13985 223 aa10.04□□□□□ -0.8
HCFC1-201ENST00000310441 TEX15Q9BXT5 2789 aa10.03□□□□□ -0.8
HCFC1-201ENST00000310441 CAMK2N1Q7Z7J9 78 aa10.03□□□□□ -0.8
HCFC1-201ENST00000310441 A0A1B0GU33 70 aa10.03□□□□□ -0.8
HCFC1-201ENST00000310441 SRCAPQ6ZRS2 3230 aa10.02□□□□□ -0.81
HCFC1-201ENST00000310441 DMAC1Q96GE9 116 aa10.02□□□□□ -0.81
HCFC1-201ENST00000310441 PSORS1C2Q9UIG4 136 aa10.01□□□□□ -0.81
HCFC1-201ENST00000310441 LINC00612Q8N6U2 182 aa10.01□□□□□ -0.81
HCFC1-201ENST00000310441 Q8N1X5 172 aa10□□□□□ -0.81
HCFC1-201ENST00000310441 GCN1Q92616 2671 aaKnown RBP10□□□□□ -0.81
HCFC1-201ENST00000310441 OCR1Q9BZK8 76 aa9.99□□□□□ -0.81
HCFC1-201ENST00000310441 IGLV7-46A0A075B6I9 117 aa9.99□□□□□ -0.81
HCFC1-201ENST00000310441 COL6A5A8TX70 2615 aa9.98□□□□□ -0.81
HCFC1-201ENST00000310441 C19orf73Q9NVV2 129 aa9.98□□□□□ -0.81
HCFC1-201ENST00000310441 Q6ZSA8 131 aa9.96□□□□□ -0.81
HCFC1-201ENST00000310441 K7EIL1 84 aa9.93□□□□□ -0.82
HCFC1-201ENST00000310441 FAM229BQ4G0N7 80 aa9.92□□□□□ -0.82
HCFC1-201ENST00000310441 ZNF575Q86XF7 245 aa9.91□□□□□ -0.82
HCFC1-201ENST00000310441 A0A1W2PNM2 257 aa9.9□□□□□ -0.82
HCFC1-201ENST00000310441 KRTAP10-11P60412 298 aa9.9□□□□□ -0.82
HCFC1-201ENST00000310441 STAB2Q8WWQ8 2551 aa9.9□□□□□ -0.82
HCFC1-201ENST00000310441 EIF4EBP3O60516 100 aaPredicted RBP9.88□□□□□ -0.83
HCFC1-201ENST00000310441 GIG44P09565 113 aaPredicted RBP9.85□□□□□ -0.83
HCFC1-201ENST00000310441 PRR26Q8N8Z3 221 aa9.85□□□□□ -0.83
HCFC1-201ENST00000310441 TNP2Q05952 138 aa9.85□□□□□ -0.83
HCFC1-201ENST00000310441 A0A1W2PNN7 141 aa9.85□□□□□ -0.83
HCFC1-201ENST00000310441 CSAG1Q6PB30 78 aa9.83□□□□□ -0.84
HCFC1-201ENST00000310441 S4R3F8 94 aa9.83□□□□□ -0.84
HCFC1-201ENST00000310441 ANAPC11Q9NYG5 84 aa9.82□□□□□ -0.84
HCFC1-201ENST00000310441 LINC01558Q9Y6Z2 57 aa9.79□□□□□ -0.84
HCFC1-201ENST00000310441 M0R2T5 61 aa9.79□□□□□ -0.84
HCFC1-201ENST00000310441 A0A0G2JQZ4 141 aa9.79□□□□□ -0.84
HCFC1-201ENST00000310441 SMR3BP02814 79 aaPredicted RBP9.79□□□□□ -0.84
HCFC1-201ENST00000310441 TEP1Q99973 2627 aaKnown RBP9.78□□□□□ -0.84
HCFC1-201ENST00000310441 CEP350Q5VT06 3117 aa9.77□□□□□ -0.85
HCFC1-201ENST00000310441 ITPR2Q14571 2701 aa9.76□□□□□ -0.85
HCFC1-201ENST00000310441 ZCCHC13Q8WW36 166 aaKnown RBP9.75□□□□□ -0.85
HCFC1-201ENST00000310441 ASB16-AS1Q495Z4 193 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms