RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 LINC00526Q96FQ7 95 aa3.32□□□□□ -1.88
CKS1B-201ENST00000308987 LINC00167Q96N53 147 aa3.32□□□□□ -1.88
CKS1B-201ENST00000308987 NOP10Q9NPE3 64 aaKnown RBP3.32□□□□□ -1.88
CKS1B-201ENST00000308987 SS18L2Q9UHA2 77 aa3.32□□□□□ -1.88
CKS1B-201ENST00000308987 DMBT1Q9UGM3 2413 aaPredicted RBP3.31□□□□□ -1.88
CKS1B-201ENST00000308987 TRGV2A0A075B6R0 118 aa3.31□□□□□ -1.88
CKS1B-201ENST00000308987 A0A087WYN8 130 aa3.31□□□□□ -1.88
CKS1B-201ENST00000308987 TRGV4A0A0C4DH28 118 aa3.31□□□□□ -1.88
CKS1B-201ENST00000308987 FAM236AA0A1B0GUQ0 79 aa3.31□□□□□ -1.88
CKS1B-201ENST00000308987 FAM236BA0A1B0GV22 79 aa3.31□□□□□ -1.88
CKS1B-201ENST00000308987 ATOX1O00244 68 aa3.31□□□□□ -1.88
CKS1B-201ENST00000308987 NDUFC2O95298 119 aa3.31□□□□□ -1.88
CKS1B-201ENST00000308987 APOC4P55056 127 aa3.31□□□□□ -1.88
CKS1B-201ENST00000308987 LINC00158P58513 81 aa3.31□□□□□ -1.88
CKS1B-201ENST00000308987 COX17Q14061 63 aa3.31□□□□□ -1.88
CKS1B-201ENST00000308987 S100A7L2Q5SY68 101 aa3.31□□□□□ -1.88
CKS1B-201ENST00000308987 Q6JHZ5 121 aa3.31□□□□□ -1.88
CKS1B-201ENST00000308987 SMIM11BQ8TCY0 68 aa3.31□□□□□ -1.88
CKS1B-201ENST00000308987 FAM218AQ96MZ4 157 aa3.31□□□□□ -1.88
CKS1B-201ENST00000308987 A0A0U1RRA0 63 aa3.3□□□□□ -1.88
CKS1B-201ENST00000308987 LINC00959A0A1B0GUT2 108 aa3.3□□□□□ -1.88
CKS1B-201ENST00000308987 SMIM9A6NGZ8 99 aa3.3□□□□□ -1.88
CKS1B-201ENST00000308987 JMJD7-PLA2G4BH0Y9G9 81 aa3.3□□□□□ -1.88
CKS1B-201ENST00000308987 H3BQ85 93 aa3.3□□□□□ -1.88
CKS1B-201ENST00000308987 COX7CP15954 63 aa3.3□□□□□ -1.88
CKS1B-201ENST00000308987 SS18Q15532 418 aa3.3□□□□□ -1.88
CKS1B-201ENST00000308987 ATP5EP2Q5VTU8 51 aa3.3□□□□□ -1.88
CKS1B-201ENST00000308987 Q8NAQ8 132 aa3.3□□□□□ -1.88
CKS1B-201ENST00000308987 C11orf45Q8TAV5 145 aa3.3□□□□□ -1.88
CKS1B-201ENST00000308987 SMCR5Q8TEV8 140 aa3.3□□□□□ -1.88
CKS1B-201ENST00000308987 CHCHD5Q9BSY4 110 aa3.3□□□□□ -1.88
CKS1B-201ENST00000308987 C11orf68Q9H3H3 251 aaKnown RBP3.3□□□□□ -1.88
CKS1B-201ENST00000308987 FLG2Q5D862 2391 aaPredicted RBP3.3□□□□□ -1.88
CKS1B-201ENST00000308987 IGLV4-60A0A075B6I1 120 aa3.29□□□□□ -1.88
CKS1B-201ENST00000308987 IGHV4-28A0A0C4DH34 117 aa3.29□□□□□ -1.88
CKS1B-201ENST00000308987 BCE1O60756 84 aa3.29□□□□□ -1.88
CKS1B-201ENST00000308987 CRYGAP11844 174 aa3.29□□□□□ -1.88
CKS1B-201ENST00000308987 C6orf226Q5I0X4 101 aa3.29□□□□□ -1.88
CKS1B-201ENST00000308987 GAGE2AQ6NT46 116 aa3.29□□□□□ -1.88
CKS1B-201ENST00000308987 ORMDL1Q9P0S3 153 aa3.29□□□□□ -1.88
CKS1B-201ENST00000308987 TOMM7Q9P0U1 55 aa3.29□□□□□ -1.88
CKS1B-201ENST00000308987 CELA1Q9UNI1 258 aa3.29□□□□□ -1.88
CKS1B-201ENST00000308987 FAT3Q8TDW7 4589 aa3.29□□□□□ -1.88
CKS1B-201ENST00000308987 LRP1Q07954 4544 aaKnown RBP3.29□□□□□ -1.88
CKS1B-201ENST00000308987 TRBV10-3A0A0K0K1G6 114 aa3.28□□□□□ -1.88
CKS1B-201ENST00000308987 LYRM9A8MSI8 78 aa3.28□□□□□ -1.88
CKS1B-201ENST00000308987 TMEM256-PLSCR3K7ERE1 68 aa3.28□□□□□ -1.88
CKS1B-201ENST00000308987 M0R2N4 97 aa3.28□□□□□ -1.88
CKS1B-201ENST00000308987 PRYO14603 147 aa3.28□□□□□ -1.88
CKS1B-201ENST00000308987 LECT2O14960 151 aa3.28□□□□□ -1.88
CKS1B-201ENST00000308987 CCKP06307 115 aa3.28□□□□□ -1.88
CKS1B-201ENST00000308987 RPS28P62857 69 aaKnown RBP3.28□□□□□ -1.88
CKS1B-201ENST00000308987 RPL18AQ02543 176 aaKnown RBP3.28□□□□□ -1.88
CKS1B-201ENST00000308987 C9orf153Q5TBE3 101 aa3.28□□□□□ -1.88
CKS1B-201ENST00000308987 LINC00336Q6ZUF6 198 aa3.28□□□□□ -1.88
CKS1B-201ENST00000308987 Q9HAA7 133 aa3.28□□□□□ -1.88
CKS1B-201ENST00000308987 PRO0255Q9UI72 69 aa3.28□□□□□ -1.88
CKS1B-201ENST00000308987 LOC100131303A0A0U1RQF7 123 aa3.27□□□□□ -1.89
CKS1B-201ENST00000308987 CD164L2Q6UWJ8 174 aa3.27□□□□□ -1.89
CKS1B-201ENST00000308987 LYPD5Q6UWN5 251 aa3.27□□□□□ -1.89
CKS1B-201ENST00000308987 Q6ZR54 194 aa3.27□□□□□ -1.89
CKS1B-201ENST00000308987 SERP2Q8N6R1 65 aa3.27□□□□□ -1.89
CKS1B-201ENST00000308987 C2orf48Q96LS8 159 aa3.27□□□□□ -1.89
CKS1B-201ENST00000308987 PDE6GP18545 87 aa3.26□□□□□ -1.89
CKS1B-201ENST00000308987 PFN2P35080 140 aa3.26□□□□□ -1.89
CKS1B-201ENST00000308987 KIAA0087Q14695 138 aa3.26□□□□□ -1.89
CKS1B-201ENST00000308987 CFAP161Q6P656 301 aa3.26□□□□□ -1.89
CKS1B-201ENST00000308987 SMIM20Q8N5G0 67 aa3.26□□□□□ -1.89
CKS1B-201ENST00000308987 Q8N814 137 aa3.26□□□□□ -1.89
CKS1B-201ENST00000308987 PRR26Q8N8Z3 221 aa3.26□□□□□ -1.89
CKS1B-201ENST00000308987 OR13C6PQ8NH95 151 aa3.26□□□□□ -1.89
CKS1B-201ENST00000308987 C14orf132Q9NPU4 83 aa3.26□□□□□ -1.89
CKS1B-201ENST00000308987 LINC00846Q9NV44 126 aa3.26□□□□□ -1.89
CKS1B-201ENST00000308987 PKHD1L1Q86WI1 4243 aa3.25□□□□□ -1.89
CKS1B-201ENST00000308987 LOC110117498A0A087WWA1 95 aa3.25□□□□□ -1.89
CKS1B-201ENST00000308987 TRAV10A0A0B4J240 114 aa3.25□□□□□ -1.89
CKS1B-201ENST00000308987 hADV29S1A0JD25 119 aa3.25□□□□□ -1.89
CKS1B-201ENST00000308987 NDUFC2-KCTD14E9PQ53 114 aa3.25□□□□□ -1.89
CKS1B-201ENST00000308987 J3KT08 172 aa3.25□□□□□ -1.89
CKS1B-201ENST00000308987 TMEM258P61165 79 aa3.25□□□□□ -1.89
CKS1B-201ENST00000308987 GVQW2A0A096LPI5 108 aaPredicted RBP3.24□□□□□ -1.89
CKS1B-201ENST00000308987 IGKV3OR2-268A0A0C4DH90 116 aa3.24□□□□□ -1.89
CKS1B-201ENST00000308987 TRBV7-6A0A0J9YX20 115 aa3.24□□□□□ -1.89
CKS1B-201ENST00000308987 USP17L23D6RBM5 183 aa3.24□□□□□ -1.89
CKS1B-201ENST00000308987 NCR3O14931 201 aa3.24□□□□□ -1.89
CKS1B-201ENST00000308987 XCL1P47992 114 aa3.24□□□□□ -1.89
CKS1B-201ENST00000308987 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
CKS1B-201ENST00000308987 LINC00575Q6W349 94 aa3.24□□□□□ -1.89
CKS1B-201ENST00000308987 CHCHD10Q8WYQ3 142 aaPredicted RBP3.24□□□□□ -1.89
CKS1B-201ENST00000308987 UPK3BQ9BT76 320 aa3.24□□□□□ -1.89
CKS1B-201ENST00000308987 UBL5Q9BZL1 73 aa3.24□□□□□ -1.89
CKS1B-201ENST00000308987 UBR4Q5T4S7 5183 aa3.24□□□□□ -1.89
CKS1B-201ENST00000308987 HMCN2Q8NDA2 5059 aa3.24□□□□□ -1.89
CKS1B-201ENST00000308987 DEFB131BA0A096LNP1 70 aa3.23□□□□□ -1.89
CKS1B-201ENST00000308987 IGLV6-57P01721 117 aa3.23□□□□□ -1.89
CKS1B-201ENST00000308987 DEFB130BP0DP73 79 aa3.23□□□□□ -1.89
CKS1B-201ENST00000308987 DEFB130AP0DP74 79 aa3.23□□□□□ -1.89
CKS1B-201ENST00000308987 MIFP14174 115 aa3.23□□□□□ -1.89
CKS1B-201ENST00000308987 REG3AQ06141 175 aa3.23□□□□□ -1.89
CKS1B-201ENST00000308987 C9orf129Q5T035 196 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms