RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 Q6ZRU5 148 aa9.58□□□□□ -0.88
SDC2-201ENST00000302190 ANK2Q01484 3957 aa9.57□□□□□ -0.88
SDC2-201ENST00000302190 LYPD5Q6UWN5 251 aa9.57□□□□□ -0.88
SDC2-201ENST00000302190 KRTAP24-1Q3LI83 254 aa9.57□□□□□ -0.88
SDC2-201ENST00000302190 IL17DQ8TAD2 202 aa9.57□□□□□ -0.88
SDC2-201ENST00000302190 RMI2Q96E14 147 aa9.55□□□□□ -0.88
SDC2-201ENST00000302190 TRAV7A0A075B6U4 112 aa9.55□□□□□ -0.88
SDC2-201ENST00000302190 PRR4Q16378 134 aa9.55□□□□□ -0.88
SDC2-201ENST00000302190 C6orf48Q9UBA6 75 aa9.54□□□□□ -0.88
SDC2-201ENST00000302190 Q6ZVQ6 151 aa9.54□□□□□ -0.88
SDC2-201ENST00000302190 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.53□□□□□ -0.88
SDC2-201ENST00000302190 LINC00474Q9P2X8 69 aa9.53□□□□□ -0.88
SDC2-201ENST00000302190 C22orf24Q9Y442 160 aa9.53□□□□□ -0.88
SDC2-201ENST00000302190 M0R378 163 aa9.52□□□□□ -0.89
SDC2-201ENST00000302190 LINC01547P58512 204 aaPredicted RBP9.51□□□□□ -0.89
SDC2-201ENST00000302190 PDE6GP18545 87 aa9.51□□□□□ -0.89
SDC2-201ENST00000302190 H7BZZ5 65 aa9.5□□□□□ -0.89
SDC2-201ENST00000302190 MUC7Q8TAX7 377 aa9.5□□□□□ -0.89
SDC2-201ENST00000302190 TRBV7-6A0A0J9YX20 115 aa9.5□□□□□ -0.89
SDC2-201ENST00000302190 KIAA0087Q14695 138 aa9.5□□□□□ -0.89
SDC2-201ENST00000302190 TENM3Q9P273 2699 aa9.49□□□□□ -0.89
SDC2-201ENST00000302190 DEFB116Q30KQ4 102 aa9.49□□□□□ -0.89
SDC2-201ENST00000302190 LRCOL1A6NCL2 159 aa9.49□□□□□ -0.89
SDC2-201ENST00000302190 M0R2N4 97 aa9.48□□□□□ -0.89
SDC2-201ENST00000302190 ESRGQ1W209 222 aa9.48□□□□□ -0.89
SDC2-201ENST00000302190 Q8NAQ8 132 aa9.48□□□□□ -0.89
SDC2-201ENST00000302190 FP248Q71RG6 208 aaPredicted RBP9.47□□□□□ -0.89
SDC2-201ENST00000302190 FAM19A3Q7Z5A8 133 aa9.47□□□□□ -0.89
SDC2-201ENST00000302190 EGFEM1PQ0D2K5 195 aa9.46□□□□□ -0.89
SDC2-201ENST00000302190 FAM30AQ9NZY2 134 aa9.46□□□□□ -0.89
SDC2-201ENST00000302190 TRAV10A0A0B4J240 114 aa9.45□□□□□ -0.9
SDC2-201ENST00000302190 NDUFC1O43677 76 aa9.45□□□□□ -0.9
SDC2-201ENST00000302190 WFDC13Q8IUB5 93 aa9.44□□□□□ -0.9
SDC2-201ENST00000302190 Q8NDZ9 215 aa9.43□□□□□ -0.9
SDC2-201ENST00000302190 Q6ZQT0 140 aa9.42□□□□□ -0.9
SDC2-201ENST00000302190 MDFIQ99750 246 aa9.41□□□□□ -0.9
SDC2-201ENST00000302190 ATP5EP56381 51 aaPredicted RBP9.4□□□□□ -0.9
SDC2-201ENST00000302190 UBE2AP49459 152 aa9.39□□□□□ -0.91
SDC2-201ENST00000302190 C1orf137Q5JT78 98 aa9.39□□□□□ -0.91
SDC2-201ENST00000302190 Q6ZRP5 223 aa9.39□□□□□ -0.91
SDC2-201ENST00000302190 TM2D3Q9BRN9 247 aa9.39□□□□□ -0.91
SDC2-201ENST00000302190 CMYA5Q8N3K9 4069 aa9.38□□□□□ -0.91
SDC2-201ENST00000302190 KLKP1Q107X0 134 aa9.38□□□□□ -0.91
SDC2-201ENST00000302190 PMAIP1Q13794 54 aa9.38□□□□□ -0.91
SDC2-201ENST00000302190 C7orf33Q8WU49 177 aa9.38□□□□□ -0.91
SDC2-201ENST00000302190 H3BQ85 93 aa9.38□□□□□ -0.91
SDC2-201ENST00000302190 NDUFS5O43920 106 aa9.38□□□□□ -0.91
SDC2-201ENST00000302190 FAM168BA1KXE4 195 aa9.37□□□□□ -0.91
SDC2-201ENST00000302190 PRLHP81277 87 aa9.37□□□□□ -0.91
SDC2-201ENST00000302190 H0Y9J4 135 aa9.37□□□□□ -0.91
SDC2-201ENST00000302190 ST20-AS1Q8NBB2 130 aa9.37□□□□□ -0.91
SDC2-201ENST00000302190 TMEM254Q8TBM7 123 aa9.37□□□□□ -0.91
SDC2-201ENST00000302190 OBSCN-AS1Q96MR7 158 aa9.37□□□□□ -0.91
SDC2-201ENST00000302190 A0A0G2JQZ4 141 aa9.36□□□□□ -0.91
SDC2-201ENST00000302190 A0A1W2PNN7 141 aa9.36□□□□□ -0.91
SDC2-201ENST00000302190 DNHD1Q96M86 4753 aa9.36□□□□□ -0.91
SDC2-201ENST00000302190 STAB2Q8WWQ8 2551 aa9.35□□□□□ -0.91
SDC2-201ENST00000302190 IGLV6-57P01721 117 aa9.35□□□□□ -0.91
SDC2-201ENST00000302190 VPREB1P12018 145 aa9.34□□□□□ -0.92
SDC2-201ENST00000302190 EPM2AB3EWF7 344 aa9.33□□□□□ -0.92
SDC2-201ENST00000302190 LINC00612Q8N6U2 182 aa9.33□□□□□ -0.92
SDC2-201ENST00000302190 TENM2Q9NT68 2774 aa9.33□□□□□ -0.92
SDC2-201ENST00000302190 BCE1O60756 84 aa9.33□□□□□ -0.92
SDC2-201ENST00000302190 ELOF1P60002 83 aaKnown RBP9.33□□□□□ -0.92
SDC2-201ENST00000302190 SERTAD4-AS1Q5TG53 156 aa9.33□□□□□ -0.92
SDC2-201ENST00000302190 COL7A1Q02388 2944 aa9.33□□□□□ -0.92
SDC2-201ENST00000302190 TGP01266 2768 aa9.32□□□□□ -0.92
SDC2-201ENST00000302190 CDK2AP2O75956 126 aa9.32□□□□□ -0.92
SDC2-201ENST00000302190 KRTAP10-11P60412 298 aa9.31□□□□□ -0.92
SDC2-201ENST00000302190 LINC00167Q96N53 147 aa9.31□□□□□ -0.92
SDC2-201ENST00000302190 DHRS4-AS1Q9P1J3 65 aa9.31□□□□□ -0.92
SDC2-201ENST00000302190 PRYO14603 147 aa9.3□□□□□ -0.92
SDC2-201ENST00000302190 A0A087WSZ3 146 aa9.3□□□□□ -0.92
SDC2-201ENST00000302190 PRR34Q9NV39 138 aa9.29□□□□□ -0.92
SDC2-201ENST00000302190 MP68P56378 58 aa9.29□□□□□ -0.92
SDC2-201ENST00000302190 MRPL55Q7Z7F7 128 aaKnown RBP9.28□□□□□ -0.92
SDC2-201ENST00000302190 SMIM29Q86T20 159 aa9.28□□□□□ -0.92
SDC2-201ENST00000302190 FAM229BQ4G0N7 80 aa9.27□□□□□ -0.92
SDC2-201ENST00000302190 CASC10Q5T4H9 136 aa9.27□□□□□ -0.92
SDC2-201ENST00000302190 C15orf56Q8N910 161 aa9.27□□□□□ -0.92
SDC2-201ENST00000302190 CXCL6P80162 114 aa9.27□□□□□ -0.93
SDC2-201ENST00000302190 CSMD3Q7Z407 3707 aa9.27□□□□□ -0.93
SDC2-201ENST00000302190 PSPHP1O15172 72 aa9.26□□□□□ -0.93
SDC2-201ENST00000302190 LOC110117498A0A087WWA1 95 aa9.26□□□□□ -0.93
SDC2-201ENST00000302190 IGLV9-49A0A0B4J1Y8 123 aa9.25□□□□□ -0.93
SDC2-201ENST00000302190 LINC01556Q5JQF7 62 aa9.25□□□□□ -0.93
SDC2-201ENST00000302190 REG3GQ6UW15 175 aa9.25□□□□□ -0.93
SDC2-201ENST00000302190 LINC00588Q9Y4M8 146 aa9.23□□□□□ -0.93
SDC2-201ENST00000302190 LINC00528Q8N1L1 170 aa9.23□□□□□ -0.93
SDC2-201ENST00000302190 CHTF8P0CG12 524 aa9.23□□□□□ -0.93
SDC2-201ENST00000302190 LINC00208Q96KT6 92 aa9.22□□□□□ -0.93
SDC2-201ENST00000302190 SPINK6Q6UWN8 80 aa9.21□□□□□ -0.93
SDC2-201ENST00000302190 GVQW2A0A096LPI5 108 aaPredicted RBP9.2□□□□□ -0.94
SDC2-201ENST00000302190 SPTSSBQ8NFR3 76 aa9.2□□□□□ -0.94
SDC2-201ENST00000302190 NDUFB1O75438 58 aa9.2□□□□□ -0.94
SDC2-201ENST00000302190 RPL37AP61513 92 aaKnown RBP9.19□□□□□ -0.94
SDC2-201ENST00000302190 Q6ZRX8 168 aa9.19□□□□□ -0.94
SDC2-201ENST00000302190 Q8N377 158 aa9.19□□□□□ -0.94
SDC2-201ENST00000302190 Q9BRP9 147 aa9.19□□□□□ -0.94
SDC2-201ENST00000302190 MEGF8Q7Z7M0 2845 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms