RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 J3QR89 54 aa10.02□□□□□ -0.8
HERPUD1-201ENST00000300302 LINC00167Q96N53 147 aa10.02□□□□□ -0.8
HERPUD1-201ENST00000300302 IGLV1-50A0A075B6I6 118 aa10.02□□□□□ -0.81
HERPUD1-201ENST00000300302 ELOF1P60002 83 aaKnown RBP10.02□□□□□ -0.81
HERPUD1-201ENST00000300302 VPS25Q9BRG1 176 aa10.02□□□□□ -0.81
HERPUD1-201ENST00000300302 hADV29S1A0JD25 119 aa10.01□□□□□ -0.81
HERPUD1-201ENST00000300302 RPL37AP8A6NKH3 93 aa10.01□□□□□ -0.81
HERPUD1-201ENST00000300302 PRYO14603 147 aa10.01□□□□□ -0.81
HERPUD1-201ENST00000300302 ORMDL1Q9P0S3 153 aa10.01□□□□□ -0.81
HERPUD1-201ENST00000300302 SACSQ9NZJ4 4579 aa10□□□□□ -0.81
HERPUD1-201ENST00000300302 RTL8CO15255 209 aa10□□□□□ -0.81
HERPUD1-201ENST00000300302 A0A1W2PNN7 141 aa9.99□□□□□ -0.81
HERPUD1-201ENST00000300302 CHTF8P0CG12 524 aa9.99□□□□□ -0.81
HERPUD1-201ENST00000300302 IGLV5-52A0A0A0MRZ9 124 aa9.96□□□□□ -0.81
HERPUD1-201ENST00000300302 LINC00528Q8N1L1 170 aa9.96□□□□□ -0.81
HERPUD1-201ENST00000300302 TEX49A0A1B0GTD5 131 aa9.96□□□□□ -0.82
HERPUD1-201ENST00000300302 TNP2Q05952 138 aa9.96□□□□□ -0.82
HERPUD1-201ENST00000300302 DPH3Q96FX2 82 aa9.96□□□□□ -0.82
HERPUD1-201ENST00000300302 ETDCA0A1B0GVM5 59 aa9.95□□□□□ -0.82
HERPUD1-201ENST00000300302 TMEM256-PLSCR3K7ERE1 68 aa9.95□□□□□ -0.82
HERPUD1-201ENST00000300302 SPRR1AP35321 89 aa9.95□□□□□ -0.82
HERPUD1-201ENST00000300302 LCE6AA0A183 80 aa9.94□□□□□ -0.82
HERPUD1-201ENST00000300302 H3BQ85 93 aa9.93□□□□□ -0.82
HERPUD1-201ENST00000300302 GHRHP01286 108 aa9.93□□□□□ -0.82
HERPUD1-201ENST00000300302 REG3GQ6UW15 175 aa9.93□□□□□ -0.82
HERPUD1-201ENST00000300302 SPACA4Q8TDM5 124 aa9.93□□□□□ -0.82
HERPUD1-201ENST00000300302 INAFM2P0DMQ5 153 aa9.93□□□□□ -0.82
HERPUD1-201ENST00000300302 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.93□□□□□ -0.82
HERPUD1-201ENST00000300302 DNAH17Q9UFH2 4485 aa9.92□□□□□ -0.82
HERPUD1-201ENST00000300302 KRTAP4-16G5E9R7 235 aaPredicted RBP9.92□□□□□ -0.82
HERPUD1-201ENST00000300302 Q6ZQY7 126 aa9.92□□□□□ -0.82
HERPUD1-201ENST00000300302 Q6ZRX8 168 aa9.92□□□□□ -0.82
HERPUD1-201ENST00000300302 B5MCH6 92 aa9.91□□□□□ -0.82
HERPUD1-201ENST00000300302 FUSP35637 526 aaKnown RBP eCLIP9.91□□□□□ -0.82
HERPUD1-201ENST00000300302 DHRS4-AS1Q9P1J3 65 aa9.91□□□□□ -0.82
HERPUD1-201ENST00000300302 UBE2BP63146 152 aa9.91□□□□□ -0.82
HERPUD1-201ENST00000300302 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.91□□□□□ -0.82
HERPUD1-201ENST00000300302 PANO1I0J062 215 aa9.9□□□□□ -0.82
HERPUD1-201ENST00000300302 PHF5AQ7RTV0 110 aaKnown RBP9.9□□□□□ -0.82
HERPUD1-201ENST00000300302 FRAS1Q86XX4 4008 aa9.9□□□□□ -0.83
HERPUD1-201ENST00000300302 CDIP1Q9H305 208 aa9.89□□□□□ -0.83
HERPUD1-201ENST00000300302 EPM2AB3EWF7 344 aa9.87□□□□□ -0.83
HERPUD1-201ENST00000300302 JMJD7-PLA2G4BH0Y9G9 81 aa9.86□□□□□ -0.83
HERPUD1-201ENST00000300302 OBSCN-AS1Q96MR7 158 aa9.86□□□□□ -0.83
HERPUD1-201ENST00000300302 RYR2Q92736 4967 aa9.85□□□□□ -0.83
HERPUD1-201ENST00000300302 KMT2CQ8NEZ4 4911 aaKnown RBP9.85□□□□□ -0.83
HERPUD1-201ENST00000300302 FAM19A1Q7Z5A9 133 aa9.85□□□□□ -0.83
HERPUD1-201ENST00000300302 Q9BRP9 147 aa9.85□□□□□ -0.83
HERPUD1-201ENST00000300302 HECTD4Q9Y4D8 3996 aa9.84□□□□□ -0.83
HERPUD1-201ENST00000300302 KRTAP10-2P60368 255 aa9.83□□□□□ -0.84
HERPUD1-201ENST00000300302 LAMTOR3Q9UHA4 124 aa9.83□□□□□ -0.84
HERPUD1-201ENST00000300302 PLAC8Q9NZF1 115 aa9.83□□□□□ -0.84
HERPUD1-201ENST00000300302 FAT2Q9NYQ8 4349 aa9.81□□□□□ -0.84
HERPUD1-201ENST00000300302 SIGMAR1Q99720 223 aa9.81□□□□□ -0.84
HERPUD1-201ENST00000300302 DNAH11Q96DT5 4516 aa9.81□□□□□ -0.84
HERPUD1-201ENST00000300302 FAM240AA0A1B0GVK7 77 aa9.81□□□□□ -0.84
HERPUD1-201ENST00000300302 KRTAP11-1Q8IUC1 163 aa9.81□□□□□ -0.84
HERPUD1-201ENST00000300302 C14orf132Q9NPU4 83 aa9.81□□□□□ -0.84
HERPUD1-201ENST00000300302 H0Y9J4 135 aa9.8□□□□□ -0.84
HERPUD1-201ENST00000300302 A0A1B0GV72 72 aa9.79□□□□□ -0.84
HERPUD1-201ENST00000300302 PRLHP81277 87 aa9.79□□□□□ -0.84
HERPUD1-201ENST00000300302 XGP55808 180 aa9.79□□□□□ -0.84
HERPUD1-201ENST00000300302 RBM3P98179 157 aaKnown RBP9.79□□□□□ -0.84
HERPUD1-201ENST00000300302 SMCR5Q8TEV8 140 aa9.79□□□□□ -0.84
HERPUD1-201ENST00000300302 BCE1O60756 84 aa9.78□□□□□ -0.84
HERPUD1-201ENST00000300302 LINC00336Q6ZUF6 198 aa9.78□□□□□ -0.84
HERPUD1-201ENST00000300302 DEFB105AQ8NG35 78 aa9.78□□□□□ -0.84
HERPUD1-201ENST00000300302 ACYP1P07311 99 aa9.77□□□□□ -0.85
HERPUD1-201ENST00000300302 UBE2AP49459 152 aa9.77□□□□□ -0.85
HERPUD1-201ENST00000300302 NDUFV3P56181 108 aaKnown RBP9.77□□□□□ -0.85
HERPUD1-201ENST00000300302 ERC2-IT1O76042 136 aa9.76□□□□□ -0.85
HERPUD1-201ENST00000300302 GAGE2AQ6NT46 116 aa9.76□□□□□ -0.85
HERPUD1-201ENST00000300302 HIGD2AQ9BW72 106 aa9.76□□□□□ -0.85
HERPUD1-201ENST00000300302 IGLV5-48A0A075B6I7 105 aa9.75□□□□□ -0.85
HERPUD1-201ENST00000300302 MT-ATP8P03928 68 aa9.75□□□□□ -0.85
HERPUD1-201ENST00000300302 Q8N377 158 aa9.75□□□□□ -0.85
HERPUD1-201ENST00000300302 DSCR8Q96T75 97 aa9.75□□□□□ -0.85
HERPUD1-201ENST00000300302 LINC01547P58512 204 aaPredicted RBP9.74□□□□□ -0.85
HERPUD1-201ENST00000300302 ST20-AS1Q8NBB2 130 aa9.74□□□□□ -0.85
HERPUD1-201ENST00000300302 DNAH5Q8TE73 4624 aa9.73□□□□□ -0.85
HERPUD1-201ENST00000300302 LOC110117498A0A087WWA1 95 aa9.72□□□□□ -0.85
HERPUD1-201ENST00000300302 CCKP06307 115 aa9.72□□□□□ -0.85
HERPUD1-201ENST00000300302 PDE6GP18545 87 aa9.72□□□□□ -0.85
HERPUD1-201ENST00000300302 PCP4P48539 62 aa9.71□□□□□ -0.85
HERPUD1-201ENST00000300302 KRTAP10-1P60331 282 aa9.71□□□□□ -0.85
HERPUD1-201ENST00000300302 Q6ZSA8 131 aa9.71□□□□□ -0.85
HERPUD1-201ENST00000300302 FAM30AQ9NZY2 134 aa9.71□□□□□ -0.85
HERPUD1-201ENST00000300302 PKD1P98161 4303 aa9.7□□□□□ -0.86
HERPUD1-201ENST00000300302 PSORS1C2Q9UIG4 136 aa9.7□□□□□ -0.86
HERPUD1-201ENST00000300302 RYR3Q15413 4870 aa9.7□□□□□ -0.86
HERPUD1-201ENST00000300302 KRTAP13-1Q8IUC0 172 aa9.7□□□□□ -0.86
HERPUD1-201ENST00000300302 CIRBP-AS1Q8TBR5 109 aa9.7□□□□□ -0.86
HERPUD1-201ENST00000300302 C21orf62-AS1Q17RA5 79 aa9.69□□□□□ -0.86
HERPUD1-201ENST00000300302 Q6ZQT0 140 aa9.69□□□□□ -0.86
HERPUD1-201ENST00000300302 SCGB1A1P11684 91 aa9.68□□□□□ -0.86
HERPUD1-201ENST00000300302 TRBV7-4A0A0J9YYF1 115 aa9.68□□□□□ -0.86
HERPUD1-201ENST00000300302 C1orf137Q5JT78 98 aa9.67□□□□□ -0.86
HERPUD1-201ENST00000300302 SCXQ7RTU7 201 aa9.67□□□□□ -0.86
HERPUD1-201ENST00000300302 C3orf22Q8N5N4 141 aa9.66□□□□□ -0.86
HERPUD1-201ENST00000300302 F8WEM9 126 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms