RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 CSMD3Q7Z407 3707 aa9.32□□□□□ -0.92
C9orf3-202ENST00000297979 SLPIP03973 132 aa9.32□□□□□ -0.92
C9orf3-202ENST00000297979 Q6ZRP5 223 aa9.32□□□□□ -0.92
C9orf3-202ENST00000297979 LINC00474Q9P2X8 69 aa9.32□□□□□ -0.92
C9orf3-202ENST00000297979 A0A0A0MQY5 61 aa9.31□□□□□ -0.92
C9orf3-202ENST00000297979 FAM218AQ96MZ4 157 aa9.31□□□□□ -0.92
C9orf3-202ENST00000297979 H0YGX0 51 aa9.31□□□□□ -0.92
C9orf3-202ENST00000297979 PSCAO43653 123 aa9.31□□□□□ -0.92
C9orf3-202ENST00000297979 RPL18AQ02543 176 aaKnown RBP9.31□□□□□ -0.92
C9orf3-202ENST00000297979 NBDYA0A0U1RRE5 68 aa9.3□□□□□ -0.92
C9orf3-202ENST00000297979 TLX1NBP0CAT3 122 aa9.3□□□□□ -0.92
C9orf3-202ENST00000297979 LINC01600Q96MT4 127 aa9.3□□□□□ -0.92
C9orf3-202ENST00000297979 DNAH7Q8WXX0 4024 aa9.3□□□□□ -0.92
C9orf3-202ENST00000297979 LYSTQ99698 3801 aa9.29□□□□□ -0.92
C9orf3-202ENST00000297979 HIST1H4AP62805 103 aaKnown RBP9.28□□□□□ -0.92
C9orf3-202ENST00000297979 SERP2Q8N6R1 65 aa9.28□□□□□ -0.92
C9orf3-202ENST00000297979 PLECQ15149 4684 aaKnown RBP9.28□□□□□ -0.92
C9orf3-202ENST00000297979 IGLV6-57P01721 117 aa9.28□□□□□ -0.92
C9orf3-202ENST00000297979 TRBV7-6A0A0J9YX20 115 aa9.27□□□□□ -0.92
C9orf3-202ENST00000297979 C9orf129Q5T035 196 aaKnown RBP9.27□□□□□ -0.93
C9orf3-202ENST00000297979 A0A087WYN8 130 aa9.26□□□□□ -0.93
C9orf3-202ENST00000297979 STARD9Q9P2P6 4700 aa9.25□□□□□ -0.93
C9orf3-202ENST00000297979 LAMTOR3Q9UHA4 124 aa9.25□□□□□ -0.93
C9orf3-202ENST00000297979 TRBV10-3A0A0K0K1G6 114 aa9.25□□□□□ -0.93
C9orf3-202ENST00000297979 M0R378 163 aa9.25□□□□□ -0.93
C9orf3-202ENST00000297979 C6orf99Q4VX62 202 aa9.25□□□□□ -0.93
C9orf3-202ENST00000297979 KTN1-AS1Q86SY8 53 aa9.24□□□□□ -0.93
C9orf3-202ENST00000297979 DNAL4O96015 105 aa9.24□□□□□ -0.93
C9orf3-202ENST00000297979 RBM3P98179 157 aaKnown RBP9.24□□□□□ -0.93
C9orf3-202ENST00000297979 C14orf177Q52M58 125 aa9.24□□□□□ -0.93
C9orf3-202ENST00000297979 TRAV23DV6A0A075B6W5 121 aa9.23□□□□□ -0.93
C9orf3-202ENST00000297979 CNBPP62633 177 aaKnown RBP9.23□□□□□ -0.93
C9orf3-202ENST00000297979 PLA2G2DQ9UNK4 145 aa9.21□□□□□ -0.93
C9orf3-202ENST00000297979 BAALC-AS2P0C853 105 aa9.21□□□□□ -0.94
C9orf3-202ENST00000297979 Q6ZRN7 208 aaPredicted RBP9.21□□□□□ -0.94
C9orf3-202ENST00000297979 FBN3Q75N90 2809 aa9.21□□□□□ -0.94
C9orf3-202ENST00000297979 NKAPP1Q8N9T2 125 aa9.21□□□□□ -0.94
C9orf3-202ENST00000297979 TENM2Q9NT68 2774 aa9.21□□□□□ -0.94
C9orf3-202ENST00000297979 LINC00643Q86TS7 51 aa9.2□□□□□ -0.94
C9orf3-202ENST00000297979 M0R2N4 97 aa9.2□□□□□ -0.94
C9orf3-202ENST00000297979 DIRC1Q969H9 104 aa9.2□□□□□ -0.94
C9orf3-202ENST00000297979 VPS13DQ5THJ4 4388 aa9.19□□□□□ -0.94
C9orf3-202ENST00000297979 DNAH10Q8IVF4 4471 aa9.19□□□□□ -0.94
C9orf3-202ENST00000297979 LRCOL1A6NCL2 159 aa9.19□□□□□ -0.94
C9orf3-202ENST00000297979 ZNF73O43830 326 aaPredicted RBP9.18□□□□□ -0.94
C9orf3-202ENST00000297979 Q8N814 137 aa9.18□□□□□ -0.94
C9orf3-202ENST00000297979 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.18□□□□□ -0.94
C9orf3-202ENST00000297979 SMCR5Q8TEV8 140 aa9.18□□□□□ -0.94
C9orf3-202ENST00000297979 IGLV5-37A0A075B6J1 123 aa9.17□□□□□ -0.94
C9orf3-202ENST00000297979 LINC00575Q6W349 94 aa9.17□□□□□ -0.94
C9orf3-202ENST00000297979 WWC2-AS2Q96NR7 200 aa9.17□□□□□ -0.94
C9orf3-202ENST00000297979 FAM168BA1KXE4 195 aa9.17□□□□□ -0.94
C9orf3-202ENST00000297979 MPLKIPQ8TAP9 179 aa9.17□□□□□ -0.94
C9orf3-202ENST00000297979 LINC00167Q96N53 147 aa9.17□□□□□ -0.94
C9orf3-202ENST00000297979 CCKP06307 115 aa9.16□□□□□ -0.94
C9orf3-202ENST00000297979 C7orf33Q8WU49 177 aa9.16□□□□□ -0.94
C9orf3-202ENST00000297979 ORMDL1Q9P0S3 153 aa9.16□□□□□ -0.94
C9orf3-202ENST00000297979 C22orf24Q9Y442 160 aa9.15□□□□□ -0.94
C9orf3-202ENST00000297979 Q6ZR54 194 aa9.15□□□□□ -0.94
C9orf3-202ENST00000297979 C16orf90A8MZG2 172 aa9.14□□□□□ -0.95
C9orf3-202ENST00000297979 A0A096LNI7 61 aa9.14□□□□□ -0.95
C9orf3-202ENST00000297979 COX7BP24311 80 aa9.14□□□□□ -0.95
C9orf3-202ENST00000297979 ELOF1P60002 83 aaKnown RBP9.13□□□□□ -0.95
C9orf3-202ENST00000297979 KRTAP7-1Q8IUC3 87 aa9.13□□□□□ -0.95
C9orf3-202ENST00000297979 KCNQ1DNQ9H478 68 aa9.13□□□□□ -0.95
C9orf3-202ENST00000297979 ACYP1P07311 99 aa9.13□□□□□ -0.95
C9orf3-202ENST00000297979 TMEM256-PLSCR3K7ERE1 68 aa9.12□□□□□ -0.95
C9orf3-202ENST00000297979 IGKV2-24A0A0C4DH68 120 aa9.11□□□□□ -0.95
C9orf3-202ENST00000297979 LY6G6CO95867 125 aa9.11□□□□□ -0.95
C9orf3-202ENST00000297979 C9orf163Q8N9P6 203 aa9.11□□□□□ -0.95
C9orf3-202ENST00000297979 IGLV1-50A0A075B6I6 118 aa9.1□□□□□ -0.95
C9orf3-202ENST00000297979 RPL37AP8A6NKH3 93 aa9.09□□□□□ -0.95
C9orf3-202ENST00000297979 A8MUN3 132 aa9.09□□□□□ -0.95
C9orf3-202ENST00000297979 H7BZZ5 65 aa9.09□□□□□ -0.95
C9orf3-202ENST00000297979 A0A087WTM6 91 aa9.09□□□□□ -0.95
C9orf3-202ENST00000297979 PRYO14603 147 aa9.09□□□□□ -0.95
C9orf3-202ENST00000297979 LINC00528Q8N1L1 170 aa9.09□□□□□ -0.96
C9orf3-202ENST00000297979 LINC00476Q8WZB0 136 aa9.09□□□□□ -0.96
C9orf3-202ENST00000297979 C1orf134Q5TEV5 83 aa9.07□□□□□ -0.96
C9orf3-202ENST00000297979 Q6ZQY7 126 aa9.07□□□□□ -0.96
C9orf3-202ENST00000297979 SDIM1Q6ZPB5 146 aa9.06□□□□□ -0.96
C9orf3-202ENST00000297979 OBSCN-AS1Q96MR7 158 aa9.06□□□□□ -0.96
C9orf3-202ENST00000297979 A0A1W2PNN7 141 aa9.06□□□□□ -0.96
C9orf3-202ENST00000297979 C3orf84H3BNL1 204 aa9.05□□□□□ -0.96
C9orf3-202ENST00000297979 CHTF8P0CG12 524 aa9.05□□□□□ -0.96
C9orf3-202ENST00000297979 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.05□□□□□ -0.96
C9orf3-202ENST00000297979 C20orf197Q8N268 126 aa9.05□□□□□ -0.96
C9orf3-202ENST00000297979 SPRR1AP35321 89 aa9.05□□□□□ -0.96
C9orf3-202ENST00000297979 H3BQ85 93 aa9.04□□□□□ -0.96
C9orf3-202ENST00000297979 FAM229BQ4G0N7 80 aa9.04□□□□□ -0.96
C9orf3-202ENST00000297979 TGP01266 2768 aa9.03□□□□□ -0.96
C9orf3-202ENST00000297979 ETDCA0A1B0GVM5 59 aa9.03□□□□□ -0.96
C9orf3-202ENST00000297979 KRTAP4-16G5E9R7 235 aaPredicted RBP9.03□□□□□ -0.96
C9orf3-202ENST00000297979 NDUFS5O43920 106 aa9.02□□□□□ -0.97
C9orf3-202ENST00000297979 Q6ZRX8 168 aa9.02□□□□□ -0.97
C9orf3-202ENST00000297979 C14orf132Q9NPU4 83 aa9.02□□□□□ -0.97
C9orf3-202ENST00000297979 KMT2AQ03164 3969 aa9.02□□□□□ -0.97
C9orf3-202ENST00000297979 JMJD7-PLA2G4BH0Y9G9 81 aa9.02□□□□□ -0.97
C9orf3-202ENST00000297979 GHRHP01286 108 aa9.02□□□□□ -0.97
C9orf3-202ENST00000297979 REG3GQ6UW15 175 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms