RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 IGKV2D-30A0A075B6S6 120 aa3.37□□□□□ -1.87
CSMD3-201ENST00000297405 IGKV2-30P06310 120 aa3.37□□□□□ -1.87
CSMD3-201ENST00000297405 COX6A2Q02221 97 aa3.37□□□□□ -1.87
CSMD3-201ENST00000297405 LINC00167Q96N53 147 aa3.37□□□□□ -1.87
CSMD3-201ENST00000297405 CIRBP-AS1Q8TBR5 109 aa3.36□□□□□ -1.87
CSMD3-201ENST00000297405 C11orf21Q9P2W6 132 aa3.36□□□□□ -1.87
CSMD3-201ENST00000297405 NIPBLQ6KC79 2804 aaeCLIP3.36□□□□□ -1.87
CSMD3-201ENST00000297405 PLA2G2CQ5R387 149 aa3.36□□□□□ -1.87
CSMD3-201ENST00000297405 KCNQ1DNQ9H478 68 aa3.36□□□□□ -1.87
CSMD3-201ENST00000297405 OBSCN-AS1Q96MR7 158 aa3.36□□□□□ -1.87
CSMD3-201ENST00000297405 A0A096LNI7 61 aa3.36□□□□□ -1.87
CSMD3-201ENST00000297405 U3KQA8 63 aa3.36□□□□□ -1.87
CSMD3-201ENST00000297405 KIAA0087Q14695 138 aa3.35□□□□□ -1.87
CSMD3-201ENST00000297405 X6R8D5 127 aa3.35□□□□□ -1.87
CSMD3-201ENST00000297405 LMO4P61968 165 aa3.35□□□□□ -1.87
CSMD3-201ENST00000297405 LINC00483Q53H64 154 aa3.35□□□□□ -1.87
CSMD3-201ENST00000297405 PRR9Q5T870 116 aa3.35□□□□□ -1.87
CSMD3-201ENST00000297405 SEC61BP60468 96 aaKnown RBP3.35□□□□□ -1.87
CSMD3-201ENST00000297405 LINC01556Q5JQF7 62 aa3.35□□□□□ -1.87
CSMD3-201ENST00000297405 MRPL34Q9BQ48 92 aaKnown RBP3.35□□□□□ -1.87
CSMD3-201ENST00000297405 CRYBG3Q68DQ2 2970 aa3.35□□□□□ -1.87
CSMD3-201ENST00000297405 ADORA2A-AS1P86434 159 aa3.34□□□□□ -1.87
CSMD3-201ENST00000297405 LINC00476Q8WZB0 136 aa3.34□□□□□ -1.87
CSMD3-201ENST00000297405 BBC3Q96PG8 261 aaPredicted RBP3.34□□□□□ -1.87
CSMD3-201ENST00000297405 SMCR5Q8TEV8 140 aa3.34□□□□□ -1.88
CSMD3-201ENST00000297405 FAM104AQ969W3 186 aa3.33□□□□□ -1.88
CSMD3-201ENST00000297405 TMEM105Q8N8V8 129 aa3.33□□□□□ -1.88
CSMD3-201ENST00000297405 OCR1Q9BZK8 76 aa3.33□□□□□ -1.88
CSMD3-201ENST00000297405 GAS8-AS1O95177 125 aa3.33□□□□□ -1.88
CSMD3-201ENST00000297405 SPINK1P00995 79 aa3.33□□□□□ -1.88
CSMD3-201ENST00000297405 C1orf229Q6ZS94 237 aaPredicted RBP3.33□□□□□ -1.88
CSMD3-201ENST00000297405 FLNCQ14315 2725 aa3.32□□□□□ -1.88
CSMD3-201ENST00000297405 IGLV1-51P01701 117 aa3.32□□□□□ -1.88
CSMD3-201ENST00000297405 FHL3Q13643 280 aa3.32□□□□□ -1.88
CSMD3-201ENST00000297405 CSNK1G2-AS1Q8NCQ2 148 aa3.32□□□□□ -1.88
CSMD3-201ENST00000297405 LINC01006Q8NI28 216 aa3.32□□□□□ -1.88
CSMD3-201ENST00000297405 C16orf90A8MZG2 172 aa3.32□□□□□ -1.88
CSMD3-201ENST00000297405 PRR3P79522 188 aaKnown RBP3.32□□□□□ -1.88
CSMD3-201ENST00000297405 IGLV7-46A0A075B6I9 117 aa3.32□□□□□ -1.88
CSMD3-201ENST00000297405 FAM218AQ96MZ4 157 aa3.32□□□□□ -1.88
CSMD3-201ENST00000297405 PLA2G2DQ9UNK4 145 aa3.32□□□□□ -1.88
CSMD3-201ENST00000297405 C8orf17Q9NRJ1 99 aa3.32□□□□□ -1.88
CSMD3-201ENST00000297405 TENM1Q9UKZ4 2725 aa3.31□□□□□ -1.88
CSMD3-201ENST00000297405 GRNP28799 593 aaKnown RBP3.31□□□□□ -1.88
CSMD3-201ENST00000297405 IGLV7-43P04211 117 aa3.31□□□□□ -1.88
CSMD3-201ENST00000297405 LINC01558Q9Y6Z2 57 aa3.31□□□□□ -1.88
CSMD3-201ENST00000297405 EP400Q96L91 3159 aa3.31□□□□□ -1.88
CSMD3-201ENST00000297405 LITAFQ99732 161 aa3.31□□□□□ -1.88
CSMD3-201ENST00000297405 A0A1B0GVX0 72 aa3.31□□□□□ -1.88
CSMD3-201ENST00000297405 WISP2O76076 250 aa3.31□□□□□ -1.88
CSMD3-201ENST00000297405 KRTAP16-1A8MUX0 517 aa3.3□□□□□ -1.88
CSMD3-201ENST00000297405 K7EQZ3 153 aa3.3□□□□□ -1.88
CSMD3-201ENST00000297405 C22orf24Q9Y442 160 aa3.3□□□□□ -1.88
CSMD3-201ENST00000297405 PROK1P58294 105 aa3.3□□□□□ -1.88
CSMD3-201ENST00000297405 KLK9Q2XQG4 91 aa3.3□□□□□ -1.88
CSMD3-201ENST00000297405 LINC00528Q8N1L1 170 aa3.3□□□□□ -1.88
CSMD3-201ENST00000297405 TACC2O95359 2948 aa3.29□□□□□ -1.88
CSMD3-201ENST00000297405 LINC00315P59091 139 aa3.29□□□□□ -1.88
CSMD3-201ENST00000297405 C1orf134Q5TEV5 83 aa3.29□□□□□ -1.88
CSMD3-201ENST00000297405 DEFB1P60022 68 aa3.29□□□□□ -1.88
CSMD3-201ENST00000297405 IGLV5-48A0A075B6I7 105 aa3.28□□□□□ -1.88
CSMD3-201ENST00000297405 SPRR4Q96PI1 79 aa3.28□□□□□ -1.88
CSMD3-201ENST00000297405 TRIOO75962 3097 aa3.28□□□□□ -1.88
CSMD3-201ENST00000297405 LINC00588Q9Y4M8 146 aa3.28□□□□□ -1.88
CSMD3-201ENST00000297405 ODF3L2Q3SX64 289 aa3.28□□□□□ -1.88
CSMD3-201ENST00000297405 Q5XG85 94 aa3.28□□□□□ -1.88
CSMD3-201ENST00000297405 C15orf56Q8N910 161 aa3.28□□□□□ -1.89
CSMD3-201ENST00000297405 Q8N9P0 234 aaPredicted RBP3.27□□□□□ -1.89
CSMD3-201ENST00000297405 PLA2G1BP04054 148 aaKnown RBP3.27□□□□□ -1.89
CSMD3-201ENST00000297405 C5orf42Q9H799 3197 aa3.27□□□□□ -1.89
CSMD3-201ENST00000297405 IGLV5-52A0A0A0MRZ9 124 aa3.27□□□□□ -1.89
CSMD3-201ENST00000297405 A8MTW9 85 aa3.27□□□□□ -1.89
CSMD3-201ENST00000297405 DMXL2Q8TDJ6 3036 aa3.27□□□□□ -1.89
CSMD3-201ENST00000297405 VPS13AQ96RL7 3174 aa3.27□□□□□ -1.89
CSMD3-201ENST00000297405 FRYQ5TBA9 3013 aa3.26□□□□□ -1.89
CSMD3-201ENST00000297405 DEFB4AO15263 64 aa3.26□□□□□ -1.89
CSMD3-201ENST00000297405 TLX1NBP0CAT3 122 aa3.26□□□□□ -1.89
CSMD3-201ENST00000297405 COX6B2Q6YFQ2 88 aa3.26□□□□□ -1.89
CSMD3-201ENST00000297405 ASH1LQ9NR48 2969 aaKnown RBP3.26□□□□□ -1.89
CSMD3-201ENST00000297405 C9orf129Q5T035 196 aaKnown RBP3.26□□□□□ -1.89
CSMD3-201ENST00000297405 IGLV8-61A0A075B6I0 122 aa3.26□□□□□ -1.89
CSMD3-201ENST00000297405 J3QKU1 62 aa3.25□□□□□ -1.89
CSMD3-201ENST00000297405 DNAH10OSP0CZ25 163 aa3.25□□□□□ -1.89
CSMD3-201ENST00000297405 Q8NAQ8 132 aa3.25□□□□□ -1.89
CSMD3-201ENST00000297405 C16orf95Q9H693 158 aa3.25□□□□□ -1.89
CSMD3-201ENST00000297405 ST20-AS1Q8NBB2 130 aa3.24□□□□□ -1.89
CSMD3-201ENST00000297405 A0A1B0GU33 70 aa3.24□□□□□ -1.89
CSMD3-201ENST00000297405 DEFB116Q30KQ4 102 aa3.24□□□□□ -1.89
CSMD3-201ENST00000297405 FP248Q71RG6 208 aaPredicted RBP3.23□□□□□ -1.89
CSMD3-201ENST00000297405 IGLV1-50A0A075B6I6 118 aa3.23□□□□□ -1.89
CSMD3-201ENST00000297405 LY6G6CO95867 125 aa3.23□□□□□ -1.89
CSMD3-201ENST00000297405 TNRC18O15417 2968 aaPredicted RBP3.23□□□□□ -1.89
CSMD3-201ENST00000297405 PRR34Q9NV39 138 aa3.22□□□□□ -1.89
CSMD3-201ENST00000297405 Q5VV11 94 aa3.22□□□□□ -1.89
CSMD3-201ENST00000297405 COL12A1Q99715 3063 aa3.22□□□□□ -1.89
CSMD3-201ENST00000297405 MAPK1IP1LQ8NDC0 245 aa3.22□□□□□ -1.89
CSMD3-201ENST00000297405 TGP01266 2768 aa3.21□□□□□ -1.89
CSMD3-201ENST00000297405 APLNQ9ULZ1 77 aa3.21□□□□□ -1.9
CSMD3-201ENST00000297405 Q8NA96 180 aa3.21□□□□□ -1.9
CSMD3-201ENST00000297405 DCHS2Q6V1P9 2916 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms