RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 LINC00528Q8N1L1 170 aa9.06□□□□□ -0.96
NXF1-201ENST00000294172 PSCAO43653 123 aa9.06□□□□□ -0.96
NXF1-201ENST00000294172 KCNQ1DNQ9H478 68 aa9.05□□□□□ -0.96
NXF1-201ENST00000294172 PLECQ15149 4684 aaKnown RBP9.04□□□□□ -0.96
NXF1-201ENST00000294172 H3BQ85 93 aa9.04□□□□□ -0.96
NXF1-201ENST00000294172 DSCR8Q96T75 97 aa9.04□□□□□ -0.96
NXF1-201ENST00000294172 PLA2G2DQ9UNK4 145 aa9.04□□□□□ -0.96
NXF1-201ENST00000294172 DNAH7Q8WXX0 4024 aa9.03□□□□□ -0.96
NXF1-201ENST00000294172 A0A087WVE0 104 aa9.03□□□□□ -0.96
NXF1-201ENST00000294172 FAM19A5Q7Z5A7 132 aaPredicted RBP9.03□□□□□ -0.96
NXF1-201ENST00000294172 C3orf22Q8N5N4 141 aa9.03□□□□□ -0.96
NXF1-201ENST00000294172 DYNC2H1Q8NCM8 4307 aaKnown RBP9.03□□□□□ -0.96
NXF1-201ENST00000294172 LOC107984640A0A0U1RRK4 108 aa9.03□□□□□ -0.96
NXF1-201ENST00000294172 GHRHP01286 108 aa9.03□□□□□ -0.96
NXF1-201ENST00000294172 HIST1H4AP62805 103 aaKnown RBP9.03□□□□□ -0.96
NXF1-201ENST00000294172 Q6ZQT0 140 aa9.03□□□□□ -0.96
NXF1-201ENST00000294172 KRTAP7-1Q8IUC3 87 aa9.02□□□□□ -0.97
NXF1-201ENST00000294172 LOC110117498A0A087WWA1 95 aa9.01□□□□□ -0.97
NXF1-201ENST00000294172 ATOX1O00244 68 aa9.01□□□□□ -0.97
NXF1-201ENST00000294172 UQCRQO14949 82 aa9.01□□□□□ -0.97
NXF1-201ENST00000294172 C9orf153Q5TBE3 101 aa9.01□□□□□ -0.97
NXF1-201ENST00000294172 IGLV1-50A0A075B6I6 118 aa9□□□□□ -0.97
NXF1-201ENST00000294172 M0R2N4 97 aa9□□□□□ -0.97
NXF1-201ENST00000294172 IGLV5-37A0A075B6J1 123 aa8.99□□□□□ -0.97
NXF1-201ENST00000294172 MRPL55Q7Z7F7 128 aaKnown RBP8.99□□□□□ -0.97
NXF1-201ENST00000294172 DEFB105AQ8NG35 78 aa8.99□□□□□ -0.97
NXF1-201ENST00000294172 PRKDCP78527 4128 aaKnown RBP8.99□□□□□ -0.97
NXF1-201ENST00000294172 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.99□□□□□ -0.97
NXF1-201ENST00000294172 COX7CP15954 63 aa8.99□□□□□ -0.97
NXF1-201ENST00000294172 UBL5Q9BZL1 73 aa8.99□□□□□ -0.97
NXF1-201ENST00000294172 IGKV2-24A0A0C4DH68 120 aa8.98□□□□□ -0.97
NXF1-201ENST00000294172 ETDCA0A1B0GVM5 59 aa8.97□□□□□ -0.97
NXF1-201ENST00000294172 NUPR2A6NF83 97 aa8.97□□□□□ -0.97
NXF1-201ENST00000294172 PRYO14603 147 aa8.97□□□□□ -0.97
NXF1-201ENST00000294172 DNHD1Q96M86 4753 aa8.96□□□□□ -0.97
NXF1-201ENST00000294172 A0A096LNI7 61 aa8.96□□□□□ -0.97
NXF1-201ENST00000294172 PDE6GP18545 87 aa8.96□□□□□ -0.97
NXF1-201ENST00000294172 Q6ZRX8 168 aa8.96□□□□□ -0.97
NXF1-201ENST00000294172 ATP5EP2Q5VTU8 51 aa8.96□□□□□ -0.98
NXF1-201ENST00000294172 CNBPP62633 177 aaKnown RBP8.95□□□□□ -0.98
NXF1-201ENST00000294172 MEGF8Q7Z7M0 2845 aa8.95□□□□□ -0.98
NXF1-201ENST00000294172 TRBV7-4A0A0J9YYF1 115 aa8.94□□□□□ -0.98
NXF1-201ENST00000294172 KRTAP4-16G5E9R7 235 aaPredicted RBP8.94□□□□□ -0.98
NXF1-201ENST00000294172 FAM19A1Q7Z5A9 133 aa8.94□□□□□ -0.98
NXF1-201ENST00000294172 Q9BRP9 147 aa8.94□□□□□ -0.98
NXF1-201ENST00000294172 DHRS4-AS1Q9P1J3 65 aa8.94□□□□□ -0.98
NXF1-201ENST00000294172 STARD9Q9P2P6 4700 aa8.94□□□□□ -0.98
NXF1-201ENST00000294172 NBDYA0A0U1RRE5 68 aa8.93□□□□□ -0.98
NXF1-201ENST00000294172 C16orf90A8MZG2 172 aa8.93□□□□□ -0.98
NXF1-201ENST00000294172 SPRR1AP35321 89 aa8.93□□□□□ -0.98
NXF1-201ENST00000294172 C14orf177Q52M58 125 aa8.92□□□□□ -0.98
NXF1-201ENST00000294172 Q8N377 158 aa8.92□□□□□ -0.98
NXF1-201ENST00000294172 A0A1W2PNN7 141 aa8.92□□□□□ -0.98
NXF1-201ENST00000294172 REG3GQ6UW15 175 aa8.91□□□□□ -0.98
NXF1-201ENST00000294172 SMIM20Q8N5G0 67 aa8.91□□□□□ -0.98
NXF1-201ENST00000294172 SERP2Q8N6R1 65 aa8.91□□□□□ -0.98
NXF1-201ENST00000294172 UBE2BP63146 152 aa8.91□□□□□ -0.98
NXF1-201ENST00000294172 C5orf47Q569G3 176 aa8.91□□□□□ -0.98
NXF1-201ENST00000294172 ST20-AS1Q8NBB2 130 aa8.91□□□□□ -0.98
NXF1-201ENST00000294172 CRYGAP11844 174 aa8.9□□□□□ -0.98
NXF1-201ENST00000294172 HAMPP81172 84 aa8.9□□□□□ -0.98
NXF1-201ENST00000294172 Q6ZVQ6 151 aa8.9□□□□□ -0.98
NXF1-201ENST00000294172 CHTF8P0CG12 524 aa8.89□□□□□ -0.99
NXF1-201ENST00000294172 LINC01547P58512 204 aaPredicted RBP8.89□□□□□ -0.99
NXF1-201ENST00000294172 ERC2-IT1O76042 136 aa8.88□□□□□ -0.99
NXF1-201ENST00000294172 LRCOL1A6NCL2 159 aa8.87□□□□□ -0.99
NXF1-201ENST00000294172 VPS13DQ5THJ4 4388 aa8.86□□□□□ -0.99
NXF1-201ENST00000294172 CYSTM1Q9H1C7 97 aa8.86□□□□□ -0.99
NXF1-201ENST00000294172 PRLHP81277 87 aa8.84□□□□□ -0.99
NXF1-201ENST00000294172 Q6ZRN7 208 aaPredicted RBP8.84□□□□□ -0.99
NXF1-201ENST00000294172 C9orf163Q8N9P6 203 aa8.84□□□□□ -0.99
NXF1-201ENST00000294172 PHF5AQ7RTV0 110 aaKnown RBP8.83□□□□□ -1
NXF1-201ENST00000294172 IGLV5-48A0A075B6I7 105 aa8.83□□□□□ -1
NXF1-201ENST00000294172 SCXQ7RTU7 201 aa8.83□□□□□ -1
NXF1-201ENST00000294172 C3orf84H3BNL1 204 aa8.82□□□□□ -1
NXF1-201ENST00000294172 CXCL6P80162 114 aa8.81□□□□□ -1
NXF1-201ENST00000294172 DPH3Q96FX2 82 aa8.81□□□□□ -1
NXF1-201ENST00000294172 HIGD2AQ9BW72 106 aa8.81□□□□□ -1
NXF1-201ENST00000294172 KRTAP11-1Q8IUC1 163 aa8.8□□□□□ -1
NXF1-201ENST00000294172 C1orf137Q5JT78 98 aa8.79□□□□□ -1
NXF1-201ENST00000294172 SRRM2Q9UQ35 2752 aaKnown RBP8.79□□□□□ -1
NXF1-201ENST00000294172 KMT2AQ03164 3969 aa8.78□□□□□ -1
NXF1-201ENST00000294172 TGP01266 2768 aa8.78□□□□□ -1
NXF1-201ENST00000294172 PANO1I0J062 215 aa8.78□□□□□ -1
NXF1-201ENST00000294172 TNP2Q05952 138 aa8.78□□□□□ -1
NXF1-201ENST00000294172 NREPQ16612 68 aa8.78□□□□□ -1
NXF1-201ENST00000294172 FUSP35637 526 aaKnown RBP eCLIP8.77□□□□□ -1
NXF1-201ENST00000294172 PKIGQ9Y2B9 76 aa8.77□□□□□ -1.01
NXF1-201ENST00000294172 LINC00474Q9P2X8 69 aa8.76□□□□□ -1.01
NXF1-201ENST00000294172 DNAH2Q9P225 4427 aa8.76□□□□□ -1.01
NXF1-201ENST00000294172 A0A1W2PNM2 257 aa8.76□□□□□ -1.01
NXF1-201ENST00000294172 SMIM29Q86T20 159 aa8.75□□□□□ -1.01
NXF1-201ENST00000294172 A0A087WTM6 91 aa8.75□□□□□ -1.01
NXF1-201ENST00000294172 F8WEM9 126 aa8.75□□□□□ -1.01
NXF1-201ENST00000294172 TMEM258P61165 79 aa8.75□□□□□ -1.01
NXF1-201ENST00000294172 C20orf197Q8N268 126 aa8.75□□□□□ -1.01
NXF1-201ENST00000294172 FBN3Q75N90 2809 aa8.74□□□□□ -1.01
NXF1-201ENST00000294172 EPM2AB3EWF7 344 aa8.74□□□□□ -1.01
NXF1-201ENST00000294172 TRAV7A0A075B6U4 112 aa8.73□□□□□ -1.01
NXF1-201ENST00000294172 BCE1O60756 84 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms