RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 LINC00336Q6ZUF6 198 aa9.71□□□□□ -0.85
CCNF-201ENST00000293968 NDUFC1O43677 76 aa9.71□□□□□ -0.86
CCNF-201ENST00000293968 FUSP35637 526 aaKnown RBP eCLIP9.71□□□□□ -0.86
CCNF-201ENST00000293968 C15orf56Q8N910 161 aa9.7□□□□□ -0.86
CCNF-201ENST00000293968 HIGD2AQ9BW72 106 aa9.7□□□□□ -0.86
CCNF-201ENST00000293968 TENM1Q9UKZ4 2725 aa9.69□□□□□ -0.86
CCNF-201ENST00000293968 BRK1Q8WUW1 75 aa9.69□□□□□ -0.86
CCNF-201ENST00000293968 TENM4Q6N022 2769 aa9.69□□□□□ -0.86
CCNF-201ENST00000293968 IGKV4-1P06312 121 aa9.69□□□□□ -0.86
CCNF-201ENST00000293968 ETDCA0A1B0GVM5 59 aa9.68□□□□□ -0.86
CCNF-201ENST00000293968 ESRGQ1W209 222 aa9.68□□□□□ -0.86
CCNF-201ENST00000293968 PRYO14603 147 aa9.68□□□□□ -0.86
CCNF-201ENST00000293968 OXLD1Q5BKU9 147 aa9.68□□□□□ -0.86
CCNF-201ENST00000293968 SERTAD4-AS1Q5TG53 156 aa9.68□□□□□ -0.86
CCNF-201ENST00000293968 MRAPQ8TCY5 172 aa9.68□□□□□ -0.86
CCNF-201ENST00000293968 C7orf33Q8WU49 177 aa9.68□□□□□ -0.86
CCNF-201ENST00000293968 PRB2P02812 416 aaPredicted RBP9.67□□□□□ -0.86
CCNF-201ENST00000293968 PKIGQ9Y2B9 76 aa9.67□□□□□ -0.86
CCNF-201ENST00000293968 HIVEP1P15822 2718 aa9.67□□□□□ -0.86
CCNF-201ENST00000293968 LRCOL1A6NCL2 159 aa9.67□□□□□ -0.86
CCNF-201ENST00000293968 FP248Q71RG6 208 aaPredicted RBP9.66□□□□□ -0.86
CCNF-201ENST00000293968 UBE2BP63146 152 aa9.66□□□□□ -0.86
CCNF-201ENST00000293968 SMIM29Q86T20 159 aa9.66□□□□□ -0.86
CCNF-201ENST00000293968 PDZD2O15018 2839 aa9.65□□□□□ -0.86
CCNF-201ENST00000293968 Q8N377 158 aa9.64□□□□□ -0.87
CCNF-201ENST00000293968 ST20-AS1Q8NBB2 130 aa9.64□□□□□ -0.87
CCNF-201ENST00000293968 A0A0U1RQV1 116 aa9.64□□□□□ -0.87
CCNF-201ENST00000293968 FAM168BA1KXE4 195 aa9.64□□□□□ -0.87
CCNF-201ENST00000293968 C1orf137Q5JT78 98 aa9.63□□□□□ -0.87
CCNF-201ENST00000293968 J3QKU1 62 aa9.63□□□□□ -0.87
CCNF-201ENST00000293968 ANK3Q12955 4377 aaKnown RBP9.63□□□□□ -0.87
CCNF-201ENST00000293968 DEFB131BA0A096LNP1 70 aa9.62□□□□□ -0.87
CCNF-201ENST00000293968 PRR4Q16378 134 aa9.62□□□□□ -0.87
CCNF-201ENST00000293968 WIPF1O43516 503 aa9.62□□□□□ -0.87
CCNF-201ENST00000293968 ATP5EP56381 51 aaPredicted RBP9.62□□□□□ -0.87
CCNF-201ENST00000293968 PRO0628Q9UI54 55 aa9.61□□□□□ -0.87
CCNF-201ENST00000293968 FAM229BQ4G0N7 80 aa9.6□□□□□ -0.87
CCNF-201ENST00000293968 PKD1L1Q8TDX9 2849 aa9.6□□□□□ -0.87
CCNF-201ENST00000293968 OCR1Q9BZK8 76 aa9.6□□□□□ -0.87
CCNF-201ENST00000293968 KRTAP26-1Q6PEX3 210 aa9.6□□□□□ -0.87
CCNF-201ENST00000293968 A0A0G2JQZ4 141 aa9.59□□□□□ -0.87
CCNF-201ENST00000293968 A0A1W2PNN7 141 aa9.59□□□□□ -0.87
CCNF-201ENST00000293968 DEFB116Q30KQ4 102 aa9.59□□□□□ -0.87
CCNF-201ENST00000293968 DHRS4-AS1Q9P1J3 65 aa9.58□□□□□ -0.88
CCNF-201ENST00000293968 KCNQ1DNQ9H478 68 aa9.58□□□□□ -0.88
CCNF-201ENST00000293968 BAHCC1Q9P281 2608 aa9.57□□□□□ -0.88
CCNF-201ENST00000293968 EPM2AB3EWF7 344 aa9.57□□□□□ -0.88
CCNF-201ENST00000293968 C11orf45Q8TAV5 145 aa9.57□□□□□ -0.88
CCNF-201ENST00000293968 TRRAPQ9Y4A5 3859 aa9.57□□□□□ -0.88
CCNF-201ENST00000293968 A0A1W2PNM2 257 aa9.57□□□□□ -0.88
CCNF-201ENST00000293968 Q6ZRX8 168 aa9.56□□□□□ -0.88
CCNF-201ENST00000293968 Q9BRP9 147 aa9.55□□□□□ -0.88
CCNF-201ENST00000293968 ERC2-IT1O76042 136 aa9.54□□□□□ -0.88
CCNF-201ENST00000293968 LINC01556Q5JQF7 62 aa9.54□□□□□ -0.88
CCNF-201ENST00000293968 CASC10Q5T4H9 136 aa9.54□□□□□ -0.88
CCNF-201ENST00000293968 WFDC13Q8IUB5 93 aa9.53□□□□□ -0.88
CCNF-201ENST00000293968 K7EQZ3 153 aa9.53□□□□□ -0.88
CCNF-201ENST00000293968 NSD1Q96L73 2696 aaPredicted RBP9.53□□□□□ -0.88
CCNF-201ENST00000293968 IGKV2-24A0A0C4DH68 120 aa9.53□□□□□ -0.88
CCNF-201ENST00000293968 Q8NBF4 154 aa9.52□□□□□ -0.89
CCNF-201ENST00000293968 IGLV5-48A0A075B6I7 105 aa9.52□□□□□ -0.89
CCNF-201ENST00000293968 OTOGQ6ZRI0 2925 aa9.51□□□□□ -0.89
CCNF-201ENST00000293968 NOTCH1P46531 2555 aa9.51□□□□□ -0.89
CCNF-201ENST00000293968 FLNBO75369 2602 aaKnown RBP9.5□□□□□ -0.89
CCNF-201ENST00000293968 H3BNG1 76 aa9.5□□□□□ -0.89
CCNF-201ENST00000293968 KRTAP10-11P60412 298 aa9.5□□□□□ -0.89
CCNF-201ENST00000293968 TENM3Q9P273 2699 aa9.5□□□□□ -0.89
CCNF-201ENST00000293968 MRPL55Q7Z7F7 128 aaKnown RBP9.49□□□□□ -0.89
CCNF-201ENST00000293968 IGLV1-50A0A075B6I6 118 aa9.49□□□□□ -0.89
CCNF-201ENST00000293968 MAST4O15021 2626 aa9.49□□□□□ -0.89
CCNF-201ENST00000293968 PRLHP81277 87 aa9.47□□□□□ -0.89
CCNF-201ENST00000293968 DSCR10P59022 87 aa9.46□□□□□ -0.9
CCNF-201ENST00000293968 LINC00476Q8WZB0 136 aa9.45□□□□□ -0.9
CCNF-201ENST00000293968 PSCAO43653 123 aa9.45□□□□□ -0.9
CCNF-201ENST00000293968 A0A087WSZ3 146 aa9.45□□□□□ -0.9
CCNF-201ENST00000293968 PSPHP1O15172 72 aa9.45□□□□□ -0.9
CCNF-201ENST00000293968 REG3GQ6UW15 175 aa9.45□□□□□ -0.9
CCNF-201ENST00000293968 A0A096LNI7 61 aa9.44□□□□□ -0.9
CCNF-201ENST00000293968 HCG22E2RYF7 251 aa9.44□□□□□ -0.9
CCNF-201ENST00000293968 STAB1Q9NY15 2570 aa9.44□□□□□ -0.9
CCNF-201ENST00000293968 F8WDY8 70 aa9.43□□□□□ -0.9
CCNF-201ENST00000293968 RPL37AP61513 92 aaKnown RBP9.43□□□□□ -0.9
CCNF-201ENST00000293968 LINC00588Q9Y4M8 146 aa9.43□□□□□ -0.9
CCNF-201ENST00000293968 C1orf64Q8NEQ6 169 aa9.42□□□□□ -0.9
CCNF-201ENST00000293968 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.42□□□□□ -0.9
CCNF-201ENST00000293968 DNAH10OSP0CZ25 163 aa9.41□□□□□ -0.9
CCNF-201ENST00000293968 MP68P56378 58 aa9.41□□□□□ -0.9
CCNF-201ENST00000293968 LINC00208Q96KT6 92 aa9.4□□□□□ -0.9
CCNF-201ENST00000293968 C1orf195Q5TG92 126 aa9.4□□□□□ -0.91
CCNF-201ENST00000293968 UBE2AP49459 152 aa9.39□□□□□ -0.91
CCNF-201ENST00000293968 KRTAP4-16G5E9R7 235 aaPredicted RBP9.39□□□□□ -0.91
CCNF-201ENST00000293968 TNP2Q05952 138 aa9.39□□□□□ -0.91
CCNF-201ENST00000293968 hDV103S1A0JD37 113 aa9.38□□□□□ -0.91
CCNF-201ENST00000293968 KRTAP7-1Q8IUC3 87 aa9.38□□□□□ -0.91
CCNF-201ENST00000293968 TLX1NBP0CAT3 122 aa9.38□□□□□ -0.91
CCNF-201ENST00000293968 IGFL1Q6UW32 110 aa9.38□□□□□ -0.91
CCNF-201ENST00000293968 A0A1B0GW54 56 aa9.37□□□□□ -0.91
CCNF-201ENST00000293968 SPRR4Q96PI1 79 aa9.37□□□□□ -0.91
CCNF-201ENST00000293968 COL6A5A8TX70 2615 aa9.37□□□□□ -0.91
CCNF-201ENST00000293968 SPRR1AP35321 89 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms