RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 Q8N1X5 172 aa10.74□□□□□ -0.69
UBR3-201ENST00000272793 LINC00304Q8N9R0 145 aa10.74□□□□□ -0.69
UBR3-201ENST00000272793 FAM168BA1KXE4 195 aa10.73□□□□□ -0.69
UBR3-201ENST00000272793 FAM104AQ969W3 186 aa10.72□□□□□ -0.69
UBR3-201ENST00000272793 LINC00315P59091 139 aa10.72□□□□□ -0.69
UBR3-201ENST00000272793 CDSNQ15517 529 aa10.67□□□□□ -0.7
UBR3-201ENST00000272793 PRO0461Q9UI25 63 aa10.67□□□□□ -0.7
UBR3-201ENST00000272793 CHD8Q9HCK8 2581 aa10.66□□□□□ -0.7
UBR3-201ENST00000272793 IGHV3OR16-9A0A0B4J2B5 98 aa10.66□□□□□ -0.7
UBR3-201ENST00000272793 FASNP49327 2511 aaKnown RBP10.65□□□□□ -0.7
UBR3-201ENST00000272793 IGF2RP11717 2491 aa10.65□□□□□ -0.71
UBR3-201ENST00000272793 A0A1B0GVX0 72 aa10.64□□□□□ -0.71
UBR3-201ENST00000272793 PCNTO95613 3336 aa10.64□□□□□ -0.71
UBR3-201ENST00000272793 MUC22E2RYF6 1773 aaPredicted RBP10.64□□□□□ -0.71
UBR3-201ENST00000272793 UTRNP46939 3433 aa10.63□□□□□ -0.71
UBR3-201ENST00000272793 GOLGB1Q14789 3259 aaKnown RBP10.62□□□□□ -0.71
UBR3-201ENST00000272793 SPINK7P58062 85 aa10.61□□□□□ -0.71
UBR3-201ENST00000272793 PLAC4Q8WY50 150 aa10.59□□□□□ -0.71
UBR3-201ENST00000272793 NBDYA0A0U1RRE5 68 aa10.59□□□□□ -0.71
UBR3-201ENST00000272793 C16orf95Q9H693 158 aa10.58□□□□□ -0.72
UBR3-201ENST00000272793 COX8CQ7Z4L0 72 aa10.57□□□□□ -0.72
UBR3-201ENST00000272793 IGFL1Q6UW32 110 aa10.56□□□□□ -0.72
UBR3-201ENST00000272793 IGLV1-50A0A075B6I6 118 aa10.56□□□□□ -0.72
UBR3-201ENST00000272793 KRTAP10-9P60411 292 aa10.56□□□□□ -0.72
UBR3-201ENST00000272793 SMR3BP02814 79 aaPredicted RBP10.54□□□□□ -0.72
UBR3-201ENST00000272793 H1FX-AS1Q4G0G2 97 aa10.54□□□□□ -0.72
UBR3-201ENST00000272793 A0A1B0GU33 70 aa10.52□□□□□ -0.72
UBR3-201ENST00000272793 KLKP1Q107X0 134 aa10.52□□□□□ -0.73
UBR3-201ENST00000272793 USP9YO00507 2555 aaPredicted RBP10.5□□□□□ -0.73
UBR3-201ENST00000272793 LINC01546A6NGU7 62 aa10.5□□□□□ -0.73
UBR3-201ENST00000272793 REV3LO60673 3130 aa10.49□□□□□ -0.73
UBR3-201ENST00000272793 ANAPC11Q9NYG5 84 aa10.49□□□□□ -0.73
UBR3-201ENST00000272793 GVQW2A0A096LPI5 108 aaPredicted RBP10.49□□□□□ -0.73
UBR3-201ENST00000272793 HRES1P13985 223 aa10.49□□□□□ -0.73
UBR3-201ENST00000272793 H7BZZ5 65 aa10.49□□□□□ -0.73
UBR3-201ENST00000272793 DMAC1Q96GE9 116 aa10.48□□□□□ -0.73
UBR3-201ENST00000272793 CSAG1Q6PB30 78 aa10.48□□□□□ -0.73
UBR3-201ENST00000272793 A0A0G2JQZ4 141 aa10.48□□□□□ -0.73
UBR3-201ENST00000272793 A0A1W2PNN7 141 aa10.48□□□□□ -0.73
UBR3-201ENST00000272793 C9orf163Q8N9P6 203 aa10.48□□□□□ -0.73
UBR3-201ENST00000272793 Q6ZSA8 131 aa10.48□□□□□ -0.73
UBR3-201ENST00000272793 ZNF861PO60384 105 aa10.45□□□□□ -0.74
UBR3-201ENST00000272793 SPANXA2-OT1Q8N9U9 137 aa10.44□□□□□ -0.74
UBR3-201ENST00000272793 AKAP13Q12802 2813 aa10.43□□□□□ -0.74
UBR3-201ENST00000272793 H3BNG1 76 aa10.42□□□□□ -0.74
UBR3-201ENST00000272793 PRR26Q8N8Z3 221 aa10.41□□□□□ -0.74
UBR3-201ENST00000272793 Q8N377 158 aa10.38□□□□□ -0.75
UBR3-201ENST00000272793 STAB1Q9NY15 2570 aa10.37□□□□□ -0.75
UBR3-201ENST00000272793 PRAC1Q96KF2 57 aa10.37□□□□□ -0.75
UBR3-201ENST00000272793 DNAH10OSP0CZ25 163 aa10.36□□□□□ -0.75
UBR3-201ENST00000272793 C15orf56Q8N910 161 aa10.36□□□□□ -0.75
UBR3-201ENST00000272793 A0A1W2PPR1 153 aa10.35□□□□□ -0.75
UBR3-201ENST00000272793 CEP350Q5VT06 3117 aa10.35□□□□□ -0.75
UBR3-201ENST00000272793 S4R3F8 94 aa10.35□□□□□ -0.75
UBR3-201ENST00000272793 WWC2-AS2Q96NR7 200 aa10.34□□□□□ -0.75
UBR3-201ENST00000272793 KCNQ1DNQ9H478 68 aa10.34□□□□□ -0.75
UBR3-201ENST00000272793 KRTAP16-1A8MUX0 517 aa10.33□□□□□ -0.76
UBR3-201ENST00000272793 LITAFQ99732 161 aa10.31□□□□□ -0.76
UBR3-201ENST00000272793 DMBT1Q9UGM3 2413 aaPredicted RBP10.31□□□□□ -0.76
UBR3-201ENST00000272793 R4GN34 69 aa10.29□□□□□ -0.76
UBR3-201ENST00000272793 EIF4EBP3O60516 100 aaPredicted RBP10.27□□□□□ -0.77
UBR3-201ENST00000272793 HECTD1Q9ULT8 2610 aa10.27□□□□□ -0.77
UBR3-201ENST00000272793 ANKRD11Q6UB99 2663 aaPredicted RBP10.26□□□□□ -0.77
UBR3-201ENST00000272793 Q75L30 129 aa10.26□□□□□ -0.77
UBR3-201ENST00000272793 Q8N9P0 234 aaPredicted RBP10.26□□□□□ -0.77
UBR3-201ENST00000272793 CFAP46Q8IYW2 2715 aa10.25□□□□□ -0.77
UBR3-201ENST00000272793 DNAH12Q6ZR08 3092 aa10.25□□□□□ -0.77
UBR3-201ENST00000272793 Q8NAQ8 132 aa10.25□□□□□ -0.77
UBR3-201ENST00000272793 LINC00528Q8N1L1 170 aa10.25□□□□□ -0.77
UBR3-201ENST00000272793 IGLV7-43P04211 117 aa10.24□□□□□ -0.77
UBR3-201ENST00000272793 C5orf42Q9H799 3197 aa10.21□□□□□ -0.77
UBR3-201ENST00000272793 BAHCC1Q9P281 2608 aa10.2□□□□□ -0.78
UBR3-201ENST00000272793 LINC01558Q9Y6Z2 57 aa10.19□□□□□ -0.78
UBR3-201ENST00000272793 IGLV7-46A0A075B6I9 117 aa10.17□□□□□ -0.78
UBR3-201ENST00000272793 ROMO1P60602 79 aa10.17□□□□□ -0.78
UBR3-201ENST00000272793 CFAP54Q96N23 3096 aa10.16□□□□□ -0.78
UBR3-201ENST00000272793 EP400Q96L91 3159 aa10.14□□□□□ -0.79
UBR3-201ENST00000272793 FAM229BQ4G0N7 80 aa10.14□□□□□ -0.79
UBR3-201ENST00000272793 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.14□□□□□ -0.79
UBR3-201ENST00000272793 LAMA2P24043 3122 aaKnown RBP10.14□□□□□ -0.79
UBR3-201ENST00000272793 A0A087WTM6 91 aa10.13□□□□□ -0.79
UBR3-201ENST00000272793 SPRR4Q96PI1 79 aa10.12□□□□□ -0.79
UBR3-201ENST00000272793 C20orf166-AS1Q96NR2 134 aa10.11□□□□□ -0.79
UBR3-201ENST00000272793 XIRP2A4UGR9 3374 aa10.08□□□□□ -0.8
UBR3-201ENST00000272793 C19orf73Q9NVV2 129 aa10.07□□□□□ -0.8
UBR3-201ENST00000272793 CENPEQ02224 2701 aa10.05□□□□□ -0.8
UBR3-201ENST00000272793 MGAM2Q2M2H8 2515 aa10.04□□□□□ -0.8
UBR3-201ENST00000272793 FREM2Q5SZK8 3169 aa10.04□□□□□ -0.8
UBR3-201ENST00000272793 COL4A2P08572 1712 aa10.03□□□□□ -0.8
UBR3-201ENST00000272793 KRTAP24-1Q3LI83 254 aa10.02□□□□□ -0.81
UBR3-201ENST00000272793 OCR1Q9BZK8 76 aa10.01□□□□□ -0.81
UBR3-201ENST00000272793 LINC00612Q8N6U2 182 aa10.01□□□□□ -0.81
UBR3-201ENST00000272793 M0QZ58 72 aa10□□□□□ -0.81
UBR3-201ENST00000272793 RPL37P61927 97 aaKnown RBP10□□□□□ -0.81
UBR3-201ENST00000272793 NOTCH1P46531 2555 aa10□□□□□ -0.81
UBR3-201ENST00000272793 A0A1W2PNM2 257 aa10□□□□□ -0.81
UBR3-201ENST00000272793 NBEAL1Q6ZS30 2694 aa9.99□□□□□ -0.81
UBR3-201ENST00000272793 FP248Q71RG6 208 aaPredicted RBP9.96□□□□□ -0.81
UBR3-201ENST00000272793 KLK9Q2XQG4 91 aa9.94□□□□□ -0.82
UBR3-201ENST00000272793 CEP295Q9C0D2 2601 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms