RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 DNAH11Q96DT5 4516 aa9.84□□□□□ -0.83
COPS3-201ENST00000268717 J3QR89 54 aa9.84□□□□□ -0.83
COPS3-201ENST00000268717 PPDPFLQ8WWR9 84 aa9.84□□□□□ -0.83
COPS3-201ENST00000268717 KCNQ1DNQ9H478 68 aa9.84□□□□□ -0.83
COPS3-201ENST00000268717 DYNC1H1Q14204 4646 aaKnown RBP9.82□□□□□ -0.84
COPS3-201ENST00000268717 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.82□□□□□ -0.84
COPS3-201ENST00000268717 A0A087WTM6 91 aa9.82□□□□□ -0.84
COPS3-201ENST00000268717 LINC00575Q6W349 94 aa9.82□□□□□ -0.84
COPS3-201ENST00000268717 C7orf33Q8WU49 177 aa9.82□□□□□ -0.84
COPS3-201ENST00000268717 A0A096LNI7 61 aa9.81□□□□□ -0.84
COPS3-201ENST00000268717 BAALC-AS2P0C853 105 aa9.81□□□□□ -0.84
COPS3-201ENST00000268717 ELOF1P60002 83 aaKnown RBP9.81□□□□□ -0.84
COPS3-201ENST00000268717 KRTAP7-1Q8IUC3 87 aa9.8□□□□□ -0.84
COPS3-201ENST00000268717 LINC00474Q9P2X8 69 aa9.8□□□□□ -0.84
COPS3-201ENST00000268717 C22orf24Q9Y442 160 aa9.8□□□□□ -0.84
COPS3-201ENST00000268717 FAM168BA1KXE4 195 aa9.79□□□□□ -0.84
COPS3-201ENST00000268717 PRYO14603 147 aa9.79□□□□□ -0.84
COPS3-201ENST00000268717 COX7BP24311 80 aa9.79□□□□□ -0.84
COPS3-201ENST00000268717 TNP2Q05952 138 aa9.79□□□□□ -0.84
COPS3-201ENST00000268717 MRPL55Q7Z7F7 128 aaKnown RBP9.79□□□□□ -0.84
COPS3-201ENST00000268717 IGLV1-50A0A075B6I6 118 aa9.78□□□□□ -0.84
COPS3-201ENST00000268717 ORMDL1Q9P0S3 153 aa9.78□□□□□ -0.84
COPS3-201ENST00000268717 hADV29S1A0JD25 119 aa9.78□□□□□ -0.84
COPS3-201ENST00000268717 H3BQ85 93 aa9.78□□□□□ -0.84
COPS3-201ENST00000268717 SDIM1Q6ZPB5 146 aa9.78□□□□□ -0.84
COPS3-201ENST00000268717 FAM19A5Q7Z5A7 132 aaPredicted RBP9.77□□□□□ -0.85
COPS3-201ENST00000268717 KIAA1109Q2LD37 5005 aa9.76□□□□□ -0.85
COPS3-201ENST00000268717 SPRR1AP35321 89 aa9.76□□□□□ -0.85
COPS3-201ENST00000268717 LINC00528Q8N1L1 170 aa9.75□□□□□ -0.85
COPS3-201ENST00000268717 IGKV2-24A0A0C4DH68 120 aa9.74□□□□□ -0.85
COPS3-201ENST00000268717 TEX49A0A1B0GTD5 131 aa9.74□□□□□ -0.85
COPS3-201ENST00000268717 TMEM256-PLSCR3K7ERE1 68 aa9.74□□□□□ -0.85
COPS3-201ENST00000268717 GHRHP01286 108 aa9.74□□□□□ -0.85
COPS3-201ENST00000268717 INAFM2P0DMQ5 153 aa9.74□□□□□ -0.85
COPS3-201ENST00000268717 DNAH5Q8TE73 4624 aa9.73□□□□□ -0.85
COPS3-201ENST00000268717 KRTAP4-16G5E9R7 235 aaPredicted RBP9.73□□□□□ -0.85
COPS3-201ENST00000268717 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.73□□□□□ -0.85
COPS3-201ENST00000268717 LRP1BQ9NZR2 4599 aa9.73□□□□□ -0.85
COPS3-201ENST00000268717 HERC2O95714 4834 aa9.73□□□□□ -0.85
COPS3-201ENST00000268717 A0A1W2PNN7 141 aa9.72□□□□□ -0.85
COPS3-201ENST00000268717 EPM2AB3EWF7 344 aa9.71□□□□□ -0.86
COPS3-201ENST00000268717 OBSCN-AS1Q96MR7 158 aa9.71□□□□□ -0.86
COPS3-201ENST00000268717 RPL37AP8A6NKH3 93 aa9.7□□□□□ -0.86
COPS3-201ENST00000268717 DHRS4-AS1Q9P1J3 65 aa9.7□□□□□ -0.86
COPS3-201ENST00000268717 B5MCH6 92 aa9.69□□□□□ -0.86
COPS3-201ENST00000268717 Q6ZRX8 168 aa9.69□□□□□ -0.86
COPS3-201ENST00000268717 SPACA4Q8TDM5 124 aa9.69□□□□□ -0.86
COPS3-201ENST00000268717 ETDCA0A1B0GVM5 59 aa9.68□□□□□ -0.86
COPS3-201ENST00000268717 CHTF8P0CG12 524 aa9.68□□□□□ -0.86
COPS3-201ENST00000268717 REG3GQ6UW15 175 aa9.68□□□□□ -0.86
COPS3-201ENST00000268717 Q6ZQY7 126 aa9.68□□□□□ -0.86
COPS3-201ENST00000268717 JMJD7-PLA2G4BH0Y9G9 81 aa9.67□□□□□ -0.86
COPS3-201ENST00000268717 RYR1P21817 5038 aa9.67□□□□□ -0.86
COPS3-201ENST00000268717 FAM240AA0A1B0GVK7 77 aa9.67□□□□□ -0.86
COPS3-201ENST00000268717 FUSP35637 526 aaKnown RBP eCLIP9.66□□□□□ -0.86
COPS3-201ENST00000268717 IGLV5-52A0A0A0MRZ9 124 aa9.65□□□□□ -0.86
COPS3-201ENST00000268717 KRTAP10-2P60368 255 aa9.65□□□□□ -0.86
COPS3-201ENST00000268717 VPS25Q9BRG1 176 aa9.65□□□□□ -0.86
COPS3-201ENST00000268717 HSPG2P98160 4391 aa9.63□□□□□ -0.87
COPS3-201ENST00000268717 PANO1I0J062 215 aa9.63□□□□□ -0.87
COPS3-201ENST00000268717 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.63□□□□□ -0.87
COPS3-201ENST00000268717 APOBP04114 4563 aaKnown RBP9.62□□□□□ -0.87
COPS3-201ENST00000268717 ACYP1P07311 99 aa9.62□□□□□ -0.87
COPS3-201ENST00000268717 PHF5AQ7RTV0 110 aaKnown RBP9.62□□□□□ -0.87
COPS3-201ENST00000268717 Q9BRP9 147 aa9.62□□□□□ -0.87
COPS3-201ENST00000268717 UBE2BP63146 152 aa9.61□□□□□ -0.87
COPS3-201ENST00000268717 H0Y9J4 135 aa9.6□□□□□ -0.87
COPS3-201ENST00000268717 PLAC8Q9NZF1 115 aa9.6□□□□□ -0.87
COPS3-201ENST00000268717 CDIP1Q9H305 208 aa9.59□□□□□ -0.87
COPS3-201ENST00000268717 C21orf62-AS1Q17RA5 79 aa9.58□□□□□ -0.88
COPS3-201ENST00000268717 DPH3Q96FX2 82 aa9.58□□□□□ -0.88
COPS3-201ENST00000268717 C14orf132Q9NPU4 83 aa9.58□□□□□ -0.88
COPS3-201ENST00000268717 CDK2AP2O75956 126 aa9.57□□□□□ -0.88
COPS3-201ENST00000268717 LAMTOR3Q9UHA4 124 aa9.57□□□□□ -0.88
COPS3-201ENST00000268717 IGLV5-48A0A075B6I7 105 aa9.56□□□□□ -0.88
COPS3-201ENST00000268717 PDE6GP18545 87 aa9.56□□□□□ -0.88
COPS3-201ENST00000268717 RBM3P98179 157 aaKnown RBP9.56□□□□□ -0.88
COPS3-201ENST00000268717 FAM19A1Q7Z5A9 133 aa9.56□□□□□ -0.88
COPS3-201ENST00000268717 SMCR5Q8TEV8 140 aa9.56□□□□□ -0.88
COPS3-201ENST00000268717 LOC110117498A0A087WWA1 95 aa9.56□□□□□ -0.88
COPS3-201ENST00000268717 LINC01547P58512 204 aaPredicted RBP9.56□□□□□ -0.88
COPS3-201ENST00000268717 KRTAP11-1Q8IUC1 163 aa9.55□□□□□ -0.88
COPS3-201ENST00000268717 DNAH8Q96JB1 4490 aa9.54□□□□□ -0.88
COPS3-201ENST00000268717 BCE1O60756 84 aa9.54□□□□□ -0.88
COPS3-201ENST00000268717 NDUFV3P56181 108 aaKnown RBP9.54□□□□□ -0.88
COPS3-201ENST00000268717 CCKP06307 115 aa9.53□□□□□ -0.88
COPS3-201ENST00000268717 Q8N377 158 aa9.53□□□□□ -0.88
COPS3-201ENST00000268717 GAGE2AQ6NT46 116 aa9.53□□□□□ -0.88
COPS3-201ENST00000268717 DSCR8Q96T75 97 aa9.52□□□□□ -0.89
COPS3-201ENST00000268717 PCLOQ9Y6V0 5065 aa9.52□□□□□ -0.89
COPS3-201ENST00000268717 TRBV7-4A0A0J9YYF1 115 aa9.51□□□□□ -0.89
COPS3-201ENST00000268717 ERC2-IT1O76042 136 aa9.51□□□□□ -0.89
COPS3-201ENST00000268717 PRLHP81277 87 aa9.51□□□□□ -0.89
COPS3-201ENST00000268717 SIGMAR1Q99720 223 aa9.51□□□□□ -0.89
COPS3-201ENST00000268717 Q6ZQT0 140 aa9.5□□□□□ -0.89
COPS3-201ENST00000268717 KRTAP13-1Q8IUC0 172 aa9.5□□□□□ -0.89
COPS3-201ENST00000268717 KRTAP10-1P60331 282 aa9.49□□□□□ -0.89
COPS3-201ENST00000268717 Q6ZSA8 131 aa9.49□□□□□ -0.89
COPS3-201ENST00000268717 UBE2AP49459 152 aa9.49□□□□□ -0.89
COPS3-201ENST00000268717 A0A1B0GV72 72 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms