RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 ATP5EP2Q5VTU8 51 aa8.47□□□□□ -1.05
LIG1-201ENST00000263274 IGLV6-57P01721 117 aa8.47□□□□□ -1.05
LIG1-201ENST00000263274 MUC7Q8TAX7 377 aa8.45□□□□□ -1.06
LIG1-201ENST00000263274 TRAV10A0A0B4J240 114 aa8.45□□□□□ -1.06
LIG1-201ENST00000263274 FP248Q71RG6 208 aaPredicted RBP8.45□□□□□ -1.06
LIG1-201ENST00000263274 Q8N9L7 120 aa8.45□□□□□ -1.06
LIG1-201ENST00000263274 TRAV7A0A075B6U4 112 aa8.44□□□□□ -1.06
LIG1-201ENST00000263274 PMAIP1Q13794 54 aa8.44□□□□□ -1.06
LIG1-201ENST00000263274 PRR34Q9NV39 138 aa8.44□□□□□ -1.06
LIG1-201ENST00000263274 TRBV7-6A0A0J9YX20 115 aa8.44□□□□□ -1.06
LIG1-201ENST00000263274 C3orf84H3BNL1 204 aa8.44□□□□□ -1.06
LIG1-201ENST00000263274 NKAPP1Q8N9T2 125 aa8.44□□□□□ -1.06
LIG1-201ENST00000263274 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.42□□□□□ -1.06
LIG1-201ENST00000263274 RPL37AP8A6NKH3 93 aa8.41□□□□□ -1.06
LIG1-201ENST00000263274 M0R378 163 aa8.41□□□□□ -1.06
LIG1-201ENST00000263274 ESRGQ1W209 222 aa8.41□□□□□ -1.06
LIG1-201ENST00000263274 TENM3Q9P273 2699 aa8.4□□□□□ -1.06
LIG1-201ENST00000263274 VPREB1P12018 145 aa8.4□□□□□ -1.07
LIG1-201ENST00000263274 LOC110117498A0A087WWA1 95 aa8.39□□□□□ -1.07
LIG1-201ENST00000263274 PDE6GP18545 87 aa8.39□□□□□ -1.07
LIG1-201ENST00000263274 EGFEM1PQ0D2K5 195 aa8.39□□□□□ -1.07
LIG1-201ENST00000263274 NREPQ16612 68 aa8.39□□□□□ -1.07
LIG1-201ENST00000263274 DEFB131BA0A096LNP1 70 aa8.38□□□□□ -1.07
LIG1-201ENST00000263274 SYCNQ0VAF6 134 aa8.38□□□□□ -1.07
LIG1-201ENST00000263274 Q6ZRP5 223 aa8.38□□□□□ -1.07
LIG1-201ENST00000263274 TM2D3Q9BRN9 247 aa8.38□□□□□ -1.07
LIG1-201ENST00000263274 ELOF1P60002 83 aaKnown RBP8.38□□□□□ -1.07
LIG1-201ENST00000263274 PRB2P02812 416 aaPredicted RBP8.38□□□□□ -1.07
LIG1-201ENST00000263274 KLKP1Q107X0 134 aa8.37□□□□□ -1.07
LIG1-201ENST00000263274 C11orf45Q8TAV5 145 aa8.37□□□□□ -1.07
LIG1-201ENST00000263274 GVQW2A0A096LPI5 108 aaPredicted RBP8.36□□□□□ -1.07
LIG1-201ENST00000263274 C15orf56Q8N910 161 aa8.36□□□□□ -1.07
LIG1-201ENST00000263274 LRCOL1A6NCL2 159 aa8.35□□□□□ -1.07
LIG1-201ENST00000263274 KRTAP24-1Q3LI83 254 aa8.34□□□□□ -1.07
LIG1-201ENST00000263274 BPY2O14599 106 aa8.34□□□□□ -1.07
LIG1-201ENST00000263274 FAM229BQ4G0N7 80 aa8.33□□□□□ -1.08
LIG1-201ENST00000263274 TRBV7-4A0A0J9YYF1 115 aa8.33□□□□□ -1.08
LIG1-201ENST00000263274 SERTAD4-AS1Q5TG53 156 aa8.33□□□□□ -1.08
LIG1-201ENST00000263274 H3BQ85 93 aa8.32□□□□□ -1.08
LIG1-201ENST00000263274 ETDCA0A1B0GVM5 59 aa8.32□□□□□ -1.08
LIG1-201ENST00000263274 KRTAP10-11P60412 298 aa8.32□□□□□ -1.08
LIG1-201ENST00000263274 LINC00528Q8N1L1 170 aa8.32□□□□□ -1.08
LIG1-201ENST00000263274 FAM168BA1KXE4 195 aa8.31□□□□□ -1.08
LIG1-201ENST00000263274 EPM2AB3EWF7 344 aa8.31□□□□□ -1.08
LIG1-201ENST00000263274 CD164Q04900 197 aa8.31□□□□□ -1.08
LIG1-201ENST00000263274 C7orf33Q8WU49 177 aa8.31□□□□□ -1.08
LIG1-201ENST00000263274 UBE2BP63146 152 aa8.31□□□□□ -1.08
LIG1-201ENST00000263274 CXCL6P80162 114 aa8.31□□□□□ -1.08
LIG1-201ENST00000263274 TMEM254Q8TBM7 123 aa8.3□□□□□ -1.08
LIG1-201ENST00000263274 NDUFC1O43677 76 aa8.3□□□□□ -1.08
LIG1-201ENST00000263274 H3BS24 57 aa8.29□□□□□ -1.08
LIG1-201ENST00000263274 MDFIQ99750 246 aa8.29□□□□□ -1.08
LIG1-201ENST00000263274 MRPL55Q7Z7F7 128 aaKnown RBP8.28□□□□□ -1.08
LIG1-201ENST00000263274 CASC10Q5T4H9 136 aa8.28□□□□□ -1.08
LIG1-201ENST00000263274 ST20-AS1Q8NBB2 130 aa8.28□□□□□ -1.08
LIG1-201ENST00000263274 FUSP35637 526 aaKnown RBP eCLIP8.27□□□□□ -1.09
LIG1-201ENST00000263274 KRTAP26-1Q6PEX3 210 aa8.27□□□□□ -1.09
LIG1-201ENST00000263274 IGKV2-24A0A0C4DH68 120 aa8.26□□□□□ -1.09
LIG1-201ENST00000263274 ATP5EP56381 51 aaPredicted RBP8.25□□□□□ -1.09
LIG1-201ENST00000263274 Q8N377 158 aa8.25□□□□□ -1.09
LIG1-201ENST00000263274 LINC01556Q5JQF7 62 aa8.25□□□□□ -1.09
LIG1-201ENST00000263274 FAM30AQ9NZY2 134 aa8.25□□□□□ -1.09
LIG1-201ENST00000263274 A0A0G2JQZ4 141 aa8.24□□□□□ -1.09
LIG1-201ENST00000263274 A0A1W2PNN7 141 aa8.24□□□□□ -1.09
LIG1-201ENST00000263274 BCE1O60756 84 aa8.24□□□□□ -1.09
LIG1-201ENST00000263274 C1orf137Q5JT78 98 aa8.23□□□□□ -1.09
LIG1-201ENST00000263274 PRYO14603 147 aa8.23□□□□□ -1.09
LIG1-201ENST00000263274 DEFB116Q30KQ4 102 aa8.22□□□□□ -1.09
LIG1-201ENST00000263274 HIGD2AQ9BW72 106 aa8.22□□□□□ -1.09
LIG1-201ENST00000263274 H3BNG1 76 aa8.22□□□□□ -1.09
LIG1-201ENST00000263274 PSPHP1O15172 72 aa8.21□□□□□ -1.09
LIG1-201ENST00000263274 IGKV4-1P06312 121 aa8.21□□□□□ -1.1
LIG1-201ENST00000263274 KCNQ1DNQ9H478 68 aa8.21□□□□□ -1.1
LIG1-201ENST00000263274 PRR4Q16378 134 aa8.2□□□□□ -1.1
LIG1-201ENST00000263274 LINC00588Q9Y4M8 146 aa8.2□□□□□ -1.1
LIG1-201ENST00000263274 ERC2-IT1O76042 136 aa8.19□□□□□ -1.1
LIG1-201ENST00000263274 SMIM29Q86T20 159 aa8.19□□□□□ -1.1
LIG1-201ENST00000263274 Q6ZRX8 168 aa8.19□□□□□ -1.1
LIG1-201ENST00000263274 DHRS4-AS1Q9P1J3 65 aa8.19□□□□□ -1.1
LIG1-201ENST00000263274 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.19□□□□□ -1.1
LIG1-201ENST00000263274 Q9BRP9 147 aa8.19□□□□□ -1.1
LIG1-201ENST00000263274 PSCAO43653 123 aa8.18□□□□□ -1.1
LIG1-201ENST00000263274 TENM2Q9NT68 2774 aa8.18□□□□□ -1.1
LIG1-201ENST00000263274 RBM12B-AS1Q9P1G2 102 aa8.18□□□□□ -1.1
LIG1-201ENST00000263274 A0A1W2PNM2 257 aa8.17□□□□□ -1.1
LIG1-201ENST00000263274 PRLHP81277 87 aa8.16□□□□□ -1.1
LIG1-201ENST00000263274 A0A096LNI7 61 aa8.16□□□□□ -1.1
LIG1-201ENST00000263274 CSMD3Q7Z407 3707 aa8.16□□□□□ -1.1
LIG1-201ENST00000263274 IGLV1-50A0A075B6I6 118 aa8.15□□□□□ -1.1
LIG1-201ENST00000263274 DNAH10OSP0CZ25 163 aa8.15□□□□□ -1.1
LIG1-201ENST00000263274 STAB2Q8WWQ8 2551 aa8.14□□□□□ -1.11
LIG1-201ENST00000263274 WFDC13Q8IUB5 93 aa8.13□□□□□ -1.11
LIG1-201ENST00000263274 REG3GQ6UW15 175 aa8.12□□□□□ -1.11
LIG1-201ENST00000263274 UBE2DNLQ8IWF7 75 aa8.12□□□□□ -1.11
LIG1-201ENST00000263274 Q8NBF4 154 aa8.11□□□□□ -1.11
LIG1-201ENST00000263274 TGP01266 2768 aa8.11□□□□□ -1.11
LIG1-201ENST00000263274 IGLV5-48A0A075B6I7 105 aa8.11□□□□□ -1.11
LIG1-201ENST00000263274 K7EQZ3 153 aa8.11□□□□□ -1.11
LIG1-201ENST00000263274 OCR1Q9BZK8 76 aa8.11□□□□□ -1.11
LIG1-201ENST00000263274 PRR15Q8IV56 129 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms