RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 RMI2Q96E14 147 aa11.43□□□□□ -0.58
SSB-201ENST00000260956 SERTAD4-AS1Q5TG53 156 aa11.42□□□□□ -0.58
SSB-201ENST00000260956 UBE2DNLQ8IWF7 75 aa11.41□□□□□ -0.58
SSB-201ENST00000260956 DNAH10Q8IVF4 4471 aa11.41□□□□□ -0.58
SSB-201ENST00000260956 EPPK1P58107 5090 aaKnown RBP11.41□□□□□ -0.58
SSB-201ENST00000260956 IGLV5-37A0A075B6J1 123 aa11.4□□□□□ -0.58
SSB-201ENST00000260956 JMJD7-PLA2G4BH0Y9G9 81 aa11.4□□□□□ -0.58
SSB-201ENST00000260956 LINC00528Q8N1L1 170 aa11.4□□□□□ -0.58
SSB-201ENST00000260956 COX7BP24311 80 aa11.4□□□□□ -0.58
SSB-201ENST00000260956 KRTAP7-1Q8IUC3 87 aa11.4□□□□□ -0.58
SSB-201ENST00000260956 M0R2N4 97 aa11.39□□□□□ -0.59
SSB-201ENST00000260956 CCKP06307 115 aa11.39□□□□□ -0.59
SSB-201ENST00000260956 Q6ZQY7 126 aa11.38□□□□□ -0.59
SSB-201ENST00000260956 C7orf33Q8WU49 177 aa11.38□□□□□ -0.59
SSB-201ENST00000260956 KCNQ1DNQ9H478 68 aa11.38□□□□□ -0.59
SSB-201ENST00000260956 LINC00846Q9NV44 126 aa11.38□□□□□ -0.59
SSB-201ENST00000260956 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.37□□□□□ -0.59
SSB-201ENST00000260956 IMUPQ9GZP8 106 aa11.37□□□□□ -0.59
SSB-201ENST00000260956 FAT2Q9NYQ8 4349 aa11.37□□□□□ -0.59
SSB-201ENST00000260956 Q6ZR54 194 aa11.36□□□□□ -0.59
SSB-201ENST00000260956 NDUFV3P56181 108 aaKnown RBP11.35□□□□□ -0.59
SSB-201ENST00000260956 LOC110117498A0A087WWA1 95 aa11.35□□□□□ -0.59
SSB-201ENST00000260956 A0A1B0GV72 72 aa11.34□□□□□ -0.59
SSB-201ENST00000260956 H3BQ85 93 aa11.34□□□□□ -0.59
SSB-201ENST00000260956 KRTAP4-16G5E9R7 235 aaPredicted RBP11.33□□□□□ -0.6
SSB-201ENST00000260956 Q6ZQT0 140 aa11.32□□□□□ -0.6
SSB-201ENST00000260956 FAM168BA1KXE4 195 aa11.32□□□□□ -0.6
SSB-201ENST00000260956 Q6JHZ5 121 aa11.32□□□□□ -0.6
SSB-201ENST00000260956 NBDYA0A0U1RRE5 68 aa11.31□□□□□ -0.6
SSB-201ENST00000260956 SPRR1AP35321 89 aa11.31□□□□□ -0.6
SSB-201ENST00000260956 DNAH17Q9UFH2 4485 aa11.3□□□□□ -0.6
SSB-201ENST00000260956 NKAPP1Q8N9T2 125 aa11.3□□□□□ -0.6
SSB-201ENST00000260956 CNBPP62633 177 aaKnown RBP11.29□□□□□ -0.6
SSB-201ENST00000260956 IGLV1-50A0A075B6I6 118 aa11.28□□□□□ -0.6
SSB-201ENST00000260956 LOC107984640A0A0U1RRK4 108 aa11.28□□□□□ -0.6
SSB-201ENST00000260956 RTL8CO15255 209 aa11.28□□□□□ -0.6
SSB-201ENST00000260956 RBM3P98179 157 aaKnown RBP11.28□□□□□ -0.6
SSB-201ENST00000260956 ANAPC13Q9BS18 74 aa11.28□□□□□ -0.6
SSB-201ENST00000260956 HECTD4Q9Y4D8 3996 aa11.27□□□□□ -0.6
SSB-201ENST00000260956 TRBV7-4A0A0J9YYF1 115 aa11.26□□□□□ -0.61
SSB-201ENST00000260956 PRYO14603 147 aa11.26□□□□□ -0.61
SSB-201ENST00000260956 PKD1P98161 4303 aa11.25□□□□□ -0.61
SSB-201ENST00000260956 HIST1H4AP62805 103 aaKnown RBP11.25□□□□□ -0.61
SSB-201ENST00000260956 PKHD1P08F94 4074 aa11.25□□□□□ -0.61
SSB-201ENST00000260956 LAMTOR3Q9UHA4 124 aa11.24□□□□□ -0.61
SSB-201ENST00000260956 B5MCH6 92 aa11.23□□□□□ -0.61
SSB-201ENST00000260956 LINC01547P58512 204 aaPredicted RBP11.23□□□□□ -0.61
SSB-201ENST00000260956 Q6ZRX8 168 aa11.23□□□□□ -0.61
SSB-201ENST00000260956 Q9BRP9 147 aa11.22□□□□□ -0.61
SSB-201ENST00000260956 FAM236AA0A1B0GUQ0 79 aa11.21□□□□□ -0.61
SSB-201ENST00000260956 FAM236BA0A1B0GV22 79 aa11.21□□□□□ -0.61
SSB-201ENST00000260956 PDE6GP18545 87 aa11.21□□□□□ -0.61
SSB-201ENST00000260956 C1orf134Q5TEV5 83 aa11.21□□□□□ -0.61
SSB-201ENST00000260956 DNAH11Q96DT5 4516 aa11.21□□□□□ -0.61
SSB-201ENST00000260956 A0A096LNI7 61 aa11.21□□□□□ -0.62
SSB-201ENST00000260956 GHRHP01286 108 aa11.21□□□□□ -0.62
SSB-201ENST00000260956 Q6ZRN7 208 aaPredicted RBP11.21□□□□□ -0.62
SSB-201ENST00000260956 MRPL55Q7Z7F7 128 aaKnown RBP11.21□□□□□ -0.62
SSB-201ENST00000260956 RPL37AP8A6NKH3 93 aa11.2□□□□□ -0.62
SSB-201ENST00000260956 FAM19A5Q7Z5A7 132 aaPredicted RBP11.2□□□□□ -0.62
SSB-201ENST00000260956 IGKV3D-7A0A0C4DH55 119 aa11.19□□□□□ -0.62
SSB-201ENST00000260956 LRCOL1A6NCL2 159 aa11.19□□□□□ -0.62
SSB-201ENST00000260956 C16orf90A8MZG2 172 aa11.19□□□□□ -0.62
SSB-201ENST00000260956 ATP5EP2Q5VTU8 51 aa11.18□□□□□ -0.62
SSB-201ENST00000260956 Q8N377 158 aa11.18□□□□□ -0.62
SSB-201ENST00000260956 DSCR8Q96T75 97 aa11.18□□□□□ -0.62
SSB-201ENST00000260956 DHRS4-AS1Q9P1J3 65 aa11.17□□□□□ -0.62
SSB-201ENST00000260956 TNP2Q05952 138 aa11.16□□□□□ -0.62
SSB-201ENST00000260956 IGLV5-48A0A075B6I7 105 aa11.15□□□□□ -0.62
SSB-201ENST00000260956 A0A1W2PNN7 141 aa11.15□□□□□ -0.63
SSB-201ENST00000260956 C14orf177Q52M58 125 aa11.15□□□□□ -0.63
SSB-201ENST00000260956 CCDC179H3BU77 68 aa11.14□□□□□ -0.63
SSB-201ENST00000260956 A0A1B0GVY2 172 aa11.13□□□□□ -0.63
SSB-201ENST00000260956 PSCAO43653 123 aa11.13□□□□□ -0.63
SSB-201ENST00000260956 BIRC6Q9NR09 4857 aa11.13□□□□□ -0.63
SSB-201ENST00000260956 LINC00336Q6ZUF6 198 aa11.12□□□□□ -0.63
SSB-201ENST00000260956 UBL5Q9BZL1 73 aa11.12□□□□□ -0.63
SSB-201ENST00000260956 ETDCA0A1B0GVM5 59 aa11.12□□□□□ -0.63
SSB-201ENST00000260956 Q6ZVQ6 151 aa11.12□□□□□ -0.63
SSB-201ENST00000260956 ERC2-IT1O76042 136 aa11.11□□□□□ -0.63
SSB-201ENST00000260956 A0A087WVE0 104 aa11.1□□□□□ -0.63
SSB-201ENST00000260956 REG3GQ6UW15 175 aa11.1□□□□□ -0.63
SSB-201ENST00000260956 C9orf163Q8N9P6 203 aa11.09□□□□□ -0.63
SSB-201ENST00000260956 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.09□□□□□ -0.63
SSB-201ENST00000260956 ST20-AS1Q8NBB2 130 aa11.09□□□□□ -0.63
SSB-201ENST00000260956 IGKV2-24A0A0C4DH68 120 aa11.07□□□□□ -0.64
SSB-201ENST00000260956 CHTF8P0CG12 524 aa11.06□□□□□ -0.64
SSB-201ENST00000260956 KRTAP11-1Q8IUC1 163 aa11.06□□□□□ -0.64
SSB-201ENST00000260956 FAM19A1Q7Z5A9 133 aa11.06□□□□□ -0.64
SSB-201ENST00000260956 DYNC1H1Q14204 4646 aaKnown RBP11.05□□□□□ -0.64
SSB-201ENST00000260956 DNAH5Q8TE73 4624 aa11.05□□□□□ -0.64
SSB-201ENST00000260956 ATOX1O00244 68 aa11.04□□□□□ -0.64
SSB-201ENST00000260956 FUSP35637 526 aaKnown RBP eCLIP11.04□□□□□ -0.64
SSB-201ENST00000260956 C3orf22Q8N5N4 141 aa11.04□□□□□ -0.64
SSB-201ENST00000260956 DEFB105AQ8NG35 78 aa11.04□□□□□ -0.64
SSB-201ENST00000260956 KIAA1109Q2LD37 5005 aa11.03□□□□□ -0.64
SSB-201ENST00000260956 EPM2AB3EWF7 344 aa11.03□□□□□ -0.64
SSB-201ENST00000260956 SMIM29Q86T20 159 aa11.03□□□□□ -0.64
SSB-201ENST00000260956 KRTAP10-2P60368 255 aa11.02□□□□□ -0.65
SSB-201ENST00000260956 CXCL6P80162 114 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms