RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 NUP210LQ5VU65 1888 aa2.66□□□□□ -1.98
RNF38-201ENST00000259605 BAHCC1Q9P281 2608 aa2.65□□□□□ -1.98
RNF38-201ENST00000259605 H3BS24 57 aa2.65□□□□□ -1.98
RNF38-201ENST00000259605 DSCR10P59022 87 aa2.65□□□□□ -1.99
RNF38-201ENST00000259605 CRIP3Q6Q6R5 217 aa2.65□□□□□ -1.99
RNF38-201ENST00000259605 LRP4O75096 1905 aa2.65□□□□□ -1.99
RNF38-201ENST00000259605 IGLV8-61A0A075B6I0 122 aa2.65□□□□□ -1.99
RNF38-201ENST00000259605 EIF4EBP3O60516 100 aaPredicted RBP2.65□□□□□ -1.99
RNF38-201ENST00000259605 ERC2-IT1O76042 136 aa2.65□□□□□ -1.99
RNF38-201ENST00000259605 SMCPP49901 116 aaPredicted RBP2.65□□□□□ -1.99
RNF38-201ENST00000259605 A0A1B0GVX0 72 aa2.64□□□□□ -1.99
RNF38-201ENST00000259605 PRR26Q8N8Z3 221 aa2.64□□□□□ -1.99
RNF38-201ENST00000259605 SPRR4Q96PI1 79 aa2.64□□□□□ -1.99
RNF38-201ENST00000259605 AGRNO00468 2067 aa2.64□□□□□ -1.99
RNF38-201ENST00000259605 IGLV5-48A0A075B6I7 105 aa2.64□□□□□ -1.99
RNF38-201ENST00000259605 A0A096LNT2 108 aa2.64□□□□□ -1.99
RNF38-201ENST00000259605 ARHGAP32A7KAX9 2087 aa2.64□□□□□ -1.99
RNF38-201ENST00000259605 IGFL1Q6UW32 110 aa2.64□□□□□ -1.99
RNF38-201ENST00000259605 KCNQ1DNQ9H478 68 aa2.64□□□□□ -1.99
RNF38-201ENST00000259605 KIAA1549LQ6ZVL6 1849 aa2.64□□□□□ -1.99
RNF38-201ENST00000259605 COL4A2P08572 1712 aa2.63□□□□□ -1.99
RNF38-201ENST00000259605 A8MUN3 132 aa2.63□□□□□ -1.99
RNF38-201ENST00000259605 PRR15Q8IV56 129 aa2.63□□□□□ -1.99
RNF38-201ENST00000259605 LINC01600Q96MT4 127 aa2.63□□□□□ -1.99
RNF38-201ENST00000259605 C8orf17Q9NRJ1 99 aa2.63□□□□□ -1.99
RNF38-201ENST00000259605 PRR34Q9NV39 138 aa2.63□□□□□ -1.99
RNF38-201ENST00000259605 SPINT4Q6UDR6 99 aa2.63□□□□□ -1.99
RNF38-201ENST00000259605 LITAFQ99732 161 aa2.63□□□□□ -1.99
RNF38-201ENST00000259605 KRTAP3-3Q9BYR6 98 aa2.63□□□□□ -1.99
RNF38-201ENST00000259605 KRTAP3-2Q9BYR7 98 aa2.63□□□□□ -1.99
RNF38-201ENST00000259605 SETXQ7Z333 2677 aaKnown RBP2.63□□□□□ -1.99
RNF38-201ENST00000259605 Q6ZQT0 140 aa2.63□□□□□ -1.99
RNF38-201ENST00000259605 LCE2DQ5TA82 110 aaPredicted RBP2.62□□□□□ -1.99
RNF38-201ENST00000259605 LUZP6Q538Z0 58 aa2.62□□□□□ -1.99
RNF38-201ENST00000259605 ATRQ13535 2644 aa2.62□□□□□ -1.99
RNF38-201ENST00000259605 C9orf129Q5T035 196 aaKnown RBP2.62□□□□□ -1.99
RNF38-201ENST00000259605 K7EQZ3 153 aa2.62□□□□□ -1.99
RNF38-201ENST00000259605 KRTAP1-1Q07627 177 aa2.62□□□□□ -1.99
RNF38-201ENST00000259605 UQCR11O14957 56 aa2.61□□□□□ -1.99
RNF38-201ENST00000259605 USP24Q9UPU5 2620 aa2.61□□□□□ -1.99
RNF38-201ENST00000259605 KRTAP10-3P60369 221 aa2.61□□□□□ -1.99
RNF38-201ENST00000259605 IGLV5-45A0A087WSX0 123 aa2.61□□□□□ -1.99
RNF38-201ENST00000259605 A8MTW9 85 aa2.61□□□□□ -1.99
RNF38-201ENST00000259605 C15orf56Q8N910 161 aa2.61□□□□□ -1.99
RNF38-201ENST00000259605 HELZ2Q9BYK8 2649 aaKnown RBP2.61□□□□□ -1.99
RNF38-201ENST00000259605 KLK9Q2XQG4 91 aa2.61□□□□□ -1.99
RNF38-201ENST00000259605 SMIM29Q86T20 159 aa2.61□□□□□ -1.99
RNF38-201ENST00000259605 KRTAP1-3Q8IUG1 177 aa2.61□□□□□ -1.99
RNF38-201ENST00000259605 EP400Q96L91 3159 aa2.61□□□□□ -1.99
RNF38-201ENST00000259605 URB1-AS1Q96HZ7 61 aa2.6□□□□□ -1.99
RNF38-201ENST00000259605 PLAC8Q9NZF1 115 aa2.6□□□□□ -1.99
RNF38-201ENST00000259605 EML5Q05BV3 1969 aa2.6□□□□□ -1.99
RNF38-201ENST00000259605 FLG2Q5D862 2391 aaPredicted RBP2.6□□□□□ -1.99
RNF38-201ENST00000259605 KTN1-AS1Q86SY8 53 aa2.6□□□□□ -1.99
RNF38-201ENST00000259605 HCFC1P51610 2035 aa2.6□□□□□ -1.99
RNF38-201ENST00000259605 R4GN34 69 aa2.59□□□□□ -1.99
RNF38-201ENST00000259605 LOC110117498A0A087WWA1 95 aa2.59□□□□□ -2
RNF38-201ENST00000259605 FAM168BA1KXE4 195 aa2.59□□□□□ -2
RNF38-201ENST00000259605 CPAMD8Q8IZJ3 1885 aa2.59□□□□□ -2
RNF38-201ENST00000259605 KIAA1549Q9HCM3 1950 aa2.59□□□□□ -2
RNF38-201ENST00000259605 CDC42SE1Q9NRR8 79 aa2.59□□□□□ -2
RNF38-201ENST00000259605 TANC2Q9HCD6 1990 aa2.58□□□□□ -2
RNF38-201ENST00000259605 S4R3F8 94 aa2.58□□□□□ -2
RNF38-201ENST00000259605 ADAMTSL4-AS1Q5T5F5 129 aa2.58□□□□□ -2
RNF38-201ENST00000259605 H7BZZ5 65 aa2.58□□□□□ -2
RNF38-201ENST00000259605 Q8N1X5 172 aa2.57□□□□□ -2
RNF38-201ENST00000259605 FAM104AQ969W3 186 aa2.57□□□□□ -2
RNF38-201ENST00000259605 A0A1W2PNN7 141 aa2.56□□□□□ -2
RNF38-201ENST00000259605 GAS8-AS1O95177 125 aa2.56□□□□□ -2
RNF38-201ENST00000259605 LCA10Q71F78 164 aa2.56□□□□□ -2
RNF38-201ENST00000259605 TSPEAR-AS2P59090 65 aa2.55□□□□□ -2
RNF38-201ENST00000259605 ANAPC11Q9NYG5 84 aa2.55□□□□□ -2
RNF38-201ENST00000259605 ZCCHC13Q8WW36 166 aaKnown RBP2.55□□□□□ -2
RNF38-201ENST00000259605 A0A0D9SG42 100 aa2.54□□□□□ -2
RNF38-201ENST00000259605 PSPHP1O15172 72 aa2.54□□□□□ -2
RNF38-201ENST00000259605 DMBT1Q9UGM3 2413 aaPredicted RBP2.54□□□□□ -2
RNF38-201ENST00000259605 LINC01546A6NGU7 62 aa2.54□□□□□ -2
RNF38-201ENST00000259605 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.53□□□□□ -2
RNF38-201ENST00000259605 NOTCH1P46531 2555 aa2.53□□□□□ -2
RNF38-201ENST00000259605 PTPRBP23467 1997 aa2.53□□□□□ -2
RNF38-201ENST00000259605 A0A096LNJ9 63 aa2.53□□□□□ -2
RNF38-201ENST00000259605 MIR22HGQ0VDD5 57 aa2.53□□□□□ -2
RNF38-201ENST00000259605 KLKP1Q107X0 134 aa2.53□□□□□ -2
RNF38-201ENST00000259605 FAM218AQ96MZ4 157 aa2.53□□□□□ -2
RNF38-201ENST00000259605 A0A087WVE0 104 aa2.52□□□□□ -2.01
RNF38-201ENST00000259605 KRTAP10-1P60331 282 aa2.51□□□□□ -2.01
RNF38-201ENST00000259605 CYP4F30PQ9H0H9 118 aa2.51□□□□□ -2.01
RNF38-201ENST00000259605 GIG44P09565 113 aaPredicted RBP2.51□□□□□ -2.01
RNF38-201ENST00000259605 COA5Q86WW8 74 aa2.5□□□□□ -2.01
RNF38-201ENST00000259605 SPINK7P58062 85 aa2.5□□□□□ -2.01
RNF38-201ENST00000259605 Q1T7F1 81 aa2.5□□□□□ -2.01
RNF38-201ENST00000259605 Q8N377 158 aa2.5□□□□□ -2.01
RNF38-201ENST00000259605 DMAC1Q96GE9 116 aa2.5□□□□□ -2.01
RNF38-201ENST00000259605 CYSTM1Q9H1C7 97 aa2.5□□□□□ -2.01
RNF38-201ENST00000259605 COL27A1Q8IZC6 1860 aaPredicted RBP2.49□□□□□ -2.01
RNF38-201ENST00000259605 M0QZ58 72 aa2.48□□□□□ -2.01
RNF38-201ENST00000259605 RPS29P62273 56 aaKnown RBP2.48□□□□□ -2.01
RNF38-201ENST00000259605 Q6ZR54 194 aa2.48□□□□□ -2.01
RNF38-201ENST00000259605 A0A1B0GU33 70 aa2.48□□□□□ -2.01
RNF38-201ENST00000259605 A0A0A0MQY5 61 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms