RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 SACSQ9NZJ4 4579 aa17.76■□□□□ 0.43
CCM2-201ENST00000258781 KRTAP7-1Q8IUC3 87 aa17.74■□□□□ 0.43
CCM2-201ENST00000258781 C16orf90A8MZG2 172 aa17.73■□□□□ 0.43
CCM2-201ENST00000258781 H3BQ85 93 aa17.73■□□□□ 0.43
CCM2-201ENST00000258781 LINC00528Q8N1L1 170 aa17.72■□□□□ 0.43
CCM2-201ENST00000258781 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.71■□□□□ 0.43
CCM2-201ENST00000258781 IGLV1-50A0A075B6I6 118 aa17.7■□□□□ 0.42
CCM2-201ENST00000258781 A0A096LNI7 61 aa17.7■□□□□ 0.42
CCM2-201ENST00000258781 PRYO14603 147 aa17.7■□□□□ 0.42
CCM2-201ENST00000258781 ACYP1P07311 99 aa17.7■□□□□ 0.42
CCM2-201ENST00000258781 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP17.7■□□□□ 0.42
CCM2-201ENST00000258781 FAM19A5Q7Z5A7 132 aaPredicted RBP17.7■□□□□ 0.42
CCM2-201ENST00000258781 PKIGQ9Y2B9 76 aa17.69■□□□□ 0.42
CCM2-201ENST00000258781 Q6ZQY7 126 aa17.69■□□□□ 0.42
CCM2-201ENST00000258781 MRPL55Q7Z7F7 128 aaKnown RBP17.69■□□□□ 0.42
CCM2-201ENST00000258781 FRAS1Q86XX4 4008 aa17.68■□□□□ 0.42
CCM2-201ENST00000258781 JMJD7-PLA2G4BH0Y9G9 81 aa17.68■□□□□ 0.42
CCM2-201ENST00000258781 DNAH17Q9UFH2 4485 aa17.66■□□□□ 0.42
CCM2-201ENST00000258781 GHRHP01286 108 aa17.65■□□□□ 0.42
CCM2-201ENST00000258781 XGP55808 180 aa17.65■□□□□ 0.42
CCM2-201ENST00000258781 C9orf163Q8N9P6 203 aa17.65■□□□□ 0.42
CCM2-201ENST00000258781 C14orf132Q9NPU4 83 aa17.65■□□□□ 0.42
CCM2-201ENST00000258781 RPL37AP8A6NKH3 93 aa17.64■□□□□ 0.41
CCM2-201ENST00000258781 SPRR1AP35321 89 aa17.63■□□□□ 0.41
CCM2-201ENST00000258781 IGKV2-24A0A0C4DH68 120 aa17.62■□□□□ 0.41
CCM2-201ENST00000258781 KRTAP4-16G5E9R7 235 aaPredicted RBP17.61■□□□□ 0.41
CCM2-201ENST00000258781 GAGE2AQ6NT46 116 aa17.6■□□□□ 0.41
CCM2-201ENST00000258781 MT-ATP8P03928 68 aa17.59■□□□□ 0.41
CCM2-201ENST00000258781 C1orf134Q5TEV5 83 aa17.59■□□□□ 0.41
CCM2-201ENST00000258781 B5MCH6 92 aa17.56■□□□□ 0.4
CCM2-201ENST00000258781 Q6ZRX8 168 aa17.56■□□□□ 0.4
CCM2-201ENST00000258781 HECTD4Q9Y4D8 3996 aa17.56■□□□□ 0.4
CCM2-201ENST00000258781 ETDCA0A1B0GVM5 59 aa17.56■□□□□ 0.4
CCM2-201ENST00000258781 A0A1W2PNN7 141 aa17.56■□□□□ 0.4
CCM2-201ENST00000258781 DHRS4-AS1Q9P1J3 65 aa17.55■□□□□ 0.4
CCM2-201ENST00000258781 KMT2CQ8NEZ4 4911 aaKnown RBP17.55■□□□□ 0.4
CCM2-201ENST00000258781 A0A087WTM6 91 aa17.54■□□□□ 0.4
CCM2-201ENST00000258781 A0A1B0GV72 72 aa17.54■□□□□ 0.4
CCM2-201ENST00000258781 LAMTOR3Q9UHA4 124 aa17.54■□□□□ 0.4
CCM2-201ENST00000258781 SDIM1Q6ZPB5 146 aa17.53■□□□□ 0.4
CCM2-201ENST00000258781 SCGB1A1P11684 91 aa17.52■□□□□ 0.4
CCM2-201ENST00000258781 LINC00474Q9P2X8 69 aa17.52■□□□□ 0.4
CCM2-201ENST00000258781 FAT2Q9NYQ8 4349 aa17.52■□□□□ 0.39
CCM2-201ENST00000258781 CCKP06307 115 aa17.51■□□□□ 0.39
CCM2-201ENST00000258781 REG3GQ6UW15 175 aa17.51■□□□□ 0.39
CCM2-201ENST00000258781 CHTF8P0CG12 524 aa17.5■□□□□ 0.39
CCM2-201ENST00000258781 RBM3P98179 157 aaKnown RBP17.5■□□□□ 0.39
CCM2-201ENST00000258781 PCP4P48539 62 aa17.5■□□□□ 0.39
CCM2-201ENST00000258781 LCE6AA0A183 80 aa17.49■□□□□ 0.39
CCM2-201ENST00000258781 LOC110117498A0A087WWA1 95 aa17.47■□□□□ 0.39
CCM2-201ENST00000258781 Q9BRP9 147 aa17.47■□□□□ 0.39
CCM2-201ENST00000258781 RTL8CO15255 209 aa17.46■□□□□ 0.39
CCM2-201ENST00000258781 DNAH11Q96DT5 4516 aa17.46■□□□□ 0.38
CCM2-201ENST00000258781 RYR2Q92736 4967 aa17.45■□□□□ 0.38
CCM2-201ENST00000258781 SMCR5Q8TEV8 140 aa17.44■□□□□ 0.38
CCM2-201ENST00000258781 NDUFV3P56181 108 aaKnown RBP17.43■□□□□ 0.38
CCM2-201ENST00000258781 TNP2Q05952 138 aa17.43■□□□□ 0.38
CCM2-201ENST00000258781 LINC00643Q86TS7 51 aa17.43■□□□□ 0.38
CCM2-201ENST00000258781 Q6ZQT0 140 aa17.42■□□□□ 0.38
CCM2-201ENST00000258781 PDE6GP18545 87 aa17.41■□□□□ 0.38
CCM2-201ENST00000258781 DSCR8Q96T75 97 aa17.41■□□□□ 0.38
CCM2-201ENST00000258781 FUSP35637 526 aaKnown RBP eCLIP17.39■□□□□ 0.38
CCM2-201ENST00000258781 PHF5AQ7RTV0 110 aaKnown RBP17.39■□□□□ 0.37
CCM2-201ENST00000258781 UBE2BP63146 152 aa17.37■□□□□ 0.37
CCM2-201ENST00000258781 LINC00846Q9NV44 126 aa17.37■□□□□ 0.37
CCM2-201ENST00000258781 LINC01547P58512 204 aaPredicted RBP17.37■□□□□ 0.37
CCM2-201ENST00000258781 Q6Q795 121 aa17.36■□□□□ 0.37
CCM2-201ENST00000258781 Q8N377 158 aa17.36■□□□□ 0.37
CCM2-201ENST00000258781 SPACA4Q8TDM5 124 aa17.36■□□□□ 0.37
CCM2-201ENST00000258781 DNAH5Q8TE73 4624 aa17.36■□□□□ 0.37
CCM2-201ENST00000258781 TRBV7-4A0A0J9YYF1 115 aa17.35■□□□□ 0.37
CCM2-201ENST00000258781 PANO1I0J062 215 aa17.35■□□□□ 0.37
CCM2-201ENST00000258781 PKD1P98161 4303 aa17.34■□□□□ 0.37
CCM2-201ENST00000258781 IGLV5-48A0A075B6I7 105 aa17.34■□□□□ 0.37
CCM2-201ENST00000258781 EPM2AB3EWF7 344 aa17.33■□□□□ 0.37
CCM2-201ENST00000258781 C21orf62-AS1Q17RA5 79 aa17.33■□□□□ 0.37
CCM2-201ENST00000258781 TRBV7-7A0A0K0K1E9 115 aa17.33■□□□□ 0.36
CCM2-201ENST00000258781 FAM19A1Q7Z5A9 133 aa17.33■□□□□ 0.36
CCM2-201ENST00000258781 DEFB105AQ8NG35 78 aa17.33■□□□□ 0.36
CCM2-201ENST00000258781 ERC2-IT1O76042 136 aa17.31■□□□□ 0.36
CCM2-201ENST00000258781 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.31■□□□□ 0.36
CCM2-201ENST00000258781 KRTAP11-1Q8IUC1 163 aa17.29■□□□□ 0.36
CCM2-201ENST00000258781 ST20-AS1Q8NBB2 130 aa17.29■□□□□ 0.36
CCM2-201ENST00000258781 DPH3Q96FX2 82 aa17.29■□□□□ 0.36
CCM2-201ENST00000258781 IMUPQ9GZP8 106 aa17.27■□□□□ 0.36
CCM2-201ENST00000258781 H0Y9J4 135 aa17.27■□□□□ 0.35
CCM2-201ENST00000258781 PRLHP81277 87 aa17.26■□□□□ 0.35
CCM2-201ENST00000258781 IGLV5-52A0A0A0MRZ9 124 aa17.25■□□□□ 0.35
CCM2-201ENST00000258781 Q6JHZ5 121 aa17.25■□□□□ 0.35
CCM2-201ENST00000258781 KRTAP10-2P60368 255 aa17.23■□□□□ 0.35
CCM2-201ENST00000258781 UBL5Q9BZL1 73 aa17.2■□□□□ 0.34
CCM2-201ENST00000258781 RYR3Q15413 4870 aa17.19■□□□□ 0.34
CCM2-201ENST00000258781 HIGD2AQ9BW72 106 aa17.18■□□□□ 0.34
CCM2-201ENST00000258781 BCE1O60756 84 aa17.17■□□□□ 0.34
CCM2-201ENST00000258781 C3orf22Q8N5N4 141 aa17.17■□□□□ 0.34
CCM2-201ENST00000258781 PKHD1P08F94 4074 aa17.17■□□□□ 0.34
CCM2-201ENST00000258781 PLAC8Q9NZF1 115 aa17.16■□□□□ 0.34
CCM2-201ENST00000258781 ATP5EP2Q5VTU8 51 aa17.15■□□□□ 0.34
CCM2-201ENST00000258781 UBE2AP49459 152 aa17.14■□□□□ 0.33
CCM2-201ENST00000258781 DNAH8Q96JB1 4490 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms