RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 KRTAP7-1Q8IUC3 87 aa16.24■□□□□ 0.19
TMEM55B-201ENST00000250489 IGKV3D-7A0A0C4DH55 119 aa16.23■□□□□ 0.19
TMEM55B-201ENST00000250489 DSCR8Q96T75 97 aa16.22■□□□□ 0.19
TMEM55B-201ENST00000250489 IGLV1-50A0A075B6I6 118 aa16.2■□□□□ 0.18
TMEM55B-201ENST00000250489 RPL37AP8A6NKH3 93 aa16.19■□□□□ 0.18
TMEM55B-201ENST00000250489 PRYO14603 147 aa16.19■□□□□ 0.18
TMEM55B-201ENST00000250489 PDE6GP18545 87 aa16.19■□□□□ 0.18
TMEM55B-201ENST00000250489 M0R2N4 97 aa16.17■□□□□ 0.18
TMEM55B-201ENST00000250489 FAM19A5Q7Z5A7 132 aaPredicted RBP16.17■□□□□ 0.18
TMEM55B-201ENST00000250489 TRBV7-4A0A0J9YYF1 115 aa16.16■□□□□ 0.18
TMEM55B-201ENST00000250489 KRTAP4-16G5E9R7 235 aaPredicted RBP16.16■□□□□ 0.18
TMEM55B-201ENST00000250489 PSCAO43653 123 aa16.16■□□□□ 0.18
TMEM55B-201ENST00000250489 SPRR1AP35321 89 aa16.16■□□□□ 0.18
TMEM55B-201ENST00000250489 CNBPP62633 177 aaKnown RBP16.15■□□□□ 0.18
TMEM55B-201ENST00000250489 MRPL55Q7Z7F7 128 aaKnown RBP16.15■□□□□ 0.18
TMEM55B-201ENST00000250489 UBL5Q9BZL1 73 aa16.15■□□□□ 0.18
TMEM55B-201ENST00000250489 LYSTQ99698 3801 aa16.14■□□□□ 0.17
TMEM55B-201ENST00000250489 Q6ZRX8 168 aa16.13■□□□□ 0.17
TMEM55B-201ENST00000250489 B5MCH6 92 aa16.13■□□□□ 0.17
TMEM55B-201ENST00000250489 CCDC179H3BU77 68 aa16.13■□□□□ 0.17
TMEM55B-201ENST00000250489 ATP5EP2Q5VTU8 51 aa16.13■□□□□ 0.17
TMEM55B-201ENST00000250489 HIST1H4AP62805 103 aaKnown RBP16.12■□□□□ 0.17
TMEM55B-201ENST00000250489 DNAH10Q8IVF4 4471 aa16.11■□□□□ 0.17
TMEM55B-201ENST00000250489 NUPR2A6NF83 97 aa16.11■□□□□ 0.17
TMEM55B-201ENST00000250489 DHRS4-AS1Q9P1J3 65 aa16.11■□□□□ 0.17
TMEM55B-201ENST00000250489 ETDCA0A1B0GVM5 59 aa16.09■□□□□ 0.17
TMEM55B-201ENST00000250489 Q9BRP9 147 aa16.09■□□□□ 0.17
TMEM55B-201ENST00000250489 A0A096LNI7 61 aa16.08■□□□□ 0.16
TMEM55B-201ENST00000250489 C16orf90A8MZG2 172 aa16.07■□□□□ 0.16
TMEM55B-201ENST00000250489 A0A087WVE0 104 aa16.06■□□□□ 0.16
TMEM55B-201ENST00000250489 C14orf177Q52M58 125 aa16.06■□□□□ 0.16
TMEM55B-201ENST00000250489 Q8N377 158 aa16.06■□□□□ 0.16
TMEM55B-201ENST00000250489 LINC01547P58512 204 aaPredicted RBP16.05■□□□□ 0.16
TMEM55B-201ENST00000250489 DEFB105AQ8NG35 78 aa16.04■□□□□ 0.16
TMEM55B-201ENST00000250489 CSMD3Q7Z407 3707 aa16.04■□□□□ 0.16
TMEM55B-201ENST00000250489 NBDYA0A0U1RRE5 68 aa16.03■□□□□ 0.16
TMEM55B-201ENST00000250489 Q6ZVQ6 151 aa16.03■□□□□ 0.16
TMEM55B-201ENST00000250489 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.02■□□□□ 0.16
TMEM55B-201ENST00000250489 IGKV2-24A0A0C4DH68 120 aa16.02■□□□□ 0.16
TMEM55B-201ENST00000250489 PLECQ15149 4684 aaKnown RBP16.02■□□□□ 0.16
TMEM55B-201ENST00000250489 REG3GQ6UW15 175 aa16■□□□□ 0.15
TMEM55B-201ENST00000250489 ATOX1O00244 68 aa16■□□□□ 0.15
TMEM55B-201ENST00000250489 A0A1W2PNN7 141 aa15.99■□□□□ 0.15
TMEM55B-201ENST00000250489 DNAH7Q8WXX0 4024 aa15.98■□□□□ 0.15
TMEM55B-201ENST00000250489 LRCOL1A6NCL2 159 aa15.98■□□□□ 0.15
TMEM55B-201ENST00000250489 FAM19A1Q7Z5A9 133 aa15.97■□□□□ 0.15
TMEM55B-201ENST00000250489 ST20-AS1Q8NBB2 130 aa15.96■□□□□ 0.15
TMEM55B-201ENST00000250489 IGLV5-48A0A075B6I7 105 aa15.96■□□□□ 0.15
TMEM55B-201ENST00000250489 ERC2-IT1O76042 136 aa15.95■□□□□ 0.14
TMEM55B-201ENST00000250489 UBE2BP63146 152 aa15.95■□□□□ 0.14
TMEM55B-201ENST00000250489 HAMPP81172 84 aa15.94■□□□□ 0.14
TMEM55B-201ENST00000250489 Q6ZRN7 208 aaPredicted RBP15.94■□□□□ 0.14
TMEM55B-201ENST00000250489 C3orf22Q8N5N4 141 aa15.93■□□□□ 0.14
TMEM55B-201ENST00000250489 C9orf163Q8N9P6 203 aa15.91■□□□□ 0.14
TMEM55B-201ENST00000250489 CHTF8P0CG12 524 aa15.9■□□□□ 0.14
TMEM55B-201ENST00000250489 TENM2Q9NT68 2774 aa15.9■□□□□ 0.14
TMEM55B-201ENST00000250489 UQCRQO14949 82 aa15.89■□□□□ 0.13
TMEM55B-201ENST00000250489 CXCL6P80162 114 aa15.89■□□□□ 0.13
TMEM55B-201ENST00000250489 TNP2Q05952 138 aa15.89■□□□□ 0.13
TMEM55B-201ENST00000250489 COX7CP15954 63 aa15.88■□□□□ 0.13
TMEM55B-201ENST00000250489 PRKDCP78527 4128 aaKnown RBP15.88■□□□□ 0.13
TMEM55B-201ENST00000250489 DNHD1Q96M86 4753 aa15.86■□□□□ 0.13
TMEM55B-201ENST00000250489 STARD9Q9P2P6 4700 aa15.86■□□□□ 0.13
TMEM55B-201ENST00000250489 VPS13DQ5THJ4 4388 aa15.85■□□□□ 0.13
TMEM55B-201ENST00000250489 PKIGQ9Y2B9 76 aa15.84■□□□□ 0.13
TMEM55B-201ENST00000250489 PHF5AQ7RTV0 110 aaKnown RBP15.83■□□□□ 0.12
TMEM55B-201ENST00000250489 PRLHP81277 87 aa15.82■□□□□ 0.12
TMEM55B-201ENST00000250489 C9orf153Q5TBE3 101 aa15.82■□□□□ 0.12
TMEM55B-201ENST00000250489 SERP2Q8N6R1 65 aa15.81■□□□□ 0.12
TMEM55B-201ENST00000250489 C1orf137Q5JT78 98 aa15.8■□□□□ 0.12
TMEM55B-201ENST00000250489 KRTAP11-1Q8IUC1 163 aa15.8■□□□□ 0.12
TMEM55B-201ENST00000250489 SCXQ7RTU7 201 aa15.8■□□□□ 0.12
TMEM55B-201ENST00000250489 SS18L2Q9UHA2 77 aa15.8■□□□□ 0.12
TMEM55B-201ENST00000250489 A0A1W2PNM2 257 aa15.78■□□□□ 0.12
TMEM55B-201ENST00000250489 C3orf84H3BNL1 204 aa15.78■□□□□ 0.12
TMEM55B-201ENST00000250489 SMIM29Q86T20 159 aa15.78■□□□□ 0.12
TMEM55B-201ENST00000250489 FUSP35637 526 aaKnown RBP eCLIP15.76■□□□□ 0.11
TMEM55B-201ENST00000250489 NREPQ16612 68 aa15.76■□□□□ 0.11
TMEM55B-201ENST00000250489 LINC00474Q9P2X8 69 aa15.76■□□□□ 0.11
TMEM55B-201ENST00000250489 MEGF8Q7Z7M0 2845 aa15.76■□□□□ 0.11
TMEM55B-201ENST00000250489 A0A1B0GW54 56 aa15.75■□□□□ 0.11
TMEM55B-201ENST00000250489 KRTAP21-3Q3LHN1 58 aa15.74■□□□□ 0.11
TMEM55B-201ENST00000250489 Q8NBF4 154 aa15.74■□□□□ 0.11
TMEM55B-201ENST00000250489 HIGD2AQ9BW72 106 aa15.74■□□□□ 0.11
TMEM55B-201ENST00000250489 PANO1I0J062 215 aa15.73■□□□□ 0.11
TMEM55B-201ENST00000250489 CRYGAP11844 174 aa15.73■□□□□ 0.11
TMEM55B-201ENST00000250489 A0A087WTM6 91 aa15.71■□□□□ 0.1
TMEM55B-201ENST00000250489 H0Y9J4 135 aa15.7■□□□□ 0.1
TMEM55B-201ENST00000250489 F8WEM9 126 aa15.69■□□□□ 0.1
TMEM55B-201ENST00000250489 LINC00476Q8WZB0 136 aa15.69■□□□□ 0.1
TMEM55B-201ENST00000250489 SPRR4Q96PI1 79 aa15.69■□□□□ 0.1
TMEM55B-201ENST00000250489 EPM2AB3EWF7 344 aa15.68■□□□□ 0.1
TMEM55B-201ENST00000250489 BCE1O60756 84 aa15.68■□□□□ 0.1
TMEM55B-201ENST00000250489 Q6ZR54 194 aa15.68■□□□□ 0.1
TMEM55B-201ENST00000250489 SPACA4Q8TDM5 124 aa15.66■□□□□ 0.1
TMEM55B-201ENST00000250489 BPY2O14599 106 aa15.65■□□□□ 0.1
TMEM55B-201ENST00000250489 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.64■□□□□ 0.09
TMEM55B-201ENST00000250489 Q8N9L7 120 aa15.63■□□□□ 0.09
TMEM55B-201ENST00000250489 DPH3Q96FX2 82 aa15.63■□□□□ 0.09
TMEM55B-201ENST00000250489 IGLV8-61A0A075B6I0 122 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms