RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 C9orf118A6NHY6 69 aa8.15□□□□□ -1.1
LSM8-201ENST00000249299 TAX1BP3O14907 124 aa8.15□□□□□ -1.1
LSM8-201ENST00000249299 TSPAN13O95857 204 aa8.15□□□□□ -1.1
LSM8-201ENST00000249299 FUSP35637 526 aaKnown RBP eCLIP8.15□□□□□ -1.1
LSM8-201ENST00000249299 LINC00167Q96N53 147 aa8.15□□□□□ -1.1
LSM8-201ENST00000249299 TRBV7-6A0A0J9YX20 115 aa8.14□□□□□ -1.11
LSM8-201ENST00000249299 COX6CP09669 75 aa8.14□□□□□ -1.11
LSM8-201ENST00000249299 LYRM7Q5U5X0 104 aa8.14□□□□□ -1.11
LSM8-201ENST00000249299 RYR3Q15413 4870 aa8.13□□□□□ -1.11
LSM8-201ENST00000249299 DNAH5Q8TE73 4624 aa8.13□□□□□ -1.11
LSM8-201ENST00000249299 TRAV23DV6A0A075B6W5 121 aa8.13□□□□□ -1.11
LSM8-201ENST00000249299 PRYO14603 147 aa8.13□□□□□ -1.11
LSM8-201ENST00000249299 Q1RN00 199 aa8.13□□□□□ -1.11
LSM8-201ENST00000249299 SMIM11BQ8TCY0 68 aa8.13□□□□□ -1.11
LSM8-201ENST00000249299 H0YGX0 51 aa8.12□□□□□ -1.11
LSM8-201ENST00000249299 VAMP3Q15836 100 aa8.12□□□□□ -1.11
LSM8-201ENST00000249299 ZNF73O43830 326 aaPredicted RBP8.11□□□□□ -1.11
LSM8-201ENST00000249299 SPRR1AP35321 89 aa8.11□□□□□ -1.11
LSM8-201ENST00000249299 FAM30AQ9NZY2 134 aa8.11□□□□□ -1.11
LSM8-201ENST00000249299 H7C2G1 150 aa8.1□□□□□ -1.11
LSM8-201ENST00000249299 PSMB2P49721 201 aa8.1□□□□□ -1.11
LSM8-201ENST00000249299 CIRBP-AS1Q8TBR5 109 aa8.1□□□□□ -1.11
LSM8-201ENST00000249299 DIRC1Q969H9 104 aa8.1□□□□□ -1.11
LSM8-201ENST00000249299 GAGE10A6NGK3 116 aa8.09□□□□□ -1.11
LSM8-201ENST00000249299 H3BUT2 72 aa8.09□□□□□ -1.11
LSM8-201ENST00000249299 TRIAP1O43715 76 aa8.09□□□□□ -1.11
LSM8-201ENST00000249299 UBE2BP63146 152 aa8.09□□□□□ -1.11
LSM8-201ENST00000249299 TRBV20-1A0A075B6N2 111 aa8.08□□□□□ -1.12
LSM8-201ENST00000249299 A0A1W2PPM0 123 aa8.08□□□□□ -1.12
LSM8-201ENST00000249299 FABP2P12104 132 aa8.08□□□□□ -1.12
LSM8-201ENST00000249299 C6orf99Q4VX62 202 aa8.08□□□□□ -1.12
LSM8-201ENST00000249299 SCXQ7RTU7 201 aa8.08□□□□□ -1.12
LSM8-201ENST00000249299 PHF5AQ7RTV0 110 aaKnown RBP8.08□□□□□ -1.12
LSM8-201ENST00000249299 DNAH8Q96JB1 4490 aa8.07□□□□□ -1.12
LSM8-201ENST00000249299 A0A1B0GX51 115 aa8.07□□□□□ -1.12
LSM8-201ENST00000249299 RPL37AP8A6NKH3 93 aa8.07□□□□□ -1.12
LSM8-201ENST00000249299 SNCGO76070 127 aa8.07□□□□□ -1.12
LSM8-201ENST00000249299 REG3GQ6UW15 175 aa8.07□□□□□ -1.12
LSM8-201ENST00000249299 CDIP1Q9H305 208 aa8.07□□□□□ -1.12
LSM8-201ENST00000249299 KRTAP4-16G5E9R7 235 aaPredicted RBP8.06□□□□□ -1.12
LSM8-201ENST00000249299 H0Y9J4 135 aa8.06□□□□□ -1.12
LSM8-201ENST00000249299 INAFM2P0DMQ5 153 aa8.06□□□□□ -1.12
LSM8-201ENST00000249299 SCGB1C2P0DMR2 95 aa8.06□□□□□ -1.12
LSM8-201ENST00000249299 ELOF1P60002 83 aaKnown RBP8.05□□□□□ -1.12
LSM8-201ENST00000249299 PKHD1P08F94 4074 aa8.05□□□□□ -1.12
LSM8-201ENST00000249299 LRP1BQ9NZR2 4599 aa8.05□□□□□ -1.12
LSM8-201ENST00000249299 COX7BP24311 80 aa8.04□□□□□ -1.12
LSM8-201ENST00000249299 DYNC1H1Q14204 4646 aaKnown RBP8.04□□□□□ -1.12
LSM8-201ENST00000249299 ETDCA0A1B0GVM5 59 aa8.03□□□□□ -1.12
LSM8-201ENST00000249299 BCE1O60756 84 aa8.03□□□□□ -1.12
LSM8-201ENST00000249299 Q6ZRX8 168 aa8.03□□□□□ -1.12
LSM8-201ENST00000249299 SLC25A20O43772 301 aa8.03□□□□□ -1.12
LSM8-201ENST00000249299 DHRS4-AS1Q9P1J3 65 aa8.03□□□□□ -1.12
LSM8-201ENST00000249299 B5MCH6 92 aa8.02□□□□□ -1.13
LSM8-201ENST00000249299 CDK2AP2O75956 126 aa8.02□□□□□ -1.13
LSM8-201ENST00000249299 TRACP01848 142 aa8.02□□□□□ -1.13
LSM8-201ENST00000249299 XGP55808 180 aa8.02□□□□□ -1.13
LSM8-201ENST00000249299 ATXN8Q156A1 80 aa8.02□□□□□ -1.13
LSM8-201ENST00000249299 LINC00575Q6W349 94 aa8.02□□□□□ -1.13
LSM8-201ENST00000249299 GTF2H5Q6ZYL4 71 aa8.02□□□□□ -1.13
LSM8-201ENST00000249299 NAA38Q9BRA0 125 aaKnown RBP8.02□□□□□ -1.13
LSM8-201ENST00000249299 LST1O00453 97 aa8.01□□□□□ -1.13
LSM8-201ENST00000249299 KRTAP11-1Q8IUC1 163 aa8.01□□□□□ -1.13
LSM8-201ENST00000249299 PSORS1C2Q9UIG4 136 aa8.01□□□□□ -1.13
LSM8-201ENST00000249299 SPCS1Q9Y6A9 102 aa8.01□□□□□ -1.13
LSM8-201ENST00000249299 H3BQ85 93 aa8□□□□□ -1.13
LSM8-201ENST00000249299 hADV29S1A0JD25 119 aa7.99□□□□□ -1.13
LSM8-201ENST00000249299 K7EP34 96 aa7.99□□□□□ -1.13
LSM8-201ENST00000249299 TCL1BO95988 128 aa7.99□□□□□ -1.13
LSM8-201ENST00000249299 OCIAD2Q56VL3 154 aa7.98□□□□□ -1.13
LSM8-201ENST00000249299 FAM19A1Q7Z5A9 133 aa7.98□□□□□ -1.13
LSM8-201ENST00000249299 KRTAP13-1Q8IUC0 172 aa7.98□□□□□ -1.13
LSM8-201ENST00000249299 UBE2AP49459 152 aa7.97□□□□□ -1.13
LSM8-201ENST00000249299 CLEC2BQ92478 149 aa7.97□□□□□ -1.13
LSM8-201ENST00000249299 KRTAP4-9Q9BYQ8 210 aa7.97□□□□□ -1.13
LSM8-201ENST00000249299 DNAL4O96015 105 aa7.96□□□□□ -1.14
LSM8-201ENST00000249299 C1orf137Q5JT78 98 aa7.96□□□□□ -1.14
LSM8-201ENST00000249299 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.96□□□□□ -1.14
LSM8-201ENST00000249299 FAM218AQ96MZ4 157 aa7.96□□□□□ -1.14
LSM8-201ENST00000249299 ZNF861PO60384 105 aa7.95□□□□□ -1.14
LSM8-201ENST00000249299 PPDPFLQ8WWR9 84 aa7.95□□□□□ -1.14
LSM8-201ENST00000249299 Q9BRP9 147 aa7.95□□□□□ -1.14
LSM8-201ENST00000249299 A0A1B0GV90 55 aa7.94□□□□□ -1.14
LSM8-201ENST00000249299 IGLV7-43P04211 117 aa7.94□□□□□ -1.14
LSM8-201ENST00000249299 UBE2V1Q13404 147 aa7.94□□□□□ -1.14
LSM8-201ENST00000249299 H3BMG7 143 aa7.93□□□□□ -1.14
LSM8-201ENST00000249299 SMCR5Q8TEV8 140 aa7.93□□□□□ -1.14
LSM8-201ENST00000249299 LINC01600Q96MT4 127 aa7.93□□□□□ -1.14
LSM8-201ENST00000249299 PRLHP81277 87 aa7.92□□□□□ -1.14
LSM8-201ENST00000249299 APOBP04114 4563 aaKnown RBP7.92□□□□□ -1.14
LSM8-201ENST00000249299 HAMPP81172 84 aa7.91□□□□□ -1.14
LSM8-201ENST00000249299 ORMDL1Q9P0S3 153 aa7.91□□□□□ -1.14
LSM8-201ENST00000249299 F8W1H4 67 aa7.9□□□□□ -1.14
LSM8-201ENST00000249299 H3BT86 120 aa7.9□□□□□ -1.14
LSM8-201ENST00000249299 TMEM256-PLSCR3K7ERE1 68 aa7.9□□□□□ -1.14
LSM8-201ENST00000249299 RPL37AP61513 92 aaKnown RBP7.9□□□□□ -1.14
LSM8-201ENST00000249299 Q6ZQY7 126 aa7.9□□□□□ -1.14
LSM8-201ENST00000249299 HIGD2AQ9BW72 106 aa7.9□□□□□ -1.14
LSM8-201ENST00000249299 ZNF706Q9Y5V0 76 aaPredicted RBP7.9□□□□□ -1.14
LSM8-201ENST00000249299 IGLV5-48A0A075B6I7 105 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms