RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 REG3GQ6UW15 175 aa12.37□□□□□ -0.43
SNRPA-201ENST00000243563 KRTAP4-16G5E9R7 235 aaPredicted RBP12.36□□□□□ -0.43
SNRPA-201ENST00000243563 SPRR1AP35321 89 aa12.36□□□□□ -0.43
SNRPA-201ENST00000243563 Q5VSD8 79 aa12.36□□□□□ -0.43
SNRPA-201ENST00000243563 SMIM11BQ8TCY0 68 aa12.36□□□□□ -0.43
SNRPA-201ENST00000243563 RAB37Q96AX2 223 aa12.36□□□□□ -0.43
SNRPA-201ENST00000243563 H7C2G1 150 aa12.35□□□□□ -0.43
SNRPA-201ENST00000243563 M0R143 59 aa12.35□□□□□ -0.43
SNRPA-201ENST00000243563 BATFQ16520 125 aa12.34□□□□□ -0.43
SNRPA-201ENST00000243563 Q8N1X5 172 aa12.34□□□□□ -0.43
SNRPA-201ENST00000243563 ZNF73O43830 326 aaPredicted RBP12.33□□□□□ -0.44
SNRPA-201ENST00000243563 BCE1O60756 84 aa12.33□□□□□ -0.44
SNRPA-201ENST00000243563 PRO1854Q9UHT4 67 aa12.33□□□□□ -0.44
SNRPA-201ENST00000243563 PRLHP81277 87 aa12.32□□□□□ -0.44
SNRPA-201ENST00000243563 KRTAP4-5Q9BYR2 181 aa12.32□□□□□ -0.44
SNRPA-201ENST00000243563 C6orf99Q4VX62 202 aa12.31□□□□□ -0.44
SNRPA-201ENST00000243563 KRTAP13-1Q8IUC0 172 aa12.31□□□□□ -0.44
SNRPA-201ENST00000243563 IGLV7-43P04211 117 aa12.3□□□□□ -0.44
SNRPA-201ENST00000243563 FAM19A1Q7Z5A9 133 aa12.3□□□□□ -0.44
SNRPA-201ENST00000243563 SNHG12Q9BXW3 62 aa12.3□□□□□ -0.44
SNRPA-201ENST00000243563 FAM229AH3BQW9 127 aa12.29□□□□□ -0.44
SNRPA-201ENST00000243563 PKHD1L1Q86WI1 4243 aa12.29□□□□□ -0.44
SNRPA-201ENST00000243563 B5MCH6 92 aa12.29□□□□□ -0.44
SNRPA-201ENST00000243563 DIRC1Q969H9 104 aa12.28□□□□□ -0.44
SNRPA-201ENST00000243563 TSPAN13O95857 204 aa12.27□□□□□ -0.44
SNRPA-201ENST00000243563 SRRM2Q9UQ35 2752 aaKnown RBP12.27□□□□□ -0.44
SNRPA-201ENST00000243563 ETDCA0A1B0GVM5 59 aa12.26□□□□□ -0.45
SNRPA-201ENST00000243563 PLA2G1BP04054 148 aaKnown RBP12.26□□□□□ -0.45
SNRPA-201ENST00000243563 RPL28P46779 137 aaKnown RBP12.26□□□□□ -0.45
SNRPA-201ENST00000243563 Q9BRP9 147 aa12.25□□□□□ -0.45
SNRPA-201ENST00000243563 UBE2AP49459 152 aa12.24□□□□□ -0.45
SNRPA-201ENST00000243563 Q1RN00 199 aa12.24□□□□□ -0.45
SNRPA-201ENST00000243563 Q6ZRX8 168 aa12.23□□□□□ -0.45
SNRPA-201ENST00000243563 ZNF861PO60384 105 aa12.22□□□□□ -0.45
SNRPA-201ENST00000243563 ELOF1P60002 83 aaKnown RBP12.22□□□□□ -0.45
SNRPA-201ENST00000243563 SMCR5Q8TEV8 140 aa12.22□□□□□ -0.45
SNRPA-201ENST00000243563 NAA38Q9BRA0 125 aaKnown RBP12.22□□□□□ -0.45
SNRPA-201ENST00000243563 TRIAP1O43715 76 aa12.22□□□□□ -0.45
SNRPA-201ENST00000243563 COX7BP24311 80 aa12.22□□□□□ -0.45
SNRPA-201ENST00000243563 CBY1Q9Y3M2 126 aa12.22□□□□□ -0.45
SNRPA-201ENST00000243563 ERC2-IT1O76042 136 aa12.2□□□□□ -0.46
SNRPA-201ENST00000243563 H0Y9J4 135 aa12.19□□□□□ -0.46
SNRPA-201ENST00000243563 HIGD2AQ9BW72 106 aa12.19□□□□□ -0.46
SNRPA-201ENST00000243563 TRBV7-6A0A0J9YX20 115 aa12.18□□□□□ -0.46
SNRPA-201ENST00000243563 TAX1BP3O14907 124 aa12.18□□□□□ -0.46
SNRPA-201ENST00000243563 ABCA13Q86UQ4 5058 aa12.18□□□□□ -0.46
SNRPA-201ENST00000243563 FAM218AQ96MZ4 157 aa12.16□□□□□ -0.46
SNRPA-201ENST00000243563 PSMB2P49721 201 aa12.15□□□□□ -0.47
SNRPA-201ENST00000243563 SPINK6Q6UWN8 80 aa12.13□□□□□ -0.47
SNRPA-201ENST00000243563 LINC00575Q6W349 94 aa12.13□□□□□ -0.47
SNRPA-201ENST00000243563 CLEC2BQ92478 149 aa12.13□□□□□ -0.47
SNRPA-201ENST00000243563 VAMP3Q15836 100 aa12.11□□□□□ -0.47
SNRPA-201ENST00000243563 ST20-AS1Q8NBB2 130 aa12.11□□□□□ -0.47
SNRPA-201ENST00000243563 H3BUT2 72 aa12.1□□□□□ -0.47
SNRPA-201ENST00000243563 COL5A1-AS1Q5SY13 56 aa12.09□□□□□ -0.47
SNRPA-201ENST00000243563 C9orf118A6NHY6 69 aa12.08□□□□□ -0.48
SNRPA-201ENST00000243563 DHRS4-AS1Q9P1J3 65 aa12.08□□□□□ -0.48
SNRPA-201ENST00000243563 KRTAP1-4P0C5Y4 121 aa12.08□□□□□ -0.48
SNRPA-201ENST00000243563 ANAPC11Q9NYG5 84 aa12.08□□□□□ -0.48
SNRPA-201ENST00000243563 H0YGX0 51 aa12.07□□□□□ -0.48
SNRPA-201ENST00000243563 INAFM2P0DMQ5 153 aa12.07□□□□□ -0.48
SNRPA-201ENST00000243563 LRP1Q07954 4544 aaKnown RBP12.06□□□□□ -0.48
SNRPA-201ENST00000243563 hADV29S1A0JD25 119 aa12.05□□□□□ -0.48
SNRPA-201ENST00000243563 SPRR4Q96PI1 79 aa12.05□□□□□ -0.48
SNRPA-201ENST00000243563 FLG2Q5D862 2391 aaPredicted RBP12.05□□□□□ -0.48
SNRPA-201ENST00000243563 SCGB1C2P0DMR2 95 aa12.04□□□□□ -0.48
SNRPA-201ENST00000243563 FAT3Q8TDW7 4589 aa12.03□□□□□ -0.48
SNRPA-201ENST00000243563 COX6CP09669 75 aa12.03□□□□□ -0.48
SNRPA-201ENST00000243563 LINC01547P58512 204 aaPredicted RBP12.03□□□□□ -0.48
SNRPA-201ENST00000243563 MYCBP2O75592 4640 aa12.02□□□□□ -0.48
SNRPA-201ENST00000243563 Q6ZQY7 126 aa12.02□□□□□ -0.49
SNRPA-201ENST00000243563 TCL1BO95988 128 aa12.01□□□□□ -0.49
SNRPA-201ENST00000243563 A0A1W2PPM0 123 aa12□□□□□ -0.49
SNRPA-201ENST00000243563 SLC25A20O43772 301 aa12□□□□□ -0.49
SNRPA-201ENST00000243563 GAGE2AQ6NT46 116 aa12□□□□□ -0.49
SNRPA-201ENST00000243563 LST1O00453 97 aa12□□□□□ -0.49
SNRPA-201ENST00000243563 DEFB105AQ8NG35 78 aa11.99□□□□□ -0.49
SNRPA-201ENST00000243563 A0A087X002 238 aa11.97□□□□□ -0.49
SNRPA-201ENST00000243563 LINC00483Q53H64 154 aa11.97□□□□□ -0.49
SNRPA-201ENST00000243563 IGLV5-48A0A075B6I7 105 aa11.97□□□□□ -0.49
SNRPA-201ENST00000243563 Q8N377 158 aa11.96□□□□□ -0.5
SNRPA-201ENST00000243563 ZNF706Q9Y5V0 76 aaPredicted RBP11.96□□□□□ -0.5
SNRPA-201ENST00000243563 PCLOQ9Y6V0 5065 aa11.96□□□□□ -0.5
SNRPA-201ENST00000243563 A0A1B0GX51 115 aa11.95□□□□□ -0.5
SNRPA-201ENST00000243563 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.95□□□□□ -0.5
SNRPA-201ENST00000243563 C3orf22Q8N5N4 141 aa11.94□□□□□ -0.5
SNRPA-201ENST00000243563 SPRR1BP22528 89 aa11.93□□□□□ -0.5
SNRPA-201ENST00000243563 PRR26Q8N8Z3 221 aa11.93□□□□□ -0.5
SNRPA-201ENST00000243563 FABP2P12104 132 aa11.93□□□□□ -0.5
SNRPA-201ENST00000243563 KRTAP13-2Q52LG2 175 aa11.93□□□□□ -0.5
SNRPA-201ENST00000243563 SMIM29Q86T20 159 aa11.93□□□□□ -0.5
SNRPA-201ENST00000243563 TRACP01848 142 aa11.92□□□□□ -0.5
SNRPA-201ENST00000243563 ATXN8Q156A1 80 aa11.91□□□□□ -0.5
SNRPA-201ENST00000243563 TEX49A0A1B0GTD5 131 aa11.9□□□□□ -0.5
SNRPA-201ENST00000243563 LYRM7Q5U5X0 104 aa11.9□□□□□ -0.5
SNRPA-201ENST00000243563 LINC01600Q96MT4 127 aa11.9□□□□□ -0.5
SNRPA-201ENST00000243563 TNXBP22105 4242 aa11.9□□□□□ -0.5
SNRPA-201ENST00000243563 SPCS1Q9Y6A9 102 aa11.89□□□□□ -0.51
SNRPA-201ENST00000243563 FAM229BQ4G0N7 80 aa11.88□□□□□ -0.51
SNRPA-201ENST00000243563 TRBV20-1A0A075B6N2 111 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms