RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 FUSP35637 526 aaKnown RBP eCLIP9.65□□□□□ -0.86
HDHD3-201ENST00000238379 TEN1Q86WV5 123 aa9.65□□□□□ -0.86
HDHD3-201ENST00000238379 DNAL4O96015 105 aa9.64□□□□□ -0.87
HDHD3-201ENST00000238379 ELOF1P60002 83 aaKnown RBP9.64□□□□□ -0.87
HDHD3-201ENST00000238379 OCIAD2Q56VL3 154 aa9.64□□□□□ -0.87
HDHD3-201ENST00000238379 LINC00474Q9P2X8 69 aa9.64□□□□□ -0.87
HDHD3-201ENST00000238379 PANO1I0J062 215 aa9.63□□□□□ -0.87
HDHD3-201ENST00000238379 BAALC-AS2P0C853 105 aa9.63□□□□□ -0.87
HDHD3-201ENST00000238379 COX7BP24311 80 aa9.63□□□□□ -0.87
HDHD3-201ENST00000238379 PRYO14603 147 aa9.61□□□□□ -0.87
HDHD3-201ENST00000238379 IGLV5-52A0A0A0MRZ9 124 aa9.61□□□□□ -0.87
HDHD3-201ENST00000238379 hADV29S1A0JD25 119 aa9.61□□□□□ -0.87
HDHD3-201ENST00000238379 SPRR1AP35321 89 aa9.61□□□□□ -0.87
HDHD3-201ENST00000238379 LINC00528Q8N1L1 170 aa9.61□□□□□ -0.87
HDHD3-201ENST00000238379 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.61□□□□□ -0.87
HDHD3-201ENST00000238379 KRTAP4-16G5E9R7 235 aaPredicted RBP9.6□□□□□ -0.87
HDHD3-201ENST00000238379 SPACA4Q8TDM5 124 aa9.6□□□□□ -0.87
HDHD3-201ENST00000238379 DNAH17Q9UFH2 4485 aa9.6□□□□□ -0.87
HDHD3-201ENST00000238379 SNCGO76070 127 aa9.59□□□□□ -0.87
HDHD3-201ENST00000238379 LCE6AA0A183 80 aa9.58□□□□□ -0.88
HDHD3-201ENST00000238379 PPDPFLQ8WWR9 84 aa9.58□□□□□ -0.88
HDHD3-201ENST00000238379 ORMDL1Q9P0S3 153 aa9.58□□□□□ -0.88
HDHD3-201ENST00000238379 EPM2AB3EWF7 344 aa9.57□□□□□ -0.88
HDHD3-201ENST00000238379 K7ERU9 68 aa9.57□□□□□ -0.88
HDHD3-201ENST00000238379 PHF5AQ7RTV0 110 aaKnown RBP9.57□□□□□ -0.88
HDHD3-201ENST00000238379 TEX49A0A1B0GTD5 131 aa9.56□□□□□ -0.88
HDHD3-201ENST00000238379 B5MCH6 92 aa9.56□□□□□ -0.88
HDHD3-201ENST00000238379 REG3GQ6UW15 175 aa9.56□□□□□ -0.88
HDHD3-201ENST00000238379 DPH3Q96FX2 82 aa9.56□□□□□ -0.88
HDHD3-201ENST00000238379 HYDINQ4G0P3 5121 aa9.55□□□□□ -0.88
HDHD3-201ENST00000238379 KRTAP10-2P60368 255 aa9.55□□□□□ -0.88
HDHD3-201ENST00000238379 Q6ZRX8 168 aa9.55□□□□□ -0.88
HDHD3-201ENST00000238379 Q6ZQY7 126 aa9.54□□□□□ -0.88
HDHD3-201ENST00000238379 KRTAP11-1Q8IUC1 163 aa9.54□□□□□ -0.88
HDHD3-201ENST00000238379 ETDCA0A1B0GVM5 59 aa9.54□□□□□ -0.88
HDHD3-201ENST00000238379 INAFM2P0DMQ5 153 aa9.54□□□□□ -0.88
HDHD3-201ENST00000238379 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.53□□□□□ -0.88
HDHD3-201ENST00000238379 HECTD4Q9Y4D8 3996 aa9.52□□□□□ -0.88
HDHD3-201ENST00000238379 TMEM256-PLSCR3K7ERE1 68 aa9.52□□□□□ -0.89
HDHD3-201ENST00000238379 J3QR89 54 aa9.52□□□□□ -0.89
HDHD3-201ENST00000238379 UBE2BP63146 152 aa9.52□□□□□ -0.89
HDHD3-201ENST00000238379 Q9BRP9 147 aa9.52□□□□□ -0.89
HDHD3-201ENST00000238379 PLAC8Q9NZF1 115 aa9.5□□□□□ -0.89
HDHD3-201ENST00000238379 DHRS4-AS1Q9P1J3 65 aa9.5□□□□□ -0.89
HDHD3-201ENST00000238379 FRAS1Q86XX4 4008 aa9.5□□□□□ -0.89
HDHD3-201ENST00000238379 OBSCN-AS1Q96MR7 158 aa9.49□□□□□ -0.89
HDHD3-201ENST00000238379 SACSQ9NZJ4 4579 aa9.48□□□□□ -0.89
HDHD3-201ENST00000238379 H3BQ85 93 aa9.47□□□□□ -0.89
HDHD3-201ENST00000238379 DNAH11Q96DT5 4516 aa9.46□□□□□ -0.89
HDHD3-201ENST00000238379 FAM19A1Q7Z5A9 133 aa9.46□□□□□ -0.9
HDHD3-201ENST00000238379 FAT2Q9NYQ8 4349 aa9.46□□□□□ -0.9
HDHD3-201ENST00000238379 ERC2-IT1O76042 136 aa9.45□□□□□ -0.9
HDHD3-201ENST00000238379 GHRHP01286 108 aa9.45□□□□□ -0.9
HDHD3-201ENST00000238379 PRLHP81277 87 aa9.45□□□□□ -0.9
HDHD3-201ENST00000238379 SMCR5Q8TEV8 140 aa9.45□□□□□ -0.9
HDHD3-201ENST00000238379 FAM30AQ9NZY2 134 aa9.44□□□□□ -0.9
HDHD3-201ENST00000238379 JMJD7-PLA2G4BH0Y9G9 81 aa9.43□□□□□ -0.9
HDHD3-201ENST00000238379 H0Y9J4 135 aa9.43□□□□□ -0.9
HDHD3-201ENST00000238379 LINC01547P58512 204 aaPredicted RBP9.43□□□□□ -0.9
HDHD3-201ENST00000238379 KRTAP10-1P60331 282 aa9.43□□□□□ -0.9
HDHD3-201ENST00000238379 LINC00336Q6ZUF6 198 aa9.42□□□□□ -0.9
HDHD3-201ENST00000238379 C14orf132Q9NPU4 83 aa9.42□□□□□ -0.9
HDHD3-201ENST00000238379 A0A1B0GV72 72 aa9.42□□□□□ -0.9
HDHD3-201ENST00000238379 BCE1O60756 84 aa9.42□□□□□ -0.9
HDHD3-201ENST00000238379 Q6ZSA8 131 aa9.42□□□□□ -0.9
HDHD3-201ENST00000238379 ST20-AS1Q8NBB2 130 aa9.42□□□□□ -0.9
HDHD3-201ENST00000238379 LAMTOR3Q9UHA4 124 aa9.42□□□□□ -0.9
HDHD3-201ENST00000238379 PKD1P98161 4303 aa9.41□□□□□ -0.9
HDHD3-201ENST00000238379 Q8N377 158 aa9.41□□□□□ -0.9
HDHD3-201ENST00000238379 IGLV5-48A0A075B6I7 105 aa9.4□□□□□ -0.9
HDHD3-201ENST00000238379 DEFB105AQ8NG35 78 aa9.4□□□□□ -0.9
HDHD3-201ENST00000238379 NDUFV3P56181 108 aaKnown RBP9.4□□□□□ -0.91
HDHD3-201ENST00000238379 HIGD2AQ9BW72 106 aa9.4□□□□□ -0.91
HDHD3-201ENST00000238379 KRTAP13-1Q8IUC0 172 aa9.39□□□□□ -0.91
HDHD3-201ENST00000238379 CIRBP-AS1Q8TBR5 109 aa9.39□□□□□ -0.91
HDHD3-201ENST00000238379 VPS25Q9BRG1 176 aa9.38□□□□□ -0.91
HDHD3-201ENST00000238379 UBE2AP49459 152 aa9.38□□□□□ -0.91
HDHD3-201ENST00000238379 RBM3P98179 157 aaKnown RBP9.38□□□□□ -0.91
HDHD3-201ENST00000238379 PSORS1C2Q9UIG4 136 aa9.38□□□□□ -0.91
HDHD3-201ENST00000238379 DNAH5Q8TE73 4624 aa9.37□□□□□ -0.91
HDHD3-201ENST00000238379 FAM240AA0A1B0GVK7 77 aa9.37□□□□□ -0.91
HDHD3-201ENST00000238379 SCXQ7RTU7 201 aa9.36□□□□□ -0.91
HDHD3-201ENST00000238379 CDIP1Q9H305 208 aa9.36□□□□□ -0.91
HDHD3-201ENST00000238379 SRRM2Q9UQ35 2752 aaKnown RBP9.35□□□□□ -0.91
HDHD3-201ENST00000238379 A0A1B0GVY2 172 aa9.34□□□□□ -0.91
HDHD3-201ENST00000238379 GAGE2AQ6NT46 116 aa9.34□□□□□ -0.91
HDHD3-201ENST00000238379 LOC110117498A0A087WWA1 95 aa9.33□□□□□ -0.92
HDHD3-201ENST00000238379 CCKP06307 115 aa9.33□□□□□ -0.92
HDHD3-201ENST00000238379 C3orf22Q8N5N4 141 aa9.33□□□□□ -0.92
HDHD3-201ENST00000238379 ACYP1P07311 99 aa9.33□□□□□ -0.92
HDHD3-201ENST00000238379 RYR2Q92736 4967 aa9.33□□□□□ -0.92
HDHD3-201ENST00000238379 DNAH8Q96JB1 4490 aa9.33□□□□□ -0.92
HDHD3-201ENST00000238379 KMT2CQ8NEZ4 4911 aaKnown RBP9.33□□□□□ -0.92
HDHD3-201ENST00000238379 TRBV7-4A0A0J9YYF1 115 aa9.32□□□□□ -0.92
HDHD3-201ENST00000238379 C1orf137Q5JT78 98 aa9.32□□□□□ -0.92
HDHD3-201ENST00000238379 Q6ZQT0 140 aa9.32□□□□□ -0.92
HDHD3-201ENST00000238379 DSCR8Q96T75 97 aa9.32□□□□□ -0.92
HDHD3-201ENST00000238379 SMIM29Q86T20 159 aa9.31□□□□□ -0.92
HDHD3-201ENST00000238379 HAMPP81172 84 aa9.31□□□□□ -0.92
HDHD3-201ENST00000238379 PDE6GP18545 87 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms