RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 OTOGLQ3ZCN5 2332 aa8.14□□□□□ -1.11
VAMP4-201ENST00000236192 A0A087X002 238 aa8.14□□□□□ -1.11
VAMP4-201ENST00000236192 CRIPTQ9P021 101 aa8.13□□□□□ -1.11
VAMP4-201ENST00000236192 ADM2Q7Z4H4 148 aa8.13□□□□□ -1.11
VAMP4-201ENST00000236192 DMAC1Q96GE9 116 aa8.11□□□□□ -1.11
VAMP4-201ENST00000236192 CUL9Q8IWT3 2517 aa8.11□□□□□ -1.11
VAMP4-201ENST00000236192 UTRNP46939 3433 aa8.11□□□□□ -1.11
VAMP4-201ENST00000236192 KRTAP29-1A8MX34 341 aaPredicted RBP8.1□□□□□ -1.11
VAMP4-201ENST00000236192 SPATA8Q6RVD6 105 aa8.1□□□□□ -1.11
VAMP4-201ENST00000236192 C19orf73Q9NVV2 129 aa8.1□□□□□ -1.11
VAMP4-201ENST00000236192 TNP2Q05952 138 aa8.1□□□□□ -1.11
VAMP4-201ENST00000236192 CEP350Q5VT06 3117 aa8.08□□□□□ -1.12
VAMP4-201ENST00000236192 FN1P02751 2386 aaKnown RBP8.07□□□□□ -1.12
VAMP4-201ENST00000236192 SPRR1AP35321 89 aa8.07□□□□□ -1.12
VAMP4-201ENST00000236192 DNAH10OSP0CZ25 163 aa8.07□□□□□ -1.12
VAMP4-201ENST00000236192 LINC00472Q9H8W2 130 aa8.07□□□□□ -1.12
VAMP4-201ENST00000236192 PTPN13Q12923 2485 aa8.04□□□□□ -1.12
VAMP4-201ENST00000236192 PIEZO2Q9H5I5 2752 aa8.04□□□□□ -1.12
VAMP4-201ENST00000236192 CR1P17927 2039 aa8.04□□□□□ -1.12
VAMP4-201ENST00000236192 MYO9AB2RTY4 2548 aa8.03□□□□□ -1.12
VAMP4-201ENST00000236192 Q6ZR54 194 aa8.02□□□□□ -1.13
VAMP4-201ENST00000236192 KRTAP16-1A8MUX0 517 aa8□□□□□ -1.13
VAMP4-201ENST00000236192 KRTAP25-1Q3LHN0 102 aa7.99□□□□□ -1.13
VAMP4-201ENST00000236192 CHTF8P0CG12 524 aa7.98□□□□□ -1.13
VAMP4-201ENST00000236192 A0A1B0GU33 70 aa7.97□□□□□ -1.13
VAMP4-201ENST00000236192 RTL8CO15255 209 aa7.97□□□□□ -1.13
VAMP4-201ENST00000236192 IGLV7-43P04211 117 aa7.96□□□□□ -1.14
VAMP4-201ENST00000236192 ZFHX2Q9C0A1 2572 aaPredicted RBP7.96□□□□□ -1.14
VAMP4-201ENST00000236192 ZNF462Q96JM2 2506 aa7.96□□□□□ -1.14
VAMP4-201ENST00000236192 ROMO1P60602 79 aa7.95□□□□□ -1.14
VAMP4-201ENST00000236192 TLN1Q9Y490 2541 aaKnown RBP7.94□□□□□ -1.14
VAMP4-201ENST00000236192 SONP18583 2426 aaKnown RBP7.94□□□□□ -1.14
VAMP4-201ENST00000236192 A0A0A0MQY5 61 aa7.92□□□□□ -1.14
VAMP4-201ENST00000236192 SPACA4Q8TDM5 124 aa7.91□□□□□ -1.14
VAMP4-201ENST00000236192 APLNQ9ULZ1 77 aa7.91□□□□□ -1.14
VAMP4-201ENST00000236192 Q96NJ1 140 aa7.91□□□□□ -1.14
VAMP4-201ENST00000236192 FAM208BQ5VWN6 2430 aa7.91□□□□□ -1.14
VAMP4-201ENST00000236192 LY6G6CO95867 125 aa7.9□□□□□ -1.14
VAMP4-201ENST00000236192 KRTAP26-1Q6PEX3 210 aa7.9□□□□□ -1.14
VAMP4-201ENST00000236192 TLN2Q9Y4G6 2542 aa7.9□□□□□ -1.14
VAMP4-201ENST00000236192 SPRR1BP22528 89 aa7.9□□□□□ -1.14
VAMP4-201ENST00000236192 KRTAP10-9P60411 292 aa7.9□□□□□ -1.15
VAMP4-201ENST00000236192 KRTAP4-16G5E9R7 235 aaPredicted RBP7.89□□□□□ -1.15
VAMP4-201ENST00000236192 HIVEP2P31629 2446 aa7.88□□□□□ -1.15
VAMP4-201ENST00000236192 PRRC2CQ9Y520 2896 aaKnown RBP7.87□□□□□ -1.15
VAMP4-201ENST00000236192 Q8N1X5 172 aa7.87□□□□□ -1.15
VAMP4-201ENST00000236192 Q5W150 140 aa7.86□□□□□ -1.15
VAMP4-201ENST00000236192 NUPR2A6NF83 97 aa7.86□□□□□ -1.15
VAMP4-201ENST00000236192 NAV2Q8IVL1 2488 aa7.85□□□□□ -1.15
VAMP4-201ENST00000236192 INAFM1C9JVW0 142 aa7.85□□□□□ -1.15
VAMP4-201ENST00000236192 CASC10Q5T4H9 136 aa7.85□□□□□ -1.15
VAMP4-201ENST00000236192 IGLV5-52A0A0A0MRZ9 124 aa7.85□□□□□ -1.15
VAMP4-201ENST00000236192 ACACBO00763 2458 aa7.85□□□□□ -1.15
VAMP4-201ENST00000236192 C5orf42Q9H799 3197 aa7.84□□□□□ -1.16
VAMP4-201ENST00000236192 PLAC8Q9NZF1 115 aa7.82□□□□□ -1.16
VAMP4-201ENST00000236192 HIVEP3Q5T1R4 2406 aa7.82□□□□□ -1.16
VAMP4-201ENST00000236192 LUZP6Q538Z0 58 aa7.81□□□□□ -1.16
VAMP4-201ENST00000236192 ZNF861PO60384 105 aa7.81□□□□□ -1.16
VAMP4-201ENST00000236192 A0A0D9SG42 100 aa7.78□□□□□ -1.16
VAMP4-201ENST00000236192 ANAPC11Q9NYG5 84 aa7.77□□□□□ -1.17
VAMP4-201ENST00000236192 K7EIL1 84 aa7.77□□□□□ -1.17
VAMP4-201ENST00000236192 USP9XQ93008 2570 aaPredicted RBP7.77□□□□□ -1.17
VAMP4-201ENST00000236192 NDUFAF8A1L188 74 aa7.75□□□□□ -1.17
VAMP4-201ENST00000236192 F8P00451 2351 aa7.74□□□□□ -1.17
VAMP4-201ENST00000236192 JMJD1CQ15652 2540 aa7.74□□□□□ -1.17
VAMP4-201ENST00000236192 CFAP54Q96N23 3096 aa7.73□□□□□ -1.17
VAMP4-201ENST00000236192 CHD7Q9P2D1 2997 aa7.73□□□□□ -1.17
VAMP4-201ENST00000236192 H1FX-AS1Q4G0G2 97 aa7.71□□□□□ -1.17
VAMP4-201ENST00000236192 PKD1L2Q7Z442 2459 aa7.71□□□□□ -1.18
VAMP4-201ENST00000236192 SMR3AQ99954 134 aa7.71□□□□□ -1.18
VAMP4-201ENST00000236192 A8MUU9 505 aa7.7□□□□□ -1.18
VAMP4-201ENST00000236192 CCDC168Q8NDH2 2452 aa7.69□□□□□ -1.18
VAMP4-201ENST00000236192 PSORS1C2Q9UIG4 136 aa7.67□□□□□ -1.18
VAMP4-201ENST00000236192 USP9YO00507 2555 aaPredicted RBP7.67□□□□□ -1.18
VAMP4-201ENST00000236192 SETD2Q9BYW2 2564 aaPredicted RBP7.67□□□□□ -1.18
VAMP4-201ENST00000236192 NBDYA0A0U1RRE5 68 aa7.66□□□□□ -1.18
VAMP4-201ENST00000236192 CACNA1AO00555 2505 aa7.66□□□□□ -1.18
VAMP4-201ENST00000236192 RPL37P61927 97 aaKnown RBP7.65□□□□□ -1.18
VAMP4-201ENST00000236192 TYMSOSQ8TAI1 123 aa7.65□□□□□ -1.18
VAMP4-201ENST00000236192 LINC00483Q53H64 154 aa7.65□□□□□ -1.18
VAMP4-201ENST00000236192 TTC28Q96AY4 2481 aa7.65□□□□□ -1.19
VAMP4-201ENST00000236192 PANO1I0J062 215 aa7.64□□□□□ -1.19
VAMP4-201ENST00000236192 ABCA2Q9BZC7 2435 aa7.63□□□□□ -1.19
VAMP4-201ENST00000236192 IGF2RP11717 2491 aa7.63□□□□□ -1.19
VAMP4-201ENST00000236192 LAMA2P24043 3122 aaKnown RBP7.63□□□□□ -1.19
VAMP4-201ENST00000236192 KRTAP10-3P60369 221 aa7.62□□□□□ -1.19
VAMP4-201ENST00000236192 NOTCH2Q04721 2471 aa7.61□□□□□ -1.19
VAMP4-201ENST00000236192 BDP1A6H8Y1 2624 aa7.6□□□□□ -1.19
VAMP4-201ENST00000236192 LINC00304Q8N9R0 145 aa7.59□□□□□ -1.19
VAMP4-201ENST00000236192 ABCA12Q86UK0 2595 aa7.59□□□□□ -1.2
VAMP4-201ENST00000236192 MUC6Q6W4X9 2439 aa7.58□□□□□ -1.2
VAMP4-201ENST00000236192 NOTCH2NLQ7Z3S9 236 aa7.58□□□□□ -1.2
VAMP4-201ENST00000236192 CHD9Q3L8U1 2897 aa7.58□□□□□ -1.2
VAMP4-201ENST00000236192 NBEAQ8NFP9 2946 aa7.58□□□□□ -1.2
VAMP4-201ENST00000236192 DOPEY1Q5JWR5 2465 aa7.57□□□□□ -1.2
VAMP4-201ENST00000236192 C20orf166-AS1Q96NR2 134 aa7.57□□□□□ -1.2
VAMP4-201ENST00000236192 ZFYVE26Q68DK2 2539 aa7.56□□□□□ -1.2
VAMP4-201ENST00000236192 ANKRD11Q6UB99 2663 aaPredicted RBP7.56□□□□□ -1.2
VAMP4-201ENST00000236192 HTTP42858 3142 aa7.56□□□□□ -1.2
VAMP4-201ENST00000236192 DNAH14Q0VDD8 3507 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms