RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 C3orf84H3BNL1 204 aa9.81□□□□□ -0.84
PAF1-201ENST00000221265 CCKP06307 115 aa9.81□□□□□ -0.84
PAF1-201ENST00000221265 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.79□□□□□ -0.84
PAF1-201ENST00000221265 FAM236AA0A1B0GUQ0 79 aa9.79□□□□□ -0.84
PAF1-201ENST00000221265 FAM236BA0A1B0GV22 79 aa9.79□□□□□ -0.84
PAF1-201ENST00000221265 CCDC179H3BU77 68 aa9.79□□□□□ -0.84
PAF1-201ENST00000221265 FRAS1Q86XX4 4008 aa9.79□□□□□ -0.84
PAF1-201ENST00000221265 TRAV23DV6A0A075B6W5 121 aa9.79□□□□□ -0.84
PAF1-201ENST00000221265 VPREB1P12018 145 aa9.79□□□□□ -0.84
PAF1-201ENST00000221265 DNAH17Q9UFH2 4485 aa9.78□□□□□ -0.84
PAF1-201ENST00000221265 SACSQ9NZJ4 4579 aa9.77□□□□□ -0.85
PAF1-201ENST00000221265 DIRC1Q969H9 104 aa9.76□□□□□ -0.85
PAF1-201ENST00000221265 ZNF73O43830 326 aaPredicted RBP9.75□□□□□ -0.85
PAF1-201ENST00000221265 Q6JHZ5 121 aa9.75□□□□□ -0.85
PAF1-201ENST00000221265 IGKV3D-7A0A0C4DH55 119 aa9.75□□□□□ -0.85
PAF1-201ENST00000221265 CNBPP62633 177 aaKnown RBP9.75□□□□□ -0.85
PAF1-201ENST00000221265 Q6ZQY7 126 aa9.75□□□□□ -0.85
PAF1-201ENST00000221265 B5MCH6 92 aa9.74□□□□□ -0.85
PAF1-201ENST00000221265 M0R378 163 aa9.74□□□□□ -0.85
PAF1-201ENST00000221265 TLX1NBP0CAT3 122 aa9.74□□□□□ -0.85
PAF1-201ENST00000221265 COX7BP24311 80 aa9.73□□□□□ -0.85
PAF1-201ENST00000221265 C14orf177Q52M58 125 aa9.73□□□□□ -0.85
PAF1-201ENST00000221265 ELOF1P60002 83 aaKnown RBP9.72□□□□□ -0.85
PAF1-201ENST00000221265 C1orf134Q5TEV5 83 aa9.72□□□□□ -0.85
PAF1-201ENST00000221265 A0A087WTM6 91 aa9.71□□□□□ -0.85
PAF1-201ENST00000221265 FUSP35637 526 aaKnown RBP eCLIP9.71□□□□□ -0.85
PAF1-201ENST00000221265 RBM3P98179 157 aaKnown RBP9.71□□□□□ -0.85
PAF1-201ENST00000221265 TRBV7-6A0A0J9YX20 115 aa9.71□□□□□ -0.86
PAF1-201ENST00000221265 LAMTOR3Q9UHA4 124 aa9.71□□□□□ -0.86
PAF1-201ENST00000221265 FAM168BA1KXE4 195 aa9.7□□□□□ -0.86
PAF1-201ENST00000221265 SERTAD4-AS1Q5TG53 156 aa9.7□□□□□ -0.86
PAF1-201ENST00000221265 Q6ZQT0 140 aa9.7□□□□□ -0.86
PAF1-201ENST00000221265 LOC107984640A0A0U1RRK4 108 aa9.7□□□□□ -0.86
PAF1-201ENST00000221265 HIST1H4AP62805 103 aaKnown RBP9.7□□□□□ -0.86
PAF1-201ENST00000221265 LOC110117498A0A087WWA1 95 aa9.69□□□□□ -0.86
PAF1-201ENST00000221265 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.69□□□□□ -0.86
PAF1-201ENST00000221265 DNAH11Q96DT5 4516 aa9.69□□□□□ -0.86
PAF1-201ENST00000221265 FAT2Q9NYQ8 4349 aa9.69□□□□□ -0.86
PAF1-201ENST00000221265 A0A096LNI7 61 aa9.68□□□□□ -0.86
PAF1-201ENST00000221265 H3BQ85 93 aa9.68□□□□□ -0.86
PAF1-201ENST00000221265 KRTAP7-1Q8IUC3 87 aa9.68□□□□□ -0.86
PAF1-201ENST00000221265 IGKV2-24A0A0C4DH68 120 aa9.67□□□□□ -0.86
PAF1-201ENST00000221265 LINC00528Q8N1L1 170 aa9.66□□□□□ -0.86
PAF1-201ENST00000221265 C9orf163Q8N9P6 203 aa9.66□□□□□ -0.86
PAF1-201ENST00000221265 SS18L2Q9UHA2 77 aa9.66□□□□□ -0.86
PAF1-201ENST00000221265 A0A087WVE0 104 aa9.65□□□□□ -0.86
PAF1-201ENST00000221265 CHTF8P0CG12 524 aa9.65□□□□□ -0.87
PAF1-201ENST00000221265 TNP2Q05952 138 aa9.65□□□□□ -0.87
PAF1-201ENST00000221265 RTL8CO15255 209 aa9.64□□□□□ -0.87
PAF1-201ENST00000221265 DSCR8Q96T75 97 aa9.64□□□□□ -0.87
PAF1-201ENST00000221265 C16orf90A8MZG2 172 aa9.63□□□□□ -0.87
PAF1-201ENST00000221265 FAM19A5Q7Z5A7 132 aaPredicted RBP9.63□□□□□ -0.87
PAF1-201ENST00000221265 PKD1P98161 4303 aa9.63□□□□□ -0.87
PAF1-201ENST00000221265 DNAH5Q8TE73 4624 aa9.63□□□□□ -0.87
PAF1-201ENST00000221265 KMT2CQ8NEZ4 4911 aaKnown RBP9.63□□□□□ -0.87
PAF1-201ENST00000221265 UBL5Q9BZL1 73 aa9.63□□□□□ -0.87
PAF1-201ENST00000221265 ATP5EP2Q5VTU8 51 aa9.62□□□□□ -0.87
PAF1-201ENST00000221265 C3orf22Q8N5N4 141 aa9.62□□□□□ -0.87
PAF1-201ENST00000221265 C7orf33Q8WU49 177 aa9.62□□□□□ -0.87
PAF1-201ENST00000221265 PLA2G2DQ9UNK4 145 aa9.62□□□□□ -0.87
PAF1-201ENST00000221265 ATOX1O00244 68 aa9.62□□□□□ -0.87
PAF1-201ENST00000221265 NKAPP1Q8N9T2 125 aa9.62□□□□□ -0.87
PAF1-201ENST00000221265 KCNQ1DNQ9H478 68 aa9.62□□□□□ -0.87
PAF1-201ENST00000221265 PANO1I0J062 215 aa9.61□□□□□ -0.87
PAF1-201ENST00000221265 GHRHP01286 108 aa9.61□□□□□ -0.87
PAF1-201ENST00000221265 PDE6GP18545 87 aa9.61□□□□□ -0.87
PAF1-201ENST00000221265 A0A1W2PNN7 141 aa9.6□□□□□ -0.87
PAF1-201ENST00000221265 TRBV7-4A0A0J9YYF1 115 aa9.6□□□□□ -0.87
PAF1-201ENST00000221265 UQCRQO14949 82 aa9.59□□□□□ -0.87
PAF1-201ENST00000221265 IGLV5-37A0A075B6J1 123 aa9.59□□□□□ -0.87
PAF1-201ENST00000221265 RPL37AP8A6NKH3 93 aa9.59□□□□□ -0.87
PAF1-201ENST00000221265 COX7CP15954 63 aa9.59□□□□□ -0.87
PAF1-201ENST00000221265 FAM19A1Q7Z5A9 133 aa9.59□□□□□ -0.87
PAF1-201ENST00000221265 LCE6AA0A183 80 aa9.57□□□□□ -0.88
PAF1-201ENST00000221265 RYR2Q92736 4967 aa9.56□□□□□ -0.88
PAF1-201ENST00000221265 C9orf153Q5TBE3 101 aa9.56□□□□□ -0.88
PAF1-201ENST00000221265 Q6ZVQ6 151 aa9.56□□□□□ -0.88
PAF1-201ENST00000221265 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.56□□□□□ -0.88
PAF1-201ENST00000221265 KRTAP10-2P60368 255 aa9.55□□□□□ -0.88
PAF1-201ENST00000221265 MRPL55Q7Z7F7 128 aaKnown RBP9.55□□□□□ -0.88
PAF1-201ENST00000221265 DNAH8Q96JB1 4490 aa9.55□□□□□ -0.88
PAF1-201ENST00000221265 IGLV5-52A0A0A0MRZ9 124 aa9.55□□□□□ -0.88
PAF1-201ENST00000221265 IGLV1-50A0A075B6I6 118 aa9.54□□□□□ -0.88
PAF1-201ENST00000221265 LINC01547P58512 204 aaPredicted RBP9.54□□□□□ -0.88
PAF1-201ENST00000221265 PKHD1P08F94 4074 aa9.53□□□□□ -0.88
PAF1-201ENST00000221265 KRTAP4-16G5E9R7 235 aaPredicted RBP9.52□□□□□ -0.88
PAF1-201ENST00000221265 HAMPP81172 84 aa9.52□□□□□ -0.89
PAF1-201ENST00000221265 SERP2Q8N6R1 65 aa9.52□□□□□ -0.89
PAF1-201ENST00000221265 PRYO14603 147 aa9.51□□□□□ -0.89
PAF1-201ENST00000221265 SPRR1AP35321 89 aa9.51□□□□□ -0.89
PAF1-201ENST00000221265 PHF5AQ7RTV0 110 aaKnown RBP9.51□□□□□ -0.89
PAF1-201ENST00000221265 Q8N377 158 aa9.51□□□□□ -0.89
PAF1-201ENST00000221265 SPACA4Q8TDM5 124 aa9.51□□□□□ -0.89
PAF1-201ENST00000221265 Q6ZRX8 168 aa9.51□□□□□ -0.89
PAF1-201ENST00000221265 DEFB105AQ8NG35 78 aa9.51□□□□□ -0.89
PAF1-201ENST00000221265 DPH3Q96FX2 82 aa9.51□□□□□ -0.89
PAF1-201ENST00000221265 SRRM2Q9UQ35 2752 aaKnown RBP9.5□□□□□ -0.89
PAF1-201ENST00000221265 CRYGAP11844 174 aa9.5□□□□□ -0.89
PAF1-201ENST00000221265 KRTAP11-1Q8IUC1 163 aa9.5□□□□□ -0.89
PAF1-201ENST00000221265 Q9BRP9 147 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms