RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 A8MWP4 228 aa8.98□□□□□ -0.97
TGFBR3-201ENST00000212355 ACANP16112 2415 aa8.98□□□□□ -0.97
TGFBR3-201ENST00000212355 FAM229AH3BQW9 127 aa8.98□□□□□ -0.97
TGFBR3-201ENST00000212355 LINC01600Q96MT4 127 aa8.97□□□□□ -0.97
TGFBR3-201ENST00000212355 LAMA3Q16787 3333 aa8.96□□□□□ -0.97
TGFBR3-201ENST00000212355 H3BNG1 76 aa8.96□□□□□ -0.97
TGFBR3-201ENST00000212355 MTORP42345 2549 aa8.96□□□□□ -0.98
TGFBR3-201ENST00000212355 LAMA2P24043 3122 aaKnown RBP8.95□□□□□ -0.98
TGFBR3-201ENST00000212355 Q8N377 158 aa8.95□□□□□ -0.98
TGFBR3-201ENST00000212355 MRPL34Q9BQ48 92 aaKnown RBP8.95□□□□□ -0.98
TGFBR3-201ENST00000212355 GIG44P09565 113 aaPredicted RBP8.94□□□□□ -0.98
TGFBR3-201ENST00000212355 K7EIL1 84 aa8.93□□□□□ -0.98
TGFBR3-201ENST00000212355 DNAH14Q0VDD8 3507 aa8.93□□□□□ -0.98
TGFBR3-201ENST00000212355 FASNP49327 2511 aaKnown RBP8.92□□□□□ -0.98
TGFBR3-201ENST00000212355 C8orf87E5RJ46 101 aa8.92□□□□□ -0.98
TGFBR3-201ENST00000212355 ERC2-IT1O76042 136 aa8.92□□□□□ -0.98
TGFBR3-201ENST00000212355 RPS28P62857 69 aaKnown RBP8.91□□□□□ -0.98
TGFBR3-201ENST00000212355 LINC00528Q8N1L1 170 aa8.91□□□□□ -0.98
TGFBR3-201ENST00000212355 CELSR3Q9NYQ7 3312 aa8.9□□□□□ -0.98
TGFBR3-201ENST00000212355 KCNQ1DNQ9H478 68 aa8.89□□□□□ -0.99
TGFBR3-201ENST00000212355 UNC80Q8N2C7 3258 aa8.89□□□□□ -0.99
TGFBR3-201ENST00000212355 A0A0D9SG42 100 aa8.88□□□□□ -0.99
TGFBR3-201ENST00000212355 PRR15Q8IV56 129 aa8.88□□□□□ -0.99
TGFBR3-201ENST00000212355 C8orf17Q9NRJ1 99 aa8.87□□□□□ -0.99
TGFBR3-201ENST00000212355 CHD7Q9P2D1 2997 aa8.87□□□□□ -0.99
TGFBR3-201ENST00000212355 J3QL48 77 aa8.87□□□□□ -0.99
TGFBR3-201ENST00000212355 LINC01554Q52M75 96 aa8.86□□□□□ -0.99
TGFBR3-201ENST00000212355 CDH23Q9H251 3354 aa8.86□□□□□ -0.99
TGFBR3-201ENST00000212355 Q8N1X5 172 aa8.86□□□□□ -0.99
TGFBR3-201ENST00000212355 LINC00336Q6ZUF6 198 aa8.86□□□□□ -0.99
TGFBR3-201ENST00000212355 LOC101927531A0A1B0GV80 90 aa8.84□□□□□ -0.99
TGFBR3-201ENST00000212355 H3BPC8 53 aa8.84□□□□□ -1
TGFBR3-201ENST00000212355 F8P00451 2351 aa8.83□□□□□ -1
TGFBR3-201ENST00000212355 COX6B2Q6YFQ2 88 aa8.83□□□□□ -1
TGFBR3-201ENST00000212355 C19orf73Q9NVV2 129 aa8.83□□□□□ -1
TGFBR3-201ENST00000212355 MIR22HGQ0VDD5 57 aa8.81□□□□□ -1
TGFBR3-201ENST00000212355 PRUNE2Q8WUY3 3088 aa8.81□□□□□ -1
TGFBR3-201ENST00000212355 SZT2Q5T011 3432 aa8.81□□□□□ -1
TGFBR3-201ENST00000212355 A0A1B0GVX0 72 aa8.81□□□□□ -1
TGFBR3-201ENST00000212355 LINC00304Q8N9R0 145 aa8.8□□□□□ -1
TGFBR3-201ENST00000212355 H7BZZ5 65 aa8.8□□□□□ -1
TGFBR3-201ENST00000212355 WWC2-AS2Q96NR7 200 aa8.8□□□□□ -1
TGFBR3-201ENST00000212355 PRR34Q9NV39 138 aa8.79□□□□□ -1
TGFBR3-201ENST00000212355 TRIOO75962 3097 aa8.79□□□□□ -1
TGFBR3-201ENST00000212355 A0A1B0GW54 56 aa8.79□□□□□ -1
TGFBR3-201ENST00000212355 A0A087WTM6 91 aa8.78□□□□□ -1
TGFBR3-201ENST00000212355 FREM2Q5SZK8 3169 aa8.78□□□□□ -1
TGFBR3-201ENST00000212355 PSORS1C2Q9UIG4 136 aa8.78□□□□□ -1
TGFBR3-201ENST00000212355 ZNF861PO60384 105 aa8.78□□□□□ -1
TGFBR3-201ENST00000212355 RANBP2P49792 3224 aaKnown RBP8.78□□□□□ -1
TGFBR3-201ENST00000212355 A0A096LNT2 108 aa8.77□□□□□ -1.01
TGFBR3-201ENST00000212355 UQCR11O14957 56 aa8.76□□□□□ -1.01
TGFBR3-201ENST00000212355 A0A1W2PNM2 257 aa8.76□□□□□ -1.01
TGFBR3-201ENST00000212355 KLK9Q2XQG4 91 aa8.75□□□□□ -1.01
TGFBR3-201ENST00000212355 IGLV5-48A0A075B6I7 105 aa8.74□□□□□ -1.01
TGFBR3-201ENST00000212355 HTTP42858 3142 aa8.74□□□□□ -1.01
TGFBR3-201ENST00000212355 CR1P17927 2039 aa8.72□□□□□ -1.01
TGFBR3-201ENST00000212355 KLKP1Q107X0 134 aa8.71□□□□□ -1.02
TGFBR3-201ENST00000212355 IGLV5-37A0A075B6J1 123 aa8.7□□□□□ -1.02
TGFBR3-201ENST00000212355 IGLV7-43P04211 117 aa8.7□□□□□ -1.02
TGFBR3-201ENST00000212355 ZNF575Q86XF7 245 aa8.7□□□□□ -1.02
TGFBR3-201ENST00000212355 USP24Q9UPU5 2620 aa8.69□□□□□ -1.02
TGFBR3-201ENST00000212355 CRIPTQ9P021 101 aa8.68□□□□□ -1.02
TGFBR3-201ENST00000212355 KRTAP1-3Q8IUG1 177 aa8.67□□□□□ -1.02
TGFBR3-201ENST00000212355 SPRR4Q96PI1 79 aa8.66□□□□□ -1.02
TGFBR3-201ENST00000212355 C9orf163Q8N9P6 203 aa8.66□□□□□ -1.02
TGFBR3-201ENST00000212355 HECTD1Q9ULT8 2610 aa8.65□□□□□ -1.02
TGFBR3-201ENST00000212355 PRR26Q8N8Z3 221 aa8.65□□□□□ -1.02
TGFBR3-201ENST00000212355 CYP4F30PQ9H0H9 118 aa8.65□□□□□ -1.02
TGFBR3-201ENST00000212355 VPS13AQ96RL7 3174 aa8.65□□□□□ -1.03
TGFBR3-201ENST00000212355 LINC00612Q8N6U2 182 aa8.64□□□□□ -1.03
TGFBR3-201ENST00000212355 FAM229BQ4G0N7 80 aa8.63□□□□□ -1.03
TGFBR3-201ENST00000212355 TLX1NBP0CAT3 122 aa8.61□□□□□ -1.03
TGFBR3-201ENST00000212355 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.61□□□□□ -1.03
TGFBR3-201ENST00000212355 TNP2Q05952 138 aa8.61□□□□□ -1.03
TGFBR3-201ENST00000212355 FAM104AQ969W3 186 aa8.6□□□□□ -1.03
TGFBR3-201ENST00000212355 EPG5Q9HCE0 2579 aa8.6□□□□□ -1.03
TGFBR3-201ENST00000212355 KRTAP1-1Q07627 177 aa8.59□□□□□ -1.03
TGFBR3-201ENST00000212355 FLNBO75369 2602 aaKnown RBP8.59□□□□□ -1.03
TGFBR3-201ENST00000212355 Q8NDZ9 215 aa8.59□□□□□ -1.03
TGFBR3-201ENST00000212355 WDFY4Q6ZS81 3184 aa8.59□□□□□ -1.03
TGFBR3-201ENST00000212355 CYSTM1Q9H1C7 97 aa8.59□□□□□ -1.04
TGFBR3-201ENST00000212355 PLA2G2DQ9UNK4 145 aa8.59□□□□□ -1.04
TGFBR3-201ENST00000212355 KTN1-AS1Q86SY8 53 aa8.58□□□□□ -1.04
TGFBR3-201ENST00000212355 VCANP13611 3396 aa8.57□□□□□ -1.04
TGFBR3-201ENST00000212355 MGAM2Q2M2H8 2515 aa8.55□□□□□ -1.04
TGFBR3-201ENST00000212355 MGAQ8IWI9 3026 aa8.53□□□□□ -1.04
TGFBR3-201ENST00000212355 OCR1Q9BZK8 76 aa8.52□□□□□ -1.05
TGFBR3-201ENST00000212355 CNBPP62633 177 aaKnown RBP8.51□□□□□ -1.05
TGFBR3-201ENST00000212355 CDC42SE1Q9NRR8 79 aa8.51□□□□□ -1.05
TGFBR3-201ENST00000212355 RBM12B-AS1Q9P1G2 102 aa8.5□□□□□ -1.05
TGFBR3-201ENST00000212355 CD164Q04900 197 aa8.48□□□□□ -1.05
TGFBR3-201ENST00000212355 COL6A3P12111 3177 aa8.48□□□□□ -1.05
TGFBR3-201ENST00000212355 LCA10Q71F78 164 aa8.48□□□□□ -1.05
TGFBR3-201ENST00000212355 PRAC1Q96KF2 57 aa8.48□□□□□ -1.05
TGFBR3-201ENST00000212355 CHD9Q3L8U1 2897 aa8.47□□□□□ -1.05
TGFBR3-201ENST00000212355 HRES1P13985 223 aa8.47□□□□□ -1.05
TGFBR3-201ENST00000212355 Q8N9P0 234 aaPredicted RBP8.46□□□□□ -1.05
TGFBR3-201ENST00000212355 WIPF1O43516 503 aa8.46□□□□□ -1.06
TGFBR3-201ENST00000212355 REV3LO60673 3130 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms