RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 BPY2O14599 106 aa13.29□□□□□ -0.28
RCN1-201ENST00000054950 IGKV2D-24A0A075B6R9 120 aa13.28□□□□□ -0.28
RCN1-201ENST00000054950 SERTAD4-AS1Q5TG53 156 aa13.27□□□□□ -0.28
RCN1-201ENST00000054950 OXLD1Q5BKU9 147 aa13.27□□□□□ -0.29
RCN1-201ENST00000054950 NREPQ16612 68 aa13.26□□□□□ -0.29
RCN1-201ENST00000054950 C1orf43Q9BWL3 253 aa13.26□□□□□ -0.29
RCN1-201ENST00000054950 KMT2BQ9UMN6 2715 aaPredicted RBP13.25□□□□□ -0.29
RCN1-201ENST00000054950 IGKV4-1P06312 121 aa13.24□□□□□ -0.29
RCN1-201ENST00000054950 SERP1Q9Y6X1 66 aa13.23□□□□□ -0.29
RCN1-201ENST00000054950 SYCNQ0VAF6 134 aa13.22□□□□□ -0.29
RCN1-201ENST00000054950 C7orf33Q8WU49 177 aa13.22□□□□□ -0.29
RCN1-201ENST00000054950 RPL37AP8A6NKH3 93 aa13.21□□□□□ -0.29
RCN1-201ENST00000054950 Q8N377 158 aa13.21□□□□□ -0.29
RCN1-201ENST00000054950 NKAPP1Q8N9T2 125 aa13.21□□□□□ -0.3
RCN1-201ENST00000054950 EPM2AB3EWF7 344 aa13.2□□□□□ -0.3
RCN1-201ENST00000054950 KRTAP10-11P60412 298 aa13.2□□□□□ -0.3
RCN1-201ENST00000054950 FAM168BA1KXE4 195 aa13.19□□□□□ -0.3
RCN1-201ENST00000054950 TMEM254Q8TBM7 123 aa13.18□□□□□ -0.3
RCN1-201ENST00000054950 H3BNG1 76 aa13.16□□□□□ -0.3
RCN1-201ENST00000054950 KCNQ1DNQ9H478 68 aa13.16□□□□□ -0.3
RCN1-201ENST00000054950 CASC10Q5T4H9 136 aa13.14□□□□□ -0.31
RCN1-201ENST00000054950 ST20-AS1Q8NBB2 130 aa13.14□□□□□ -0.31
RCN1-201ENST00000054950 LINC01556Q5JQF7 62 aa13.14□□□□□ -0.31
RCN1-201ENST00000054950 Q9BRP9 147 aa13.14□□□□□ -0.31
RCN1-201ENST00000054950 FLNBO75369 2602 aaKnown RBP13.13□□□□□ -0.31
RCN1-201ENST00000054950 WIPF1O43516 503 aa13.13□□□□□ -0.31
RCN1-201ENST00000054950 FP248Q71RG6 208 aaPredicted RBP13.13□□□□□ -0.31
RCN1-201ENST00000054950 LINC00474Q9P2X8 69 aa13.13□□□□□ -0.31
RCN1-201ENST00000054950 DEFB131BA0A096LNP1 70 aa13.12□□□□□ -0.31
RCN1-201ENST00000054950 OCR1Q9BZK8 76 aa13.12□□□□□ -0.31
RCN1-201ENST00000054950 CMYA5Q8N3K9 4069 aa13.12□□□□□ -0.31
RCN1-201ENST00000054950 F8P00451 2351 aa13.11□□□□□ -0.31
RCN1-201ENST00000054950 A0A1W2PNM2 257 aa13.1□□□□□ -0.31
RCN1-201ENST00000054950 BAHCC1Q9P281 2608 aa13.1□□□□□ -0.31
RCN1-201ENST00000054950 IGLV5-48A0A075B6I7 105 aa13.09□□□□□ -0.31
RCN1-201ENST00000054950 Q6ZRX8 168 aa13.08□□□□□ -0.32
RCN1-201ENST00000054950 KRTAP7-1Q8IUC3 87 aa13.08□□□□□ -0.32
RCN1-201ENST00000054950 HIGD2AQ9BW72 106 aa13.08□□□□□ -0.32
RCN1-201ENST00000054950 NDUFC1O43677 76 aa13.07□□□□□ -0.32
RCN1-201ENST00000054950 SMIM29Q86T20 159 aa13.07□□□□□ -0.32
RCN1-201ENST00000054950 FAM30AQ9NZY2 134 aa13.07□□□□□ -0.32
RCN1-201ENST00000054950 DNAH1Q9P2D7 4330 aa13.06□□□□□ -0.32
RCN1-201ENST00000054950 ERC2-IT1O76042 136 aa13.06□□□□□ -0.32
RCN1-201ENST00000054950 C11orf45Q8TAV5 145 aa13.06□□□□□ -0.32
RCN1-201ENST00000054950 STAB1Q9NY15 2570 aa13.06□□□□□ -0.32
RCN1-201ENST00000054950 KRTAP4-16G5E9R7 235 aaPredicted RBP13.05□□□□□ -0.32
RCN1-201ENST00000054950 FAM229BQ4G0N7 80 aa13.05□□□□□ -0.32
RCN1-201ENST00000054950 MAST4O15021 2626 aa13.05□□□□□ -0.32
RCN1-201ENST00000054950 A0A0U1RQV1 116 aa13.05□□□□□ -0.32
RCN1-201ENST00000054950 C1orf137Q5JT78 98 aa13.05□□□□□ -0.32
RCN1-201ENST00000054950 PRYO14603 147 aa13.04□□□□□ -0.32
RCN1-201ENST00000054950 LINC00336Q6ZUF6 198 aa13.04□□□□□ -0.32
RCN1-201ENST00000054950 ETDCA0A1B0GVM5 59 aa13.04□□□□□ -0.32
RCN1-201ENST00000054950 IGLV1-50A0A075B6I6 118 aa13.03□□□□□ -0.32
RCN1-201ENST00000054950 SMIM26A0A096LP01 95 aa13.03□□□□□ -0.32
RCN1-201ENST00000054950 A0A0G2JQZ4 141 aa13.03□□□□□ -0.32
RCN1-201ENST00000054950 A0A1W2PNN7 141 aa13.03□□□□□ -0.32
RCN1-201ENST00000054950 FUSP35637 526 aaKnown RBP eCLIP13.03□□□□□ -0.32
RCN1-201ENST00000054950 NOTCH1P46531 2555 aa13.03□□□□□ -0.32
RCN1-201ENST00000054950 DHRS4-AS1Q9P1J3 65 aa13.02□□□□□ -0.33
RCN1-201ENST00000054950 TNP2Q05952 138 aa13.01□□□□□ -0.33
RCN1-201ENST00000054950 DNAH10OSP0CZ25 163 aa13.01□□□□□ -0.33
RCN1-201ENST00000054950 FBN1P35555 2871 aaKnown RBP13.01□□□□□ -0.33
RCN1-201ENST00000054950 F8WDY8 70 aa12.99□□□□□ -0.33
RCN1-201ENST00000054950 DNAH10Q8IVF4 4471 aa12.98□□□□□ -0.33
RCN1-201ENST00000054950 TLX1NBP0CAT3 122 aa12.98□□□□□ -0.33
RCN1-201ENST00000054950 LINC00588Q9Y4M8 146 aa12.98□□□□□ -0.33
RCN1-201ENST00000054950 SPRR1AP35321 89 aa12.97□□□□□ -0.33
RCN1-201ENST00000054950 UBE2BP63146 152 aa12.97□□□□□ -0.33
RCN1-201ENST00000054950 Q8NBF4 154 aa12.97□□□□□ -0.33
RCN1-201ENST00000054950 MRAPQ8TCY5 172 aa12.97□□□□□ -0.33
RCN1-201ENST00000054950 K7EQZ3 153 aa12.95□□□□□ -0.34
RCN1-201ENST00000054950 ATP5EP56381 51 aaPredicted RBP12.95□□□□□ -0.34
RCN1-201ENST00000054950 LYSTQ99698 3801 aa12.95□□□□□ -0.34
RCN1-201ENST00000054950 PLA2G2DQ9UNK4 145 aa12.95□□□□□ -0.34
RCN1-201ENST00000054950 DSCR10P59022 87 aa12.95□□□□□ -0.34
RCN1-201ENST00000054950 MPLKIPQ8TAP9 179 aa12.95□□□□□ -0.34
RCN1-201ENST00000054950 MRPL55Q7Z7F7 128 aaKnown RBP12.94□□□□□ -0.34
RCN1-201ENST00000054950 PRB2P02812 416 aaPredicted RBP12.93□□□□□ -0.34
RCN1-201ENST00000054950 IGLV5-37A0A075B6J1 123 aa12.92□□□□□ -0.34
RCN1-201ENST00000054950 DNAH3Q8TD57 4116 aa12.92□□□□□ -0.34
RCN1-201ENST00000054950 DEFB116Q30KQ4 102 aa12.91□□□□□ -0.34
RCN1-201ENST00000054950 SPRR4Q96PI1 79 aa12.9□□□□□ -0.34
RCN1-201ENST00000054950 LINC00476Q8WZB0 136 aa12.88□□□□□ -0.35
RCN1-201ENST00000054950 CSMD3Q7Z407 3707 aa12.87□□□□□ -0.35
RCN1-201ENST00000054950 PRLHP81277 87 aa12.86□□□□□ -0.35
RCN1-201ENST00000054950 REG3GQ6UW15 175 aa12.86□□□□□ -0.35
RCN1-201ENST00000054950 SRRM2Q9UQ35 2752 aaKnown RBP12.86□□□□□ -0.35
RCN1-201ENST00000054950 HUWE1Q7Z6Z7 4374 aaKnown RBP12.85□□□□□ -0.35
RCN1-201ENST00000054950 COL6A5A8TX70 2615 aa12.85□□□□□ -0.35
RCN1-201ENST00000054950 LRCOL1A6NCL2 159 aa12.84□□□□□ -0.35
RCN1-201ENST00000054950 NBEAL1Q6ZS30 2694 aa12.84□□□□□ -0.35
RCN1-201ENST00000054950 IGKV2-24A0A0C4DH68 120 aa12.83□□□□□ -0.35
RCN1-201ENST00000054950 PRO0628Q9UI54 55 aa12.83□□□□□ -0.35
RCN1-201ENST00000054950 KRTAP24-1Q3LI83 254 aa12.83□□□□□ -0.36
RCN1-201ENST00000054950 A0A1B0GW54 56 aa12.82□□□□□ -0.36
RCN1-201ENST00000054950 IGFL1Q6UW32 110 aa12.82□□□□□ -0.36
RCN1-201ENST00000054950 DNAH9Q9NYC9 4486 aa12.81□□□□□ -0.36
RCN1-201ENST00000054950 LCE6AA0A183 80 aa12.81□□□□□ -0.36
RCN1-201ENST00000054950 PSCAO43653 123 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms