RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Gm45871A0A1B0GRI9 540 aa3.8□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Gm20219A0A1B0GRQ3 87 aa3.8□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Wisp3D3Z5L9 354 aa3.8□□□□□ -1.8
Prkdc-201ENSMUST00000023352 H2-DMb1P35737 261 aa3.8□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Slurp1Q9Z0K7 110 aa3.8□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Flg2Q2VIS4 2362 aa3.8□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Tcf20Q9EPQ8 1987 aa3.8□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Rpl32-psP17932 135 aa3.8□□□□□ -1.8
Prkdc-201ENSMUST00000023352 CrygcQ61597 174 aa3.8□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Tmem160Q9D938 188 aa3.8□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Cbln3Q9JHG0 197 aa3.8□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Gm28539A0A087WSL9 92 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Gm36368A0A1D5RLK8 91 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Frrs1lB1AXV0 293 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Hbb-b2P02089 147 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Cysltr1Q99JA4 352 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Prss22Q9ER10 306 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 IcosQ9WVS0 200 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Myf5P24699 255 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Taf15Q8BQ46 557 aaKnown RBP3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Klf13Q9JJZ6 289 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Ighv4-1A0A075B5R5 116 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Pax1P09084 446 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Pax9P47242 342 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Tmem256Q5F285 113 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Olfr1373Q7TQT6 311 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Ms4a12A0A087WSB9 263 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Defa27F2Z403 93 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 GlrxQ9QUH0 107 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Ighv1-22A0A075B5U7 117 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Trav6d-3A0A075B6B3 112 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 CtsbP10605 339 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Trav6-3Q5R1E6 112 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 H2-M10.4Q85ZW8 331 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Fam110aQ8R184 296 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Trav14n-3A0A075B645 120 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Eid2bE9Q2Y0 151 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Mbd6Q3TY92 1003 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Dmrtc1c1Q9D410 238 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Ovol1Q9WTJ2 267 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Kmt2bO08550 2713 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Igkv13-85A0A075B666 115 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Ighv1-20A0A0A6YX66 117 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Igkv14-100A0A0G2JG36 117 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Gm45521A0A1B0GRK0 198 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 E030025P04RikA2A6V5 185 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Saa3P04918 122 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Alkbh6Q8K2U2 238 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 St6galnac6Q9JM95 333 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Trbv31A0A075B5J5 111 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Trav6n-6A0A075B6B2 114 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 TcraP01849 138 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Tmem95P0DJF3 176 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Id3P41133 119 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Clpsl2Q3UW21 102 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Gm10750Q3V0I0 133 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Fam168aQ8BGZ2 244 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 PerpQ9JK95 193 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Trav4n-4A0A075B615 110 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Prr19B2RW88 366 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Rbx1P62878 108 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Klk1b21Q61759 261 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Negr1Q80Z24 348 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Supt4h1bQ9Z199 117 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Hes3Q61657 175 aa3.79□□□□□ -1.8
Prkdc-201ENSMUST00000023352 P01655 112 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Zfp36l2P23949 484 aaKnown RBP3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Rpl36aP83882 106 aaKnown RBP3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Wdr83osQ6ZWX0 106 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Il1f10Q8R459 152 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Col9a1Q05722 921 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Gm11232Q5SPI8 295 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Tmem258P61166 79 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 AdmP97297 184 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Tomm40Q9QYA2 361 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Igkv4-91A0A075B5L2 119 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Csrp1P97315 193 aaKnown RBP3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 GchfrP99025 84 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 QrfpQ8CE23 124 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Cldn23Q9D7D7 296 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Ntn3Q9R1A3 580 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Ighv14-1A0A075B5R4 117 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Hamp2Q80T19 83 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Iba57Q8CAK1 358 aaKnown RBP3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Prr30Q9D9B7 401 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Igkv14-126A0A075B5K0 117 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Ighv6-3A0A075B5T2 118 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Igkv1-131A0A140T8M8 120 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 P01812 117 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Iglc2P01844 104 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Sox16Q62247 57 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Zfp119aQ9JIC0 545 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Higd1aQ9JLR9 95 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Gm28269A0A087WSG3 125 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Gm45623A0A1B0GSF6 103 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Foxh1O88621 401 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Tcl1b1P56840 116 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 YrdcQ3U5F4 280 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Vwc2lQ505H4 222 aa3.78□□□□□ -1.8
Prkdc-201ENSMUST00000023352 Zg16Q8K0C5 167 aa3.78□□□□□ -1.8
Retrieved 100 of 22,080 RNA–protein pairs in 117.8 ms