RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 TRRAPQ9Y4A5 3859 aa9.43□□□□□ -0.9
PHGDH-233ENST00000642021 C10orf25Q5T742 122 aa9.42□□□□□ -0.9
PHGDH-233ENST00000642021 C6orf223Q8N319 242 aa9.42□□□□□ -0.9
PHGDH-233ENST00000642021 NDUFC2O95298 119 aa9.41□□□□□ -0.9
PHGDH-233ENST00000642021 IGHV4-28A0A0C4DH34 117 aa9.41□□□□□ -0.9
PHGDH-233ENST00000642021 A0A0U1RQV1 116 aa9.41□□□□□ -0.9
PHGDH-233ENST00000642021 LYRM9A8MSI8 78 aa9.41□□□□□ -0.9
PHGDH-233ENST00000642021 CELA1Q9UNI1 258 aa9.41□□□□□ -0.9
PHGDH-233ENST00000642021 COX17Q14061 63 aa9.41□□□□□ -0.9
PHGDH-233ENST00000642021 C6orf99Q4VX62 202 aa9.41□□□□□ -0.9
PHGDH-233ENST00000642021 Q6JHZ5 121 aa9.41□□□□□ -0.9
PHGDH-233ENST00000642021 CCKP06307 115 aa9.4□□□□□ -0.9
PHGDH-233ENST00000642021 UNQ6190/PRO20217Q6UXQ8 127 aa9.4□□□□□ -0.91
PHGDH-233ENST00000642021 NOTCH2Q04721 2471 aa9.39□□□□□ -0.91
PHGDH-233ENST00000642021 DAD1P61803 113 aa9.38□□□□□ -0.91
PHGDH-233ENST00000642021 OTOGQ6ZRI0 2925 aa9.37□□□□□ -0.91
PHGDH-233ENST00000642021 RPL18AQ02543 176 aaKnown RBP9.37□□□□□ -0.91
PHGDH-233ENST00000642021 TMEM256-PLSCR3K7ERE1 68 aa9.37□□□□□ -0.91
PHGDH-233ENST00000642021 ATOX1O00244 68 aa9.37□□□□□ -0.91
PHGDH-233ENST00000642021 JMJD7-PLA2G4BH0Y9G9 81 aa9.36□□□□□ -0.91
PHGDH-233ENST00000642021 HTN3P15516 51 aa9.36□□□□□ -0.91
PHGDH-233ENST00000642021 S100A7L2Q5SY68 101 aa9.35□□□□□ -0.91
PHGDH-233ENST00000642021 WFDC9Q8NEX5 89 aa9.35□□□□□ -0.91
PHGDH-233ENST00000642021 CYSRT1A8MQ03 144 aa9.35□□□□□ -0.91
PHGDH-233ENST00000642021 SPAG11BQ08648 103 aa9.35□□□□□ -0.91
PHGDH-233ENST00000642021 LINC00575Q6W349 94 aa9.35□□□□□ -0.91
PHGDH-233ENST00000642021 Q8NAQ8 132 aa9.35□□□□□ -0.91
PHGDH-233ENST00000642021 C9orf66Q5T8R8 295 aa9.34□□□□□ -0.91
PHGDH-233ENST00000642021 KLK12Q9UKR0 248 aa9.34□□□□□ -0.91
PHGDH-233ENST00000642021 HIVEP1P15822 2718 aa9.33□□□□□ -0.92
PHGDH-233ENST00000642021 USP17L23D6RBM5 183 aa9.33□□□□□ -0.92
PHGDH-233ENST00000642021 HECTD1Q9ULT8 2610 aa9.33□□□□□ -0.92
PHGDH-233ENST00000642021 RETNQ9HD89 108 aa9.32□□□□□ -0.92
PHGDH-233ENST00000642021 ATRQ13535 2644 aa9.32□□□□□ -0.92
PHGDH-233ENST00000642021 ENHOQ6UWT2 76 aa9.32□□□□□ -0.92
PHGDH-233ENST00000642021 A0A0J9YWU9 116 aa9.31□□□□□ -0.92
PHGDH-233ENST00000642021 IGHV4-30-4P0DP06 118 aa9.31□□□□□ -0.92
PHGDH-233ENST00000642021 APOC4P55056 127 aa9.31□□□□□ -0.92
PHGDH-233ENST00000642021 LELP1Q5T871 98 aa9.31□□□□□ -0.92
PHGDH-233ENST00000642021 M0R2N4 97 aa9.3□□□□□ -0.92
PHGDH-233ENST00000642021 FAM19A1Q7Z5A9 133 aa9.3□□□□□ -0.92
PHGDH-233ENST00000642021 PRR34Q9NV39 138 aa9.3□□□□□ -0.92
PHGDH-233ENST00000642021 BRK1Q8WUW1 75 aa9.3□□□□□ -0.92
PHGDH-233ENST00000642021 IGLV6-57P01721 117 aa9.29□□□□□ -0.92
PHGDH-233ENST00000642021 SERP2Q8N6R1 65 aa9.29□□□□□ -0.92
PHGDH-233ENST00000642021 XAGE1AQ9HD64 81 aa9.29□□□□□ -0.92
PHGDH-233ENST00000642021 SPART-AS1P0CW21 52 aa9.29□□□□□ -0.92
PHGDH-233ENST00000642021 LYPD5Q6UWN5 251 aa9.29□□□□□ -0.92
PHGDH-233ENST00000642021 UPK3BQ9BT76 320 aa9.29□□□□□ -0.92
PHGDH-233ENST00000642021 MIFP14174 115 aa9.28□□□□□ -0.92
PHGDH-233ENST00000642021 C6orf48Q9UBA6 75 aa9.28□□□□□ -0.92
PHGDH-233ENST00000642021 NSD1Q96L73 2696 aaPredicted RBP9.28□□□□□ -0.92
PHGDH-233ENST00000642021 Q6ZQT0 140 aa9.28□□□□□ -0.92
PHGDH-233ENST00000642021 INAFM1C9JVW0 142 aa9.27□□□□□ -0.93
PHGDH-233ENST00000642021 RBM3P98179 157 aaKnown RBP9.27□□□□□ -0.93
PHGDH-233ENST00000642021 TRBV10-3A0A0K0K1G6 114 aa9.27□□□□□ -0.93
PHGDH-233ENST00000642021 Q6ZQY7 126 aa9.27□□□□□ -0.93
PHGDH-233ENST00000642021 LAMTOR3Q9UHA4 124 aa9.26□□□□□ -0.93
PHGDH-233ENST00000642021 TRAV23DV6A0A075B6W5 121 aa9.26□□□□□ -0.93
PHGDH-233ENST00000642021 J3QKU1 62 aa9.26□□□□□ -0.93
PHGDH-233ENST00000642021 ZNF561-AS1K7EIQ3 104 aa9.26□□□□□ -0.93
PHGDH-233ENST00000642021 PKD1L1Q8TDX9 2849 aa9.26□□□□□ -0.93
PHGDH-233ENST00000642021 TEP1Q99973 2627 aaKnown RBP9.25□□□□□ -0.93
PHGDH-233ENST00000642021 UBL5Q9BZL1 73 aa9.25□□□□□ -0.93
PHGDH-233ENST00000642021 GVQW2A0A096LPI5 108 aaPredicted RBP9.23□□□□□ -0.93
PHGDH-233ENST00000642021 MUC7Q8TAX7 377 aa9.23□□□□□ -0.93
PHGDH-233ENST00000642021 HIGD2BQ4VC39 106 aa9.23□□□□□ -0.93
PHGDH-233ENST00000642021 ATP5EP2Q5VTU8 51 aa9.23□□□□□ -0.93
PHGDH-233ENST00000642021 LOC110117498A0A087WWA1 95 aa9.22□□□□□ -0.93
PHGDH-233ENST00000642021 GHRHP01286 108 aa9.22□□□□□ -0.93
PHGDH-233ENST00000642021 WFDC10BQ8IUB3 73 aa9.22□□□□□ -0.93
PHGDH-233ENST00000642021 ANK2Q01484 3957 aa9.19□□□□□ -0.94
PHGDH-233ENST00000642021 ZNF73O43830 326 aaPredicted RBP9.19□□□□□ -0.94
PHGDH-233ENST00000642021 DIRC1Q969H9 104 aa9.19□□□□□ -0.94
PHGDH-233ENST00000642021 LINC01547P58512 204 aaPredicted RBP9.18□□□□□ -0.94
PHGDH-233ENST00000642021 KRTAP26-1Q6PEX3 210 aa9.18□□□□□ -0.94
PHGDH-233ENST00000642021 Q6ZVQ6 151 aa9.18□□□□□ -0.94
PHGDH-233ENST00000642021 HAMPP81172 84 aa9.18□□□□□ -0.94
PHGDH-233ENST00000642021 SERP1Q9Y6X1 66 aa9.18□□□□□ -0.94
PHGDH-233ENST00000642021 VPREB1P12018 145 aa9.18□□□□□ -0.94
PHGDH-233ENST00000642021 CAMK2N2Q96S95 79 aa9.18□□□□□ -0.94
PHGDH-233ENST00000642021 KMT2BQ9UMN6 2715 aaPredicted RBP9.18□□□□□ -0.94
PHGDH-233ENST00000642021 EPM2AB3EWF7 344 aa9.17□□□□□ -0.94
PHGDH-233ENST00000642021 PMAIP1Q13794 54 aa9.17□□□□□ -0.94
PHGDH-233ENST00000642021 FP248Q71RG6 208 aaPredicted RBP9.17□□□□□ -0.94
PHGDH-233ENST00000642021 KPRPQ5T749 579 aaPredicted RBP9.17□□□□□ -0.94
PHGDH-233ENST00000642021 Q6ZRU5 148 aa9.17□□□□□ -0.94
PHGDH-233ENST00000642021 COX7BP24311 80 aa9.16□□□□□ -0.94
PHGDH-233ENST00000642021 ELOF1P60002 83 aaKnown RBP9.16□□□□□ -0.94
PHGDH-233ENST00000642021 C4orf48Q5BLP8 95 aa9.16□□□□□ -0.94
PHGDH-233ENST00000642021 NDUFC2-KCTD14E9PQ53 114 aa9.15□□□□□ -0.94
PHGDH-233ENST00000642021 SMIM26A0A096LP01 95 aa9.15□□□□□ -0.95
PHGDH-233ENST00000642021 C15orf56Q8N910 161 aa9.15□□□□□ -0.95
PHGDH-233ENST00000642021 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.14□□□□□ -0.95
PHGDH-233ENST00000642021 Q6ZTC4 211 aa9.14□□□□□ -0.95
PHGDH-233ENST00000642021 TENM3Q9P273 2699 aa9.14□□□□□ -0.95
PHGDH-233ENST00000642021 TRAV10A0A0B4J240 114 aa9.13□□□□□ -0.95
PHGDH-233ENST00000642021 TRBV7-4A0A0J9YYF1 115 aa9.13□□□□□ -0.95
PHGDH-233ENST00000642021 C20orf197Q8N268 126 aa9.13□□□□□ -0.95
PHGDH-233ENST00000642021 EGFEM1PQ0D2K5 195 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms