RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 TRBV30A0A0K0K1B3 111 aa4.65□□□□□ -1.67
PHGDH-225ENST00000641720 LOC107984640A0A0U1RRK4 108 aa4.65□□□□□ -1.67
PHGDH-225ENST00000641720 CXCL5P42830 114 aa4.65□□□□□ -1.67
PHGDH-225ENST00000641720 RPL18AQ02543 176 aaKnown RBP4.65□□□□□ -1.67
PHGDH-225ENST00000641720 RNF151Q2KHN1 245 aa4.65□□□□□ -1.67
PHGDH-225ENST00000641720 Q6ZRP5 223 aa4.65□□□□□ -1.67
PHGDH-225ENST00000641720 ZNF625Q96I27 306 aaPredicted RBP4.65□□□□□ -1.67
PHGDH-225ENST00000641720 GAGE2BQ13066 116 aa4.64□□□□□ -1.67
PHGDH-225ENST00000641720 LCE2AQ5TA79 106 aaPredicted RBP4.64□□□□□ -1.67
PHGDH-225ENST00000641720 ATOH7Q8N100 152 aa4.64□□□□□ -1.67
PHGDH-225ENST00000641720 NDUFC2-KCTD14E9PQ53 114 aa4.63□□□□□ -1.67
PHGDH-225ENST00000641720 LEPROTO15243 131 aa4.63□□□□□ -1.67
PHGDH-225ENST00000641720 TLX1NBP0CAT3 122 aa4.63□□□□□ -1.67
PHGDH-225ENST00000641720 STPG4Q8N801 248 aa4.63□□□□□ -1.67
PHGDH-225ENST00000641720 MUC17Q685J3 4493 aa4.63□□□□□ -1.67
PHGDH-225ENST00000641720 A0A087WYN8 130 aa4.62□□□□□ -1.67
PHGDH-225ENST00000641720 IGKV2D-26A0A0A0MRZ7 120 aa4.62□□□□□ -1.67
PHGDH-225ENST00000641720 FAM168BA1KXE4 195 aa4.62□□□□□ -1.67
PHGDH-225ENST00000641720 C20orf202A1L168 122 aa4.62□□□□□ -1.67
PHGDH-225ENST00000641720 J3QQQ9 107 aa4.62□□□□□ -1.67
PHGDH-225ENST00000641720 KRTAP10-8P60410 259 aa4.62□□□□□ -1.67
PHGDH-225ENST00000641720 HERVK_113P61574 105 aa4.62□□□□□ -1.67
PHGDH-225ENST00000641720 HERV-K104P63124 156 aa4.62□□□□□ -1.67
PHGDH-225ENST00000641720 GAGE2EQ4V326 116 aa4.62□□□□□ -1.67
PHGDH-225ENST00000641720 C9orf129Q5T035 196 aaKnown RBP4.62□□□□□ -1.67
PHGDH-225ENST00000641720 KRTAP7-1Q8IUC3 87 aa4.62□□□□□ -1.67
PHGDH-225ENST00000641720 PLAC8Q9NZF1 115 aa4.62□□□□□ -1.67
PHGDH-225ENST00000641720 GAGE2DQ9UEU5 116 aa4.62□□□□□ -1.67
PHGDH-225ENST00000641720 NDUFA12Q9UI09 145 aa4.62□□□□□ -1.67
PHGDH-225ENST00000641720 ERG28Q9UKR5 140 aa4.62□□□□□ -1.67
PHGDH-225ENST00000641720 PKIGQ9Y2B9 76 aa4.62□□□□□ -1.67
PHGDH-225ENST00000641720 A0A1W2PNN7 141 aa4.61□□□□□ -1.67
PHGDH-225ENST00000641720 E9PLD3 99 aa4.61□□□□□ -1.67
PHGDH-225ENST00000641720 C5orf47Q569G3 176 aa4.61□□□□□ -1.67
PHGDH-225ENST00000641720 PLEKHB2Q96CS7 222 aa4.61□□□□□ -1.67
PHGDH-225ENST00000641720 LINC01600Q96MT4 127 aa4.61□□□□□ -1.67
PHGDH-225ENST00000641720 TTTY13Q9BZ97 58 aa4.61□□□□□ -1.67
PHGDH-225ENST00000641720 XAGE1AQ9HD64 81 aa4.61□□□□□ -1.67
PHGDH-225ENST00000641720 B5MCH6 92 aa4.6□□□□□ -1.67
PHGDH-225ENST00000641720 LGALS3P17931 250 aaKnown RBP4.6□□□□□ -1.67
PHGDH-225ENST00000641720 PFN2P35080 140 aa4.6□□□□□ -1.67
PHGDH-225ENST00000641720 FAM19A5Q7Z5A7 132 aaPredicted RBP4.6□□□□□ -1.67
PHGDH-225ENST00000641720 LINC00474Q9P2X8 69 aa4.6□□□□□ -1.67
PHGDH-225ENST00000641720 SMIM13P0DJ93 91 aa4.59□□□□□ -1.67
PHGDH-225ENST00000641720 SFTA2Q6UW10 78 aa4.59□□□□□ -1.67
PHGDH-225ENST00000641720 Q8NDZ9 215 aa4.59□□□□□ -1.67
PHGDH-225ENST00000641720 DPH3Q96FX2 82 aa4.59□□□□□ -1.67
PHGDH-225ENST00000641720 SND1-IT1Q9HBX3 110 aa4.59□□□□□ -1.67
PHGDH-225ENST00000641720 MYMXA0A1B0GTQ4 84 aa4.58□□□□□ -1.68
PHGDH-225ENST00000641720 NMUP48645 174 aa4.58□□□□□ -1.68
PHGDH-225ENST00000641720 TP73-AS1Q9UF72 201 aa4.58□□□□□ -1.68
PHGDH-225ENST00000641720 A0A0A0MQY5 61 aa4.57□□□□□ -1.68
PHGDH-225ENST00000641720 A0A0J9YXY3 114 aa4.57□□□□□ -1.68
PHGDH-225ENST00000641720 ZNF815PA8K554 130 aa4.57□□□□□ -1.68
PHGDH-225ENST00000641720 M0QXV9 152 aa4.57□□□□□ -1.68
PHGDH-225ENST00000641720 LINC00158P58513 81 aa4.57□□□□□ -1.68
PHGDH-225ENST00000641720 COX17Q14061 63 aa4.57□□□□□ -1.68
PHGDH-225ENST00000641720 MEIG1Q5JSS6 88 aa4.57□□□□□ -1.68
PHGDH-225ENST00000641720 PHF5AQ7RTV0 110 aaKnown RBP4.57□□□□□ -1.68
PHGDH-225ENST00000641720 KRTAP11-1Q8IUC1 163 aa4.57□□□□□ -1.68
PHGDH-225ENST00000641720 PCP2Q8IVA1 136 aa4.57□□□□□ -1.68
PHGDH-225ENST00000641720 BOD1L2Q8IYS8 172 aa4.57□□□□□ -1.68
PHGDH-225ENST00000641720 DAND5Q8N907 189 aa4.57□□□□□ -1.68
PHGDH-225ENST00000641720 AKR1D1P51857 326 aa4.56□□□□□ -1.68
PHGDH-225ENST00000641720 ADAMTSL4-AS1Q5T5F5 129 aa4.56□□□□□ -1.68
PHGDH-225ENST00000641720 MIR7-3HGQ8N6C7 128 aa4.56□□□□□ -1.68
PHGDH-225ENST00000641720 LITAFQ99732 161 aa4.56□□□□□ -1.68
PHGDH-225ENST00000641720 TMEM238C9JI98 176 aa4.55□□□□□ -1.68
PHGDH-225ENST00000641720 JOSD1Q15040 202 aaPredicted RBP4.55□□□□□ -1.68
PHGDH-225ENST00000641720 PYY3Q5JQD4 70 aa4.55□□□□□ -1.68
PHGDH-225ENST00000641720 IGLV5-37A0A075B6J1 123 aa4.54□□□□□ -1.68
PHGDH-225ENST00000641720 TRIAP1O43715 76 aa4.54□□□□□ -1.68
PHGDH-225ENST00000641720 PRR3P79522 188 aaKnown RBP4.54□□□□□ -1.68
PHGDH-225ENST00000641720 UBE2V1Q13404 147 aa4.54□□□□□ -1.68
PHGDH-225ENST00000641720 SOSTDC1Q6X4U4 206 aa4.54□□□□□ -1.68
PHGDH-225ENST00000641720 C7orf33Q8WU49 177 aa4.54□□□□□ -1.68
PHGDH-225ENST00000641720 C22orf24Q9Y442 160 aa4.54□□□□□ -1.68
PHGDH-225ENST00000641720 PRYO14603 147 aa4.53□□□□□ -1.68
PHGDH-225ENST00000641720 TIMM17BO60830 172 aa4.53□□□□□ -1.68
PHGDH-225ENST00000641720 NPC2P61916 151 aa4.53□□□□□ -1.68
PHGDH-225ENST00000641720 PAM16Q9Y3D7 125 aa4.53□□□□□ -1.68
PHGDH-225ENST00000641720 LINC00587B1AMM8 73 aa4.52□□□□□ -1.69
PHGDH-225ENST00000641720 NCR3O14931 201 aa4.52□□□□□ -1.69
PHGDH-225ENST00000641720 SPATA45Q537H7 98 aa4.52□□□□□ -1.69
PHGDH-225ENST00000641720 SCGB1D4Q6XE38 83 aa4.52□□□□□ -1.69
PHGDH-225ENST00000641720 MRPL55Q7Z7F7 128 aaKnown RBP4.52□□□□□ -1.69
PHGDH-225ENST00000641720 NKAPP1Q8N9T2 125 aa4.52□□□□□ -1.69
PHGDH-225ENST00000641720 LINC00167Q96N53 147 aa4.52□□□□□ -1.69
PHGDH-225ENST00000641720 VAMP8Q9BV40 100 aa4.52□□□□□ -1.69
PHGDH-225ENST00000641720 PSORS1C2Q9UIG4 136 aa4.52□□□□□ -1.69
PHGDH-225ENST00000641720 LOC107984156A0A0G2JMH3 177 aa4.51□□□□□ -1.69
PHGDH-225ENST00000641720 RPL37AP8A6NKH3 93 aa4.51□□□□□ -1.69
PHGDH-225ENST00000641720 UBE2BP63146 152 aa4.51□□□□□ -1.69
PHGDH-225ENST00000641720 SRSF9Q13242 221 aaKnown RBP eCLIP4.51□□□□□ -1.69
PHGDH-225ENST00000641720 ARL17AQ8IVW1 177 aa4.51□□□□□ -1.69
PHGDH-225ENST00000641720 LINC00308Q8TCZ7 52 aa4.51□□□□□ -1.69
PHGDH-225ENST00000641720 IGKV2-28A0A075B6P5 120 aa4.5□□□□□ -1.69
PHGDH-225ENST00000641720 IGKV2D-28P01615 120 aa4.5□□□□□ -1.69
PHGDH-225ENST00000641720 COX8AP10176 69 aa4.5□□□□□ -1.69
PHGDH-225ENST00000641720 GAGE2AQ6NT46 116 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms