RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 M0R378 163 aa4.28□□□□□ -1.72
PHGDH-217ENST00000641455 Q8N377 158 aa4.28□□□□□ -1.72
PHGDH-217ENST00000641455 SCGB3A1Q96QR1 104 aa4.28□□□□□ -1.72
PHGDH-217ENST00000641455 SMCO4Q9NRQ5 59 aa4.28□□□□□ -1.72
PHGDH-217ENST00000641455 SSPOA2VEC9 5147 aa4.28□□□□□ -1.72
PHGDH-217ENST00000641455 TRAV9-1A0A075B6T8 112 aa4.27□□□□□ -1.73
PHGDH-217ENST00000641455 IFITM2Q01629 132 aa4.27□□□□□ -1.73
PHGDH-217ENST00000641455 COX19Q49B96 90 aa4.27□□□□□ -1.73
PHGDH-217ENST00000641455 ERASQ7Z444 233 aa4.27□□□□□ -1.73
PHGDH-217ENST00000641455 AMELXQ99217 191 aa4.27□□□□□ -1.73
PHGDH-217ENST00000641455 TIMM17AQ99595 171 aa4.27□□□□□ -1.73
PHGDH-217ENST00000641455 IGLV9-49A0A0B4J1Y8 123 aa4.26□□□□□ -1.73
PHGDH-217ENST00000641455 IGIPA6NJ69 53 aa4.26□□□□□ -1.73
PHGDH-217ENST00000641455 H3BRM9 83 aa4.26□□□□□ -1.73
PHGDH-217ENST00000641455 MOBPQ13875 183 aa4.26□□□□□ -1.73
PHGDH-217ENST00000641455 UQCC3Q6UW78 93 aa4.26□□□□□ -1.73
PHGDH-217ENST00000641455 FAM19A3Q7Z5A8 133 aa4.26□□□□□ -1.73
PHGDH-217ENST00000641455 TOMM6Q96B49 74 aa4.26□□□□□ -1.73
PHGDH-217ENST00000641455 MRPL18Q9H0U6 180 aaKnown RBP4.26□□□□□ -1.73
PHGDH-217ENST00000641455 CDKN2A-AS1Q9UH64 79 aa4.26□□□□□ -1.73
PHGDH-217ENST00000641455 C9orf92A6NGG3 77 aa4.25□□□□□ -1.73
PHGDH-217ENST00000641455 ATP5LO75964 103 aa4.25□□□□□ -1.73
PHGDH-217ENST00000641455 RPS29P62273 56 aaKnown RBP4.25□□□□□ -1.73
PHGDH-217ENST00000641455 PDZD11Q5EBL8 140 aa4.25□□□□□ -1.73
PHGDH-217ENST00000641455 FA2HQ7L5A8 372 aa4.25□□□□□ -1.73
PHGDH-217ENST00000641455 COX7B2Q8TF08 81 aa4.25□□□□□ -1.73
PHGDH-217ENST00000641455 FCGBPQ9Y6R7 5405 aaPredicted RBP4.25□□□□□ -1.73
PHGDH-217ENST00000641455 FLGP20930 4061 aaPredicted RBP4.25□□□□□ -1.73
PHGDH-217ENST00000641455 USH2AO75445 5202 aa4.24□□□□□ -1.73
PHGDH-217ENST00000641455 TINCRA0A1B0GVN0 87 aa4.24□□□□□ -1.73
PHGDH-217ENST00000641455 KRTAP4-16G5E9R7 235 aaPredicted RBP4.24□□□□□ -1.73
PHGDH-217ENST00000641455 VPREB1P12018 145 aa4.24□□□□□ -1.73
PHGDH-217ENST00000641455 PFN2P35080 140 aa4.24□□□□□ -1.73
PHGDH-217ENST00000641455 RPL24P83731 157 aaKnown RBP4.24□□□□□ -1.73
PHGDH-217ENST00000641455 CLLU1Q5K131 121 aa4.24□□□□□ -1.73
PHGDH-217ENST00000641455 SLC7A5P1Q8MH63 180 aa4.24□□□□□ -1.73
PHGDH-217ENST00000641455 MACF1Q9UPN3 7388 aaKnown RBP4.23□□□□□ -1.73
PHGDH-217ENST00000641455 CFC1P0CG37 223 aa4.23□□□□□ -1.73
PHGDH-217ENST00000641455 NDUFA6P56556 154 aa4.23□□□□□ -1.73
PHGDH-217ENST00000641455 FABP9Q0Z7S8 132 aa4.23□□□□□ -1.73
PHGDH-217ENST00000641455 PMVKQ15126 192 aa4.23□□□□□ -1.73
PHGDH-217ENST00000641455 KIAA1644Q3SXP7 199 aa4.23□□□□□ -1.73
PHGDH-217ENST00000641455 GAGE2AQ6NT46 116 aa4.23□□□□□ -1.73
PHGDH-217ENST00000641455 SFTA2Q6UW10 78 aa4.23□□□□□ -1.73
PHGDH-217ENST00000641455 TMEM218A2RU14 115 aa4.22□□□□□ -1.73
PHGDH-217ENST00000641455 SMIM1B2RUZ4 78 aa4.22□□□□□ -1.73
PHGDH-217ENST00000641455 SMCR5Q8TEV8 140 aa4.22□□□□□ -1.73
PHGDH-217ENST00000641455 SEC11CQ9BY50 192 aa4.22□□□□□ -1.73
PHGDH-217ENST00000641455 CST9LQ9H4G1 147 aa4.22□□□□□ -1.73
PHGDH-217ENST00000641455 Q6Q795 121 aa4.21□□□□□ -1.74
PHGDH-217ENST00000641455 SSBP3-AS1Q7Z2R9 100 aa4.21□□□□□ -1.74
PHGDH-217ENST00000641455 KRTAP19-1Q8IUB9 90 aa4.21□□□□□ -1.74
PHGDH-217ENST00000641455 SND1-IT1Q9HBX3 110 aa4.21□□□□□ -1.74
PHGDH-217ENST00000641455 SPINK8P0C7L1 97 aa4.2□□□□□ -1.74
PHGDH-217ENST00000641455 COX17Q14061 63 aa4.2□□□□□ -1.74
PHGDH-217ENST00000641455 C9orf153Q5TBE3 101 aa4.2□□□□□ -1.74
PHGDH-217ENST00000641455 RPS10P5Q9NQ39 176 aa4.2□□□□□ -1.74
PHGDH-217ENST00000641455 IGLV5-45A0A087WSX0 123 aa4.19□□□□□ -1.74
PHGDH-217ENST00000641455 LINC00614P0C842 121 aa4.19□□□□□ -1.74
PHGDH-217ENST00000641455 S100A12P80511 92 aa4.19□□□□□ -1.74
PHGDH-217ENST00000641455 RHEBQ15382 184 aa4.19□□□□□ -1.74
PHGDH-217ENST00000641455 LINC00483Q53H64 154 aa4.19□□□□□ -1.74
PHGDH-217ENST00000641455 TRAPPC1Q9Y5R8 145 aa4.19□□□□□ -1.74
PHGDH-217ENST00000641455 ETDCA0A1B0GVM5 59 aa4.18□□□□□ -1.74
PHGDH-217ENST00000641455 LINC01546A6NGU7 62 aa4.18□□□□□ -1.74
PHGDH-217ENST00000641455 IGLV6-57P01721 117 aa4.18□□□□□ -1.74
PHGDH-217ENST00000641455 ADCYAP1P18509 176 aa4.18□□□□□ -1.74
PHGDH-217ENST00000641455 TMEM170BQ5T4T1 132 aa4.18□□□□□ -1.74
PHGDH-217ENST00000641455 Q8NDZ9 215 aa4.18□□□□□ -1.74
PHGDH-217ENST00000641455 ERG28Q9UKR5 140 aa4.18□□□□□ -1.74
PHGDH-217ENST00000641455 LINC00587B1AMM8 73 aa4.17□□□□□ -1.74
PHGDH-217ENST00000641455 PRYO14603 147 aa4.17□□□□□ -1.74
PHGDH-217ENST00000641455 HBDP02042 147 aa4.17□□□□□ -1.74
PHGDH-217ENST00000641455 COMMD7Q86VX2 200 aa4.17□□□□□ -1.74
PHGDH-217ENST00000641455 BAGE3Q86Y29 109 aa4.17□□□□□ -1.74
PHGDH-217ENST00000641455 IGLC3P0DOY3 106 aa4.16□□□□□ -1.74
PHGDH-217ENST00000641455 LINC00158P58513 81 aa4.16□□□□□ -1.74
PHGDH-217ENST00000641455 ZNF625Q96I27 306 aaPredicted RBP4.16□□□□□ -1.74
PHGDH-217ENST00000641455 SNAPINO95295 136 aa4.15□□□□□ -1.75
PHGDH-217ENST00000641455 HRCT1Q6UXD1 115 aa4.15□□□□□ -1.75
PHGDH-217ENST00000641455 SVBPQ8N300 66 aa4.15□□□□□ -1.75
PHGDH-217ENST00000641455 LIMD2Q9BT23 127 aa4.15□□□□□ -1.75
PHGDH-217ENST00000641455 IGLV5-39A0A0G2JS06 123 aa4.14□□□□□ -1.75
PHGDH-217ENST00000641455 LOC105371267A0A1B0GV96 52 aa4.14□□□□□ -1.75
PHGDH-217ENST00000641455 NCR3O14931 201 aa4.14□□□□□ -1.75
PHGDH-217ENST00000641455 RPL37P61927 97 aaKnown RBP4.14□□□□□ -1.75
PHGDH-217ENST00000641455 MAP1LC3CQ9BXW4 147 aa4.14□□□□□ -1.75
PHGDH-217ENST00000641455 CHTOPQ9Y3Y2 248 aaKnown RBP4.14□□□□□ -1.75
PHGDH-217ENST00000641455 ERC2-IT1O76042 136 aa4.13□□□□□ -1.75
PHGDH-217ENST00000641455 APOC3P02656 99 aa4.13□□□□□ -1.75
PHGDH-217ENST00000641455 ZNF22P17026 224 aaPredicted RBP4.13□□□□□ -1.75
PHGDH-217ENST00000641455 HERV-K104P63124 156 aa4.13□□□□□ -1.75
PHGDH-217ENST00000641455 MEIG1Q5JSS6 88 aa4.13□□□□□ -1.75
PHGDH-217ENST00000641455 C18orf32Q8TCD1 76 aa4.13□□□□□ -1.75
PHGDH-217ENST00000641455 CHCHD1Q96BP2 118 aaKnown RBP4.13□□□□□ -1.75
PHGDH-217ENST00000641455 KRTAP9-8Q9BYQ0 159 aa4.13□□□□□ -1.75
PHGDH-217ENST00000641455 A0A0U1RRA0 63 aa4.12□□□□□ -1.75
PHGDH-217ENST00000641455 SPRR1AP35321 89 aa4.12□□□□□ -1.75
PHGDH-217ENST00000641455 C10orf91Q5T1B1 145 aa4.12□□□□□ -1.75
PHGDH-217ENST00000641455 LINC00846Q9NV44 126 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 212.3 ms