RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 MAPK1IP1LQ8NDC0 245 aa3.48□□□□□ -1.85
HNRNPU-230ENST00000640657 XAGE1AQ9HD64 81 aa3.48□□□□□ -1.85
HNRNPU-230ENST00000640657 AKAP6Q13023 2319 aa3.48□□□□□ -1.85
HNRNPU-230ENST00000640657 CACNA1BQ00975 2339 aa3.48□□□□□ -1.85
HNRNPU-230ENST00000640657 GVQW2A0A096LPI5 108 aaPredicted RBP3.48□□□□□ -1.85
HNRNPU-230ENST00000640657 A0A0J9YWU9 116 aa3.48□□□□□ -1.85
HNRNPU-230ENST00000640657 C3orf84H3BNL1 204 aa3.48□□□□□ -1.85
HNRNPU-230ENST00000640657 IGHV4-30-4P0DP06 118 aa3.48□□□□□ -1.85
HNRNPU-230ENST00000640657 SYCNQ0VAF6 134 aa3.48□□□□□ -1.85
HNRNPU-230ENST00000640657 Q5XG85 94 aa3.48□□□□□ -1.85
HNRNPU-230ENST00000640657 IL17DQ8TAD2 202 aa3.48□□□□□ -1.85
HNRNPU-230ENST00000640657 CELA1Q9UNI1 258 aa3.48□□□□□ -1.85
HNRNPU-230ENST00000640657 AVPP01185 164 aa3.48□□□□□ -1.85
HNRNPU-230ENST00000640657 ELOF1P60002 83 aaKnown RBP3.48□□□□□ -1.85
HNRNPU-230ENST00000640657 CDSNQ15517 529 aa3.48□□□□□ -1.85
HNRNPU-230ENST00000640657 SPTSSBQ8NFR3 76 aa3.48□□□□□ -1.85
HNRNPU-230ENST00000640657 FAM104AQ969W3 186 aa3.48□□□□□ -1.85
HNRNPU-230ENST00000640657 TM2D3Q9BRN9 247 aa3.48□□□□□ -1.85
HNRNPU-230ENST00000640657 DNAJC9-AS1A6NH13 148 aa3.47□□□□□ -1.85
HNRNPU-230ENST00000640657 IGLV1-51P01701 117 aa3.47□□□□□ -1.85
HNRNPU-230ENST00000640657 IGLV6-57P01721 117 aa3.47□□□□□ -1.85
HNRNPU-230ENST00000640657 Q9UF83 564 aa3.47□□□□□ -1.85
HNRNPU-230ENST00000640657 PRB1P04280 392 aa3.47□□□□□ -1.85
HNRNPU-230ENST00000640657 C1orf137Q5JT78 98 aa3.47□□□□□ -1.85
HNRNPU-230ENST00000640657 C18orf65Q6ZTR6 163 aa3.47□□□□□ -1.85
HNRNPU-230ENST00000640657 A0A1W2PPR1 153 aa3.47□□□□□ -1.85
HNRNPU-230ENST00000640657 A6NED7 52 aa3.47□□□□□ -1.85
HNRNPU-230ENST00000640657 LINC01006Q8NI28 216 aa3.47□□□□□ -1.85
HNRNPU-230ENST00000640657 HCG22E2RYF7 251 aa3.46□□□□□ -1.85
HNRNPU-230ENST00000640657 C9orf116Q5BN46 136 aaPredicted RBP3.46□□□□□ -1.86
HNRNPU-230ENST00000640657 C10orf25Q5T742 122 aa3.46□□□□□ -1.86
HNRNPU-230ENST00000640657 DOPEY2Q9Y3R5 2298 aa3.46□□□□□ -1.86
HNRNPU-230ENST00000640657 PKD1L2Q7Z442 2459 aa3.46□□□□□ -1.86
HNRNPU-230ENST00000640657 TRBV7-4A0A0J9YYF1 115 aa3.46□□□□□ -1.86
HNRNPU-230ENST00000640657 KPRPQ5T749 579 aaPredicted RBP3.46□□□□□ -1.86
HNRNPU-230ENST00000640657 MED13LQ71F56 2210 aa3.46□□□□□ -1.86
HNRNPU-230ENST00000640657 HIGD2AQ9BW72 106 aa3.46□□□□□ -1.86
HNRNPU-230ENST00000640657 B9D2Q9BPU9 175 aa3.46□□□□□ -1.86
HNRNPU-230ENST00000640657 CYP4F30PQ9H0H9 118 aa3.46□□□□□ -1.86
HNRNPU-230ENST00000640657 WFDC10AQ9H1F0 79 aa3.46□□□□□ -1.86
HNRNPU-230ENST00000640657 PRR15LQ9BU68 103 aa3.45□□□□□ -1.86
HNRNPU-230ENST00000640657 MUC4Q99102 2169 aa3.45□□□□□ -1.86
HNRNPU-230ENST00000640657 IGSF10Q6WRI0 2623 aa3.45□□□□□ -1.86
HNRNPU-230ENST00000640657 DEFB135Q30KP9 77 aa3.45□□□□□ -1.86
HNRNPU-230ENST00000640657 C16orf95Q9H693 158 aa3.45□□□□□ -1.86
HNRNPU-230ENST00000640657 FASNP49327 2511 aaKnown RBP3.44□□□□□ -1.86
HNRNPU-230ENST00000640657 CD164Q04900 197 aa3.44□□□□□ -1.86
HNRNPU-230ENST00000640657 PRR15Q8IV56 129 aa3.44□□□□□ -1.86
HNRNPU-230ENST00000640657 NBPF19A0A087WUL8 3843 aa3.44□□□□□ -1.86
HNRNPU-230ENST00000640657 C9orf129Q5T035 196 aaKnown RBP3.44□□□□□ -1.86
HNRNPU-230ENST00000640657 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.44□□□□□ -1.864e-21■■■■■ 27.1
HNRNPU-230ENST00000640657 PSPHP1O15172 72 aa3.44□□□□□ -1.86
HNRNPU-230ENST00000640657 OXLD1Q5BKU9 147 aa3.44□□□□□ -1.86
HNRNPU-230ENST00000640657 LINC00208Q96KT6 92 aa3.44□□□□□ -1.86
HNRNPU-230ENST00000640657 ESM1Q9NQ30 184 aa3.44□□□□□ -1.86
HNRNPU-230ENST00000640657 PSCAO43653 123 aa3.43□□□□□ -1.86
HNRNPU-230ENST00000640657 SMIM29Q86T20 159 aa3.43□□□□□ -1.86
HNRNPU-230ENST00000640657 LINC00474Q9P2X8 69 aa3.43□□□□□ -1.86
HNRNPU-230ENST00000640657 USP24Q9UPU5 2620 aa3.43□□□□□ -1.86
HNRNPU-230ENST00000640657 RPL37AP8A6NKH3 93 aa3.43□□□□□ -1.86
HNRNPU-230ENST00000640657 C22orf24Q9Y442 160 aa3.43□□□□□ -1.86
HNRNPU-230ENST00000640657 KIAA0087Q14695 138 aa3.43□□□□□ -1.86
HNRNPU-230ENST00000640657 WFDC10BQ8IUB3 73 aa3.43□□□□□ -1.86
HNRNPU-230ENST00000640657 H0Y9J4 135 aa3.43□□□□□ -1.86
HNRNPU-230ENST00000640657 Q1T7F1 81 aa3.43□□□□□ -1.86
HNRNPU-230ENST00000640657 Q8NBF4 154 aa3.43□□□□□ -1.86
HNRNPU-230ENST00000640657 PTPRQQ9UMZ3 2332 aa3.42□□□□□ -1.86
HNRNPU-230ENST00000640657 C14orf177Q52M58 125 aa3.42□□□□□ -1.86
HNRNPU-230ENST00000640657 WFDC13Q8IUB5 93 aa3.42□□□□□ -1.86
HNRNPU-230ENST00000640657 PLA2G2AP14555 144 aa3.42□□□□□ -1.86
HNRNPU-230ENST00000640657 LRCOL1A6NCL2 159 aa3.42□□□□□ -1.86
HNRNPU-230ENST00000640657 H0Y9P7 68 aa3.42□□□□□ -1.86
HNRNPU-230ENST00000640657 PRB2P02812 416 aaPredicted RBP3.42□□□□□ -1.86
HNRNPU-230ENST00000640657 IGKV4-1P06312 121 aa3.42□□□□□ -1.86
HNRNPU-230ENST00000640657 RETNQ9HD89 108 aa3.42□□□□□ -1.86
HNRNPU-230ENST00000640657 CASC2Q6XLA1 102 aa3.41□□□□□ -1.86
HNRNPU-230ENST00000640657 C6orf48Q9UBA6 75 aa3.41□□□□□ -1.86
HNRNPU-230ENST00000640657 SPG11Q96JI7 2443 aa3.41□□□□□ -1.86
HNRNPU-230ENST00000640657 FSHBP01225 129 aa3.41□□□□□ -1.86
HNRNPU-230ENST00000640657 PRR4Q16378 134 aa3.41□□□□□ -1.86
HNRNPU-230ENST00000640657 FLNBO75369 2602 aaKnown RBP3.41□□□□□ -1.86
HNRNPU-230ENST00000640657 LRRK2Q5S007 2527 aa3.41□□□□□ -1.86
HNRNPU-230ENST00000640657 POLQO75417 2590 aa3.41□□□□□ -1.86
HNRNPU-230ENST00000640657 VPREB1P12018 145 aa3.41□□□□□ -1.86
HNRNPU-230ENST00000640657 NOTCH2Q04721 2471 aa3.41□□□□□ -1.86
HNRNPU-230ENST00000640657 Q8N9L7 120 aa3.41□□□□□ -1.86
HNRNPU-230ENST00000640657 DEFB4AO15263 64 aa3.4□□□□□ -1.86
HNRNPU-230ENST00000640657 NANOS2P60321 138 aaKnown RBP3.4□□□□□ -1.86
HNRNPU-230ENST00000640657 LINC00528Q8N1L1 170 aa3.4□□□□□ -1.86
HNRNPU-230ENST00000640657 CYSTM1Q9H1C7 97 aa3.4□□□□□ -1.86
HNRNPU-230ENST00000640657 LINC00612Q8N6U2 182 aa3.4□□□□□ -1.86
HNRNPU-230ENST00000640657 TP53AIP1Q9HCN2 124 aa3.4□□□□□ -1.86
HNRNPU-230ENST00000640657 HELZ2Q9BYK8 2649 aaKnown RBP3.4□□□□□ -1.87
HNRNPU-230ENST00000640657 EPM2AB3EWF7 344 aa3.4□□□□□ -1.87
HNRNPU-230ENST00000640657 H3BNG1 76 aa3.4□□□□□ -1.87
HNRNPU-230ENST00000640657 UBE2DNLQ8IWF7 75 aa3.4□□□□□ -1.87
HNRNPU-230ENST00000640657 OCR1Q9BZK8 76 aa3.4□□□□□ -1.87
HNRNPU-230ENST00000640657 OXTP01178 125 aa3.4□□□□□ -1.87
HNRNPU-230ENST00000640657 ATP11AUNQ6ZP68 121 aa3.4□□□□□ -1.87
HNRNPU-230ENST00000640657 ZANQ9Y493 2812 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms