RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 ZNF706Q9Y5V0 76 aaPredicted RBP8.54□□□□□ -1.04
TARDBP-231ENST00000639599 M0R378 163 aa8.53□□□□□ -1.04
TARDBP-231ENST00000639599 COMMD7Q86VX2 200 aa8.53□□□□□ -1.04
TARDBP-231ENST00000639599 PMCHL1Q16048 86 aa8.52□□□□□ -1.05
TARDBP-231ENST00000639599 TPRXLQ17RH7 258 aa8.52□□□□□ -1.05
TARDBP-231ENST00000639599 A0A0U1RRA0 63 aa8.51□□□□□ -1.05
TARDBP-231ENST00000639599 C11orf86A6NJI1 115 aa8.51□□□□□ -1.05
TARDBP-231ENST00000639599 S100A12P80511 92 aa8.51□□□□□ -1.05
TARDBP-231ENST00000639599 MEIG1Q5JSS6 88 aa8.51□□□□□ -1.05
TARDBP-231ENST00000639599 SPAG11AQ6PDA7 123 aa8.51□□□□□ -1.05
TARDBP-231ENST00000639599 PLEKHB2Q96CS7 222 aa8.51□□□□□ -1.05
TARDBP-231ENST00000639599 CHTOPQ9Y3Y2 248 aaKnown RBP8.51□□□□□ -1.05
TARDBP-231ENST00000639599 C18orf32Q8TCD1 76 aa8.5□□□□□ -1.05
TARDBP-231ENST00000639599 C3orf22Q8N5N4 141 aa8.49□□□□□ -1.05
TARDBP-231ENST00000639599 PPDPFQ9H3Y8 114 aa8.49□□□□□ -1.05
TARDBP-231ENST00000639599 MUC2Q02817 5179 aa8.49□□□□□ -1.05
TARDBP-231ENST00000639599 A0A096LNJ9 63 aa8.48□□□□□ -1.05
TARDBP-231ENST00000639599 ETDCA0A1B0GVM5 59 aa8.47□□□□□ -1.05
TARDBP-231ENST00000639599 PRYO14603 147 aa8.47□□□□□ -1.05
TARDBP-231ENST00000639599 BOD1L2Q8IYS8 172 aa8.47□□□□□ -1.05
TARDBP-231ENST00000639599 LINC00337Q8N6G1 96 aa8.47□□□□□ -1.05
TARDBP-231ENST00000639599 SPRR4Q96PI1 79 aa8.47□□□□□ -1.05
TARDBP-231ENST00000639599 LINC00587B1AMM8 73 aa8.46□□□□□ -1.06
TARDBP-231ENST00000639599 NCR3O14931 201 aa8.46□□□□□ -1.06
TARDBP-231ENST00000639599 NDUFA5Q16718 116 aa8.45□□□□□ -1.06
TARDBP-231ENST00000639599 Q8NDZ9 215 aa8.45□□□□□ -1.06
TARDBP-231ENST00000639599 URB1-AS1Q96HZ7 61 aa8.45□□□□□ -1.06
TARDBP-231ENST00000639599 MAP1LC3CQ9BXW4 147 aa8.45□□□□□ -1.06
TARDBP-231ENST00000639599 SMIM13P0DJ93 91 aa8.44□□□□□ -1.06
TARDBP-231ENST00000639599 HERV-K104P63124 156 aa8.44□□□□□ -1.06
TARDBP-231ENST00000639599 FP248Q71RG6 208 aaPredicted RBP8.44□□□□□ -1.06
TARDBP-231ENST00000639599 TMEM223A0PJW6 202 aa8.43□□□□□ -1.06
TARDBP-231ENST00000639599 IFITM2Q01629 132 aa8.43□□□□□ -1.06
TARDBP-231ENST00000639599 IFI27L1Q96BM0 104 aa8.43□□□□□ -1.06
TARDBP-231ENST00000639599 NDUFA12Q9UI09 145 aa8.43□□□□□ -1.06
TARDBP-231ENST00000639599 TRAV12-1A0A0B4J245 112 aa8.42□□□□□ -1.06
TARDBP-231ENST00000639599 C10orf91Q5T1B1 145 aa8.42□□□□□ -1.06
TARDBP-231ENST00000639599 MIR7-3HGQ8N6C7 128 aa8.42□□□□□ -1.06
TARDBP-231ENST00000639599 Q8NBF4 154 aa8.42□□□□□ -1.06
TARDBP-231ENST00000639599 CHCHD1Q96BP2 118 aaKnown RBP8.42□□□□□ -1.06
TARDBP-231ENST00000639599 SNAPINO95295 136 aa8.41□□□□□ -1.06
TARDBP-231ENST00000639599 APOC3P02656 99 aa8.41□□□□□ -1.06
TARDBP-231ENST00000639599 KRTAP9-2Q9BYQ4 174 aa8.41□□□□□ -1.06
TARDBP-231ENST00000639599 MYMXA0A1B0GTQ4 84 aa8.4□□□□□ -1.06
TARDBP-231ENST00000639599 H0Y8G0 127 aa8.4□□□□□ -1.06
TARDBP-231ENST00000639599 SVBPQ8N300 66 aa8.4□□□□□ -1.06
TARDBP-231ENST00000639599 DAND5Q8N907 189 aa8.4□□□□□ -1.06
TARDBP-231ENST00000639599 SMCR5Q8TEV8 140 aa8.4□□□□□ -1.06
TARDBP-231ENST00000639599 HSBP1O75506 76 aa8.39□□□□□ -1.07
TARDBP-231ENST00000639599 SPINK1P00995 79 aa8.39□□□□□ -1.07
TARDBP-231ENST00000639599 KCNQ1DNQ9H478 68 aa8.39□□□□□ -1.07
TARDBP-231ENST00000639599 GAGE2AQ6NT46 116 aa8.38□□□□□ -1.07
TARDBP-231ENST00000639599 MIEN1Q9BRT3 115 aa8.38□□□□□ -1.07
TARDBP-231ENST00000639599 IGLV9-49A0A0B4J1Y8 123 aa8.37□□□□□ -1.07
TARDBP-231ENST00000639599 TRBV10-3A0A0K0K1G6 114 aa8.37□□□□□ -1.07
TARDBP-231ENST00000639599 FAM19A2Q8N3H0 131 aa8.37□□□□□ -1.07
TARDBP-231ENST00000639599 LCE2AQ5TA79 106 aaPredicted RBP8.36□□□□□ -1.07
TARDBP-231ENST00000639599 DDTP30046 118 aa8.35□□□□□ -1.07
TARDBP-231ENST00000639599 SPRR1AP35321 89 aa8.35□□□□□ -1.07
TARDBP-231ENST00000639599 MOBPQ13875 183 aa8.35□□□□□ -1.07
TARDBP-231ENST00000639599 HERVK_113P61574 105 aa8.34□□□□□ -1.07
TARDBP-231ENST00000639599 S100A7L2Q5SY68 101 aa8.34□□□□□ -1.07
TARDBP-231ENST00000639599 SEC61BP60468 96 aaKnown RBP8.33□□□□□ -1.08
TARDBP-231ENST00000639599 JOSD1Q15040 202 aaPredicted RBP8.32□□□□□ -1.08
TARDBP-231ENST00000639599 LINC00483Q53H64 154 aa8.32□□□□□ -1.08
TARDBP-231ENST00000639599 C9orf153Q5TBE3 101 aa8.32□□□□□ -1.08
TARDBP-231ENST00000639599 FAT4Q6V0I7 4981 aa8.32□□□□□ -1.08
TARDBP-231ENST00000639599 TRBV10-2A0A0K0K1G8 114 aa8.31□□□□□ -1.08
TARDBP-231ENST00000639599 B5MCH6 92 aa8.31□□□□□ -1.08
TARDBP-231ENST00000639599 LEPROTO15243 131 aa8.31□□□□□ -1.08
TARDBP-231ENST00000639599 LEPROTL1O95214 131 aa8.31□□□□□ -1.08
TARDBP-231ENST00000639599 LGALS3P17931 250 aaKnown RBP8.31□□□□□ -1.08
TARDBP-231ENST00000639599 PLNP26678 52 aa8.31□□□□□ -1.08
TARDBP-231ENST00000639599 LINC01547P58512 204 aaPredicted RBP8.31□□□□□ -1.08
TARDBP-231ENST00000639599 KRTAP13-3Q3SY46 172 aa8.31□□□□□ -1.08
TARDBP-231ENST00000639599 SSBP3-AS1Q7Z2R9 100 aa8.31□□□□□ -1.08
TARDBP-231ENST00000639599 SPANXB1Q9NS25 103 aaPredicted RBP8.31□□□□□ -1.08
TARDBP-231ENST00000639599 KRTAP4-16G5E9R7 235 aaPredicted RBP8.3□□□□□ -1.08
TARDBP-231ENST00000639599 SLC25A20O43772 301 aa8.29□□□□□ -1.08
TARDBP-231ENST00000639599 NMUP48645 174 aa8.29□□□□□ -1.08
TARDBP-231ENST00000639599 HINT1P49773 126 aaPredicted RBP8.29□□□□□ -1.08
TARDBP-231ENST00000639599 RPS29P62273 56 aaKnown RBP8.29□□□□□ -1.08
TARDBP-231ENST00000639599 ASB16-AS1Q495Z4 193 aa8.29□□□□□ -1.08
TARDBP-231ENST00000639599 J3QQQ9 107 aa8.28□□□□□ -1.08
TARDBP-231ENST00000639599 Q6ZRX8 168 aa8.28□□□□□ -1.08
TARDBP-231ENST00000639599 HSPB8Q9UJY1 196 aa8.28□□□□□ -1.08
TARDBP-231ENST00000639599 CBY1Q9Y3M2 126 aa8.28□□□□□ -1.08
TARDBP-231ENST00000639599 TRAV23DV6A0A075B6W5 121 aa8.27□□□□□ -1.09
TARDBP-231ENST00000639599 MUC17Q685J3 4493 aa8.27□□□□□ -1.09
TARDBP-231ENST00000639599 ERC2-IT1O76042 136 aa8.26□□□□□ -1.09
TARDBP-231ENST00000639599 DPM2O94777 84 aa8.26□□□□□ -1.09
TARDBP-231ENST00000639599 TSPEAR-AS2P59090 65 aa8.26□□□□□ -1.09
TARDBP-231ENST00000639599 Q8N377 158 aa8.25□□□□□ -1.09
TARDBP-231ENST00000639599 LOC107984156A0A0G2JMH3 177 aa8.24□□□□□ -1.09
TARDBP-231ENST00000639599 NDUFC2O95298 119 aa8.24□□□□□ -1.09
TARDBP-231ENST00000639599 IGKCP01834 107 aa8.24□□□□□ -1.09
TARDBP-231ENST00000639599 FABP4P15090 132 aa8.24□□□□□ -1.09
TARDBP-231ENST00000639599 NPC2P61916 151 aa8.24□□□□□ -1.09
TARDBP-231ENST00000639599 ARL17AQ8IVW1 177 aa8.24□□□□□ -1.09
TARDBP-231ENST00000639599 Q9BRP9 147 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 175.7 ms