RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 COPS9Q8WXC6 57 aa5.04□□□□□ -1.6
PNKP-229ENST00000637897 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.04□□□□□ -1.6
PNKP-229ENST00000637897 IGKV3OR2-268A0A0C4DH90 116 aa5.03□□□□□ -1.6
PNKP-229ENST00000637897 GAGE10A6NGK3 116 aa5.03□□□□□ -1.6
PNKP-229ENST00000637897 FAM229AH3BQW9 127 aa5.03□□□□□ -1.6
PNKP-229ENST00000637897 ANGP03950 147 aaKnown RBP5.03□□□□□ -1.6
PNKP-229ENST00000637897 MIAQ16674 131 aa5.03□□□□□ -1.6
PNKP-229ENST00000637897 LINC00269Q8N2A0 174 aa5.03□□□□□ -1.6
PNKP-229ENST00000637897 COX7B2Q8TF08 81 aa5.03□□□□□ -1.6
PNKP-229ENST00000637897 ZNF625Q96I27 306 aaPredicted RBP5.03□□□□□ -1.6
PNKP-229ENST00000637897 LITAFQ99732 161 aa5.03□□□□□ -1.6
PNKP-229ENST00000637897 TNXBP22105 4242 aa5.03□□□□□ -1.6
PNKP-229ENST00000637897 A0A0B4J2C4 111 aa5.02□□□□□ -1.61
PNKP-229ENST00000637897 KRTAP29-1A8MX34 341 aaPredicted RBP5.02□□□□□ -1.61
PNKP-229ENST00000637897 K7EP34 96 aa5.02□□□□□ -1.61
PNKP-229ENST00000637897 PRSS2P07478 247 aa5.02□□□□□ -1.61
PNKP-229ENST00000637897 LYRM7Q5U5X0 104 aa5.02□□□□□ -1.61
PNKP-229ENST00000637897 SDIM1Q6ZPB5 146 aa5.02□□□□□ -1.61
PNKP-229ENST00000637897 MUSTN1Q8IVN3 82 aa5.02□□□□□ -1.61
PNKP-229ENST00000637897 C9orf163Q8N9P6 203 aa5.02□□□□□ -1.61
PNKP-229ENST00000637897 C1orf43Q9BWL3 253 aa5.02□□□□□ -1.61
PNKP-229ENST00000637897 PPDPFQ9H3Y8 114 aa5.02□□□□□ -1.61
PNKP-229ENST00000637897 IGLV10-54A0A075B6I4 117 aa5.01□□□□□ -1.61
PNKP-229ENST00000637897 A4D1N5 150 aa5.01□□□□□ -1.61
PNKP-229ENST00000637897 APOMO95445 188 aa5.01□□□□□ -1.61
PNKP-229ENST00000637897 CFC1BP0CG36 223 aa5.01□□□□□ -1.61
PNKP-229ENST00000637897 CFC1P0CG37 223 aa5.01□□□□□ -1.61
PNKP-229ENST00000637897 REG3AQ06141 175 aa5.01□□□□□ -1.61
PNKP-229ENST00000637897 CD164L2Q6UWJ8 174 aa5.01□□□□□ -1.61
PNKP-229ENST00000637897 RMI2Q96E14 147 aa5.01□□□□□ -1.61
PNKP-229ENST00000637897 NAA38Q9BRA0 125 aaKnown RBP5.01□□□□□ -1.61
PNKP-229ENST00000637897 PRO1854Q9UHT4 67 aa5.01□□□□□ -1.61
PNKP-229ENST00000637897 SPCS1Q9Y6A9 102 aa5.01□□□□□ -1.61
PNKP-229ENST00000637897 COX7A2LO14548 114 aa5□□□□□ -1.61
PNKP-229ENST00000637897 XCL1P47992 114 aa5□□□□□ -1.61
PNKP-229ENST00000637897 MEIG1Q5JSS6 88 aa5□□□□□ -1.61
PNKP-229ENST00000637897 ADAMTSL4-AS1Q5T5F5 129 aa5□□□□□ -1.61
PNKP-229ENST00000637897 C5orf38Q86SI9 138 aa5□□□□□ -1.61
PNKP-229ENST00000637897 CHCHD10Q8WYQ3 142 aaPredicted RBP5□□□□□ -1.61
PNKP-229ENST00000637897 RNF213Q63HN8 5207 aa5□□□□□ -1.61
PNKP-229ENST00000637897 TSPAN13O95857 204 aa4.99□□□□□ -1.61
PNKP-229ENST00000637897 C6orf226Q5I0X4 101 aa4.99□□□□□ -1.61
PNKP-229ENST00000637897 Q8IZM0 81 aa4.99□□□□□ -1.61
PNKP-229ENST00000637897 C15orf56Q8N910 161 aa4.99□□□□□ -1.61
PNKP-229ENST00000637897 TOMM7Q9P0U1 55 aa4.99□□□□□ -1.61
PNKP-229ENST00000637897 TRAV8-4A0A0B4J246 113 aa4.98□□□□□ -1.61
PNKP-229ENST00000637897 CRPP02741 224 aa4.98□□□□□ -1.61
PNKP-229ENST00000637897 CHTF8P0CG12 524 aa4.98□□□□□ -1.61
PNKP-229ENST00000637897 MT1HL1P0DM35 61 aa4.98□□□□□ -1.61
PNKP-229ENST00000637897 MALP21145 153 aa4.98□□□□□ -1.61
PNKP-229ENST00000637897 CXCL5P42830 114 aa4.98□□□□□ -1.61
PNKP-229ENST00000637897 CNBPP62633 177 aaKnown RBP4.98□□□□□ -1.61
PNKP-229ENST00000637897 LINC00308Q8TCZ7 52 aa4.98□□□□□ -1.61
PNKP-229ENST00000637897 ERG28Q9UKR5 140 aa4.98□□□□□ -1.61
PNKP-229ENST00000637897 TRBV20-1A0A075B6N2 111 aa4.97□□□□□ -1.61
PNKP-229ENST00000637897 PLA2G1BP04054 148 aaKnown RBP4.97□□□□□ -1.61
PNKP-229ENST00000637897 CKS1BP61024 79 aa4.97□□□□□ -1.61
PNKP-229ENST00000637897 C14orf177Q52M58 125 aa4.97□□□□□ -1.61
PNKP-229ENST00000637897 LOC107984156A0A0G2JMH3 177 aa4.96□□□□□ -1.62
PNKP-229ENST00000637897 LINC00158P58513 81 aa4.96□□□□□ -1.62
PNKP-229ENST00000637897 FOXI1Q12951 378 aa4.96□□□□□ -1.62
PNKP-229ENST00000637897 ARL17AQ8IVW1 177 aa4.96□□□□□ -1.62
PNKP-229ENST00000637897 DAND5Q8N907 189 aa4.96□□□□□ -1.62
PNKP-229ENST00000637897 TRBV30A0A0K0K1B3 111 aa4.95□□□□□ -1.62
PNKP-229ENST00000637897 GAGE12HA6NDE8 117 aa4.95□□□□□ -1.62
PNKP-229ENST00000637897 F8W1H4 67 aa4.95□□□□□ -1.62
PNKP-229ENST00000637897 EIF4EBP3O60516 100 aaPredicted RBP4.95□□□□□ -1.62
PNKP-229ENST00000637897 SCGB1C2P0DMR2 95 aa4.95□□□□□ -1.62
PNKP-229ENST00000637897 PSMB2P49721 201 aa4.95□□□□□ -1.62
PNKP-229ENST00000637897 NPC2P61916 151 aa4.95□□□□□ -1.62
PNKP-229ENST00000637897 COX17Q14061 63 aa4.95□□□□□ -1.62
PNKP-229ENST00000637897 Q1RN00 199 aa4.95□□□□□ -1.62
PNKP-229ENST00000637897 MIR7-3HGQ8N6C7 128 aa4.95□□□□□ -1.62
PNKP-229ENST00000637897 SPACA4Q8TDM5 124 aa4.95□□□□□ -1.62
PNKP-229ENST00000637897 A0A087WYN8 130 aa4.94□□□□□ -1.62
PNKP-229ENST00000637897 A0A0U1RRA0 63 aa4.94□□□□□ -1.62
PNKP-229ENST00000637897 COX6CP09669 75 aa4.94□□□□□ -1.62
PNKP-229ENST00000637897 RPL37AP61513 92 aaKnown RBP4.94□□□□□ -1.62
PNKP-229ENST00000637897 KIAA0087Q14695 138 aa4.94□□□□□ -1.62
PNKP-229ENST00000637897 HIGD2BQ4VC39 106 aa4.94□□□□□ -1.62
PNKP-229ENST00000637897 LINC00526Q96FQ7 95 aa4.94□□□□□ -1.62
PNKP-229ENST00000637897 TRAV13-2A0A0B4J235 113 aa4.93□□□□□ -1.62
PNKP-229ENST00000637897 H3BMG7 143 aa4.93□□□□□ -1.62
PNKP-229ENST00000637897 H7C2G1 150 aa4.93□□□□□ -1.62
PNKP-229ENST00000637897 RPL13AP40429 203 aaKnown RBP4.93□□□□□ -1.62
PNKP-229ENST00000637897 SPAG11BQ08648 103 aa4.93□□□□□ -1.62
PNKP-229ENST00000637897 SOSTDC1Q6X4U4 206 aa4.93□□□□□ -1.62
PNKP-229ENST00000637897 GVQW2A0A096LPI5 108 aaPredicted RBP4.92□□□□□ -1.62
PNKP-229ENST00000637897 OXTP01178 125 aa4.92□□□□□ -1.62
PNKP-229ENST00000637897 PFN2P35080 140 aa4.92□□□□□ -1.62
PNKP-229ENST00000637897 C2orf82Q6UX34 121 aa4.92□□□□□ -1.62
PNKP-229ENST00000637897 SND1-IT1Q9HBX3 110 aa4.92□□□□□ -1.62
PNKP-229ENST00000637897 PLAC8Q9NZF1 115 aa4.92□□□□□ -1.62
PNKP-229ENST00000637897 A0A096LNI7 61 aa4.91□□□□□ -1.62
PNKP-229ENST00000637897 F8WDY8 70 aa4.91□□□□□ -1.62
PNKP-229ENST00000637897 TRIAP1O43715 76 aa4.91□□□□□ -1.62
PNKP-229ENST00000637897 TCL1BO95988 128 aa4.91□□□□□ -1.62
PNKP-229ENST00000637897 ATXN8Q156A1 80 aa4.91□□□□□ -1.62
PNKP-229ENST00000637897 C21orf62-AS1Q17RA5 79 aa4.91□□□□□ -1.62
PNKP-229ENST00000637897 K7ERU9 68 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms