RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-238ENST00000635997 USP17L23D6RBM5 183 aa10.04□□□□□ -0.8
NEDD4L-238ENST00000635997 Q8IZM0 81 aa10.04□□□□□ -0.8
NEDD4L-238ENST00000635997 KRTAP10-11P60412 298 aa10.04□□□□□ -0.8
NEDD4L-238ENST00000635997 KRTAP10-3P60369 221 aa10.04□□□□□ -0.8
NEDD4L-238ENST00000635997 ADAMTSL4-AS1Q5T5F5 129 aa10.04□□□□□ -0.8
NEDD4L-238ENST00000635997 LINC00315P59091 139 aa10.02□□□□□ -0.8
NEDD4L-238ENST00000635997 IMUPQ9GZP8 106 aa10.02□□□□□ -0.8
NEDD4L-238ENST00000635997 NTM-AS1Q6ZSK4 140 aa10.02□□□□□ -0.81
NEDD4L-238ENST00000635997 LST1O00453 97 aa10.02□□□□□ -0.81
NEDD4L-238ENST00000635997 SPINK6Q6UWN8 80 aa10.01□□□□□ -0.81
NEDD4L-238ENST00000635997 AMELXQ99217 191 aa10.01□□□□□ -0.81
NEDD4L-238ENST00000635997 CCKP06307 115 aa10□□□□□ -0.81
NEDD4L-238ENST00000635997 Q8N3U1 123 aa10□□□□□ -0.81
NEDD4L-238ENST00000635997 M0R378 163 aa10□□□□□ -0.81
NEDD4L-238ENST00000635997 X6R8D5 127 aa9.99□□□□□ -0.81
NEDD4L-238ENST00000635997 STAB2Q8WWQ8 2551 aa9.99□□□□□ -0.81
NEDD4L-238ENST00000635997 TIMM17BO60830 172 aa9.99□□□□□ -0.81
NEDD4L-238ENST00000635997 TMEM258P61165 79 aa9.98□□□□□ -0.81
NEDD4L-238ENST00000635997 ZNF73O43830 326 aaPredicted RBP9.98□□□□□ -0.81
NEDD4L-238ENST00000635997 SERP2Q8N6R1 65 aa9.98□□□□□ -0.81
NEDD4L-238ENST00000635997 TRBV10-3A0A0K0K1G6 114 aa9.98□□□□□ -0.81
NEDD4L-238ENST00000635997 ESRGQ1W209 222 aa9.98□□□□□ -0.81
NEDD4L-238ENST00000635997 A8MTW9 85 aa9.98□□□□□ -0.81
NEDD4L-238ENST00000635997 BPY2O14599 106 aa9.98□□□□□ -0.81
NEDD4L-238ENST00000635997 A0A087WVE0 104 aa9.97□□□□□ -0.81
NEDD4L-238ENST00000635997 USP34Q70CQ2 3546 aa9.97□□□□□ -0.81
NEDD4L-238ENST00000635997 DMXL1Q9Y485 3027 aa9.97□□□□□ -0.81
NEDD4L-238ENST00000635997 FAM19A4Q96LR4 140 aa9.96□□□□□ -0.81
NEDD4L-238ENST00000635997 FAM240AA0A1B0GVK7 77 aa9.96□□□□□ -0.82
NEDD4L-238ENST00000635997 EGFEM1PQ0D2K5 195 aa9.96□□□□□ -0.82
NEDD4L-238ENST00000635997 IGLV9-49A0A0B4J1Y8 123 aa9.95□□□□□ -0.82
NEDD4L-238ENST00000635997 FAM236DA0A1B0GTK5 79 aa9.95□□□□□ -0.82
NEDD4L-238ENST00000635997 FAM229AH3BQW9 127 aa9.95□□□□□ -0.82
NEDD4L-238ENST00000635997 FAM236CP0DP71 79 aa9.95□□□□□ -0.82
NEDD4L-238ENST00000635997 ASH1LQ9NR48 2969 aaKnown RBP9.95□□□□□ -0.82
NEDD4L-238ENST00000635997 A0A1B0GUV1 79 aa9.95□□□□□ -0.82
NEDD4L-238ENST00000635997 MPLKIPQ8TAP9 179 aa9.94□□□□□ -0.82
NEDD4L-238ENST00000635997 Q6ZRU5 148 aa9.93□□□□□ -0.82
NEDD4L-238ENST00000635997 PLAC8L1A1L4L8 177 aa9.93□□□□□ -0.82
NEDD4L-238ENST00000635997 UTP20O75691 2785 aaKnown RBP9.93□□□□□ -0.82
NEDD4L-238ENST00000635997 ENHOQ6UWT2 76 aa9.92□□□□□ -0.82
NEDD4L-238ENST00000635997 J3QL48 77 aa9.91□□□□□ -0.82
NEDD4L-238ENST00000635997 PDE6GP18545 87 aa9.91□□□□□ -0.82
NEDD4L-238ENST00000635997 COX17Q14061 63 aa9.91□□□□□ -0.82
NEDD4L-238ENST00000635997 H3BQ85 93 aa9.9□□□□□ -0.82
NEDD4L-238ENST00000635997 C4orf26Q17RF5 130 aa9.9□□□□□ -0.82
NEDD4L-238ENST00000635997 IGHV3OR16-9A0A0B4J2B5 98 aa9.9□□□□□ -0.82
NEDD4L-238ENST00000635997 NDUFC2O95298 119 aa9.9□□□□□ -0.83
NEDD4L-238ENST00000635997 TRBV7-7A0A0K0K1E9 115 aa9.89□□□□□ -0.83
NEDD4L-238ENST00000635997 SNURFQ9Y675 71 aa9.89□□□□□ -0.83
NEDD4L-238ENST00000635997 LRBAP50851 2863 aa9.89□□□□□ -0.83
NEDD4L-238ENST00000635997 NDUFC2-KCTD14E9PQ53 114 aa9.88□□□□□ -0.83
NEDD4L-238ENST00000635997 UPK3BQ9BT76 320 aa9.88□□□□□ -0.83
NEDD4L-238ENST00000635997 V9GYY9 64 aa9.88□□□□□ -0.83
NEDD4L-238ENST00000635997 Q8NAQ8 132 aa9.87□□□□□ -0.83
NEDD4L-238ENST00000635997 NBDYA0A0U1RRE5 68 aa9.87□□□□□ -0.83
NEDD4L-238ENST00000635997 MP68P56378 58 aa9.87□□□□□ -0.83
NEDD4L-238ENST00000635997 LINC00474Q9P2X8 69 aa9.87□□□□□ -0.83
NEDD4L-238ENST00000635997 LOC400499M0QZD8 3231 aa9.85□□□□□ -0.83
NEDD4L-238ENST00000635997 KRTAP21-3Q3LHN1 58 aa9.85□□□□□ -0.83
NEDD4L-238ENST00000635997 IGKV4-1P06312 121 aa9.85□□□□□ -0.83
NEDD4L-238ENST00000635997 LINC01556Q5JQF7 62 aa9.85□□□□□ -0.83
NEDD4L-238ENST00000635997 DHRS4-AS1Q9P1J3 65 aa9.85□□□□□ -0.83
NEDD4L-238ENST00000635997 A0A087WYN8 130 aa9.84□□□□□ -0.83
NEDD4L-238ENST00000635997 C19orf73Q9NVV2 129 aa9.84□□□□□ -0.83
NEDD4L-238ENST00000635997 LINC01546A6NGU7 62 aa9.84□□□□□ -0.83
NEDD4L-238ENST00000635997 C10orf25Q5T742 122 aa9.84□□□□□ -0.83
NEDD4L-238ENST00000635997 WFDC13Q8IUB5 93 aa9.84□□□□□ -0.83
NEDD4L-238ENST00000635997 LINC00337Q8N6G1 96 aa9.84□□□□□ -0.83
NEDD4L-238ENST00000635997 PRLHP81277 87 aa9.83□□□□□ -0.84
NEDD4L-238ENST00000635997 TM2D3Q9BRN9 247 aa9.83□□□□□ -0.84
NEDD4L-238ENST00000635997 ZANQ9Y493 2812 aa9.83□□□□□ -0.84
NEDD4L-238ENST00000635997 CELSR2Q9HCU4 2923 aa9.82□□□□□ -0.84
NEDD4L-238ENST00000635997 C1orf195Q5TG92 126 aa9.81□□□□□ -0.84
NEDD4L-238ENST00000635997 KLK9Q2XQG4 91 aa9.81□□□□□ -0.84
NEDD4L-238ENST00000635997 C1orf137Q5JT78 98 aa9.8□□□□□ -0.84
NEDD4L-238ENST00000635997 RPL28P46779 137 aaKnown RBP9.8□□□□□ -0.84
NEDD4L-238ENST00000635997 Q8N814 137 aa9.79□□□□□ -0.84
NEDD4L-238ENST00000635997 REG3GQ6UW15 175 aa9.79□□□□□ -0.84
NEDD4L-238ENST00000635997 MRPL55Q7Z7F7 128 aaKnown RBP9.79□□□□□ -0.84
NEDD4L-238ENST00000635997 KMT2BQ9UMN6 2715 aaPredicted RBP9.79□□□□□ -0.84
NEDD4L-238ENST00000635997 Q6JHZ5 121 aa9.79□□□□□ -0.84
NEDD4L-238ENST00000635997 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.79□□□□□ -0.84
NEDD4L-238ENST00000635997 CRYBG3Q68DQ2 2970 aa9.78□□□□□ -0.84
NEDD4L-238ENST00000635997 CIRBP-AS1Q8TBR5 109 aa9.78□□□□□ -0.84
NEDD4L-238ENST00000635997 CRYGAP11844 174 aa9.78□□□□□ -0.84
NEDD4L-238ENST00000635997 LINC00588Q9Y4M8 146 aa9.78□□□□□ -0.84
NEDD4L-238ENST00000635997 IGLV5-39A0A0G2JS06 123 aa9.77□□□□□ -0.84
NEDD4L-238ENST00000635997 LINC00846Q9NV44 126 aa9.77□□□□□ -0.84
NEDD4L-238ENST00000635997 CR1P17927 2039 aa9.77□□□□□ -0.84
NEDD4L-238ENST00000635997 C2orf48Q96LS8 159 aa9.77□□□□□ -0.85
NEDD4L-238ENST00000635997 CASC10Q5T4H9 136 aa9.76□□□□□ -0.85
NEDD4L-238ENST00000635997 GIG44P09565 113 aaPredicted RBP9.76□□□□□ -0.85
NEDD4L-238ENST00000635997 SOSTDC1Q6X4U4 206 aa9.76□□□□□ -0.85
NEDD4L-238ENST00000635997 LINC00336Q6ZUF6 198 aa9.76□□□□□ -0.85
NEDD4L-238ENST00000635997 CSNK1G2-AS1Q8NCQ2 148 aa9.76□□□□□ -0.85
NEDD4L-238ENST00000635997 C6orf48Q9UBA6 75 aa9.76□□□□□ -0.85
NEDD4L-238ENST00000635997 C22orf24Q9Y442 160 aa9.76□□□□□ -0.85
NEDD4L-238ENST00000635997 WIPF1O43516 503 aa9.75□□□□□ -0.85
NEDD4L-238ENST00000635997 RPS28P62857 69 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms