RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 FABP9Q0Z7S8 132 aa11.31□□□□□ -0.6
TARDBP-228ENST00000629725 COX19Q49B96 90 aa11.31□□□□□ -0.6
TARDBP-228ENST00000629725 SPRR4Q96PI1 79 aa11.31□□□□□ -0.6
TARDBP-228ENST00000629725 RPL24P83731 157 aaKnown RBP11.3□□□□□ -0.6
TARDBP-228ENST00000629725 IFITM2Q01629 132 aa11.3□□□□□ -0.6
TARDBP-228ENST00000629725 Q8NBF4 154 aa11.3□□□□□ -0.6
TARDBP-228ENST00000629725 DAND5Q8N907 189 aa11.29□□□□□ -0.6
TARDBP-228ENST00000629725 SND1-IT1Q9HBX3 110 aa11.29□□□□□ -0.6
TARDBP-228ENST00000629725 SPINK1P00995 79 aa11.27□□□□□ -0.61
TARDBP-228ENST00000629725 IGLC3P0DOY3 106 aa11.27□□□□□ -0.61
TARDBP-228ENST00000629725 NDUFA6P56556 154 aa11.27□□□□□ -0.61
TARDBP-228ENST00000629725 ZNF706Q9Y5V0 76 aaPredicted RBP11.27□□□□□ -0.61
TARDBP-228ENST00000629725 IGLV5-39A0A0G2JS06 123 aa11.26□□□□□ -0.61
TARDBP-228ENST00000629725 A0A096LNJ9 63 aa11.25□□□□□ -0.61
TARDBP-228ENST00000629725 COMMD7Q86VX2 200 aa11.25□□□□□ -0.61
TARDBP-228ENST00000629725 NDUFA12Q9UI09 145 aa11.25□□□□□ -0.61
TARDBP-228ENST00000629725 ZNF22P17026 224 aaPredicted RBP11.24□□□□□ -0.61
TARDBP-228ENST00000629725 LCE2CQ5TA81 110 aa11.24□□□□□ -0.61
TARDBP-228ENST00000629725 RPS10P5Q9NQ39 176 aa11.24□□□□□ -0.61
TARDBP-228ENST00000629725 ERG28Q9UKR5 140 aa11.24□□□□□ -0.61
TARDBP-228ENST00000629725 COX17Q14061 63 aa11.23□□□□□ -0.61
TARDBP-228ENST00000629725 RHEBQ15382 184 aa11.23□□□□□ -0.61
TARDBP-228ENST00000629725 Q8NDZ9 215 aa11.23□□□□□ -0.61
TARDBP-228ENST00000629725 C10orf91Q5T1B1 145 aa11.22□□□□□ -0.61
TARDBP-228ENST00000629725 URB1-AS1Q96HZ7 61 aa11.22□□□□□ -0.61
TARDBP-228ENST00000629725 PMCHL1Q16048 86 aa11.21□□□□□ -0.61
TARDBP-228ENST00000629725 C18orf32Q8TCD1 76 aa11.21□□□□□ -0.61
TARDBP-228ENST00000629725 HBDP02042 147 aa11.2□□□□□ -0.62
TARDBP-228ENST00000629725 LINC00614P0C842 121 aa11.2□□□□□ -0.62
TARDBP-228ENST00000629725 ZNF625Q96I27 306 aaPredicted RBP11.2□□□□□ -0.62
TARDBP-228ENST00000629725 TRAPPC1Q9Y5R8 145 aa11.2□□□□□ -0.62
TARDBP-228ENST00000629725 XP32Q5T750 250 aa11.19□□□□□ -0.62
TARDBP-228ENST00000629725 FAM19A2Q8N3H0 131 aa11.19□□□□□ -0.62
TARDBP-228ENST00000629725 C11orf86A6NJI1 115 aa11.17□□□□□ -0.62
TARDBP-228ENST00000629725 BAGE3Q86Y29 109 aa11.17□□□□□ -0.62
TARDBP-228ENST00000629725 Q8N377 158 aa11.17□□□□□ -0.62
TARDBP-228ENST00000629725 CFC1BP0CG36 223 aa11.16□□□□□ -0.62
TARDBP-228ENST00000629725 MT1HP80294 61 aa11.16□□□□□ -0.62
TARDBP-228ENST00000629725 TMEM170BQ5T4T1 132 aa11.16□□□□□ -0.62
TARDBP-228ENST00000629725 RPS29P62273 56 aaKnown RBP11.15□□□□□ -0.62
TARDBP-228ENST00000629725 KRTAP19-2Q3LHN2 52 aa11.14□□□□□ -0.63
TARDBP-228ENST00000629725 SFTA2Q6UW10 78 aa11.14□□□□□ -0.63
TARDBP-228ENST00000629725 SMCR5Q8TEV8 140 aa11.14□□□□□ -0.63
TARDBP-228ENST00000629725 SLC25A20O43772 301 aa11.12□□□□□ -0.63
TARDBP-228ENST00000629725 PRYO14603 147 aa11.11□□□□□ -0.63
TARDBP-228ENST00000629725 LINC00483Q53H64 154 aa11.11□□□□□ -0.63
TARDBP-228ENST00000629725 CHTOPQ9Y3Y2 248 aaKnown RBP11.11□□□□□ -0.63
TARDBP-228ENST00000629725 IGLV9-49A0A0B4J1Y8 123 aa11.1□□□□□ -0.63
TARDBP-228ENST00000629725 LINC00158P58513 81 aa11.1□□□□□ -0.63
TARDBP-228ENST00000629725 MOBPQ13875 183 aa11.1□□□□□ -0.63
TARDBP-228ENST00000629725 A0A0U1RRA0 63 aa11.08□□□□□ -0.64
TARDBP-228ENST00000629725 APOC3P02656 99 aa11.08□□□□□ -0.64
TARDBP-228ENST00000629725 SPRR1AP35321 89 aa11.08□□□□□ -0.64
TARDBP-228ENST00000629725 GAGE2AQ6NT46 116 aa11.08□□□□□ -0.64
TARDBP-228ENST00000629725 SSBP3-AS1Q7Z2R9 100 aa11.08□□□□□ -0.64
TARDBP-228ENST00000629725 ETDCA0A1B0GVM5 59 aa11.06□□□□□ -0.64
TARDBP-228ENST00000629725 TMEM223A0PJW6 202 aa11.06□□□□□ -0.64
TARDBP-228ENST00000629725 LORP23490 312 aaPredicted RBP11.06□□□□□ -0.64
TARDBP-228ENST00000629725 KCNQ1DNQ9H478 68 aa11.06□□□□□ -0.64
TARDBP-228ENST00000629725 KRTAP4-16G5E9R7 235 aaPredicted RBP11.05□□□□□ -0.64
TARDBP-228ENST00000629725 TRAV12-1A0A0B4J245 112 aa11.04□□□□□ -0.64
TARDBP-228ENST00000629725 SNAPINO95295 136 aa11.04□□□□□ -0.64
TARDBP-228ENST00000629725 IFI27L1Q96BM0 104 aa11.04□□□□□ -0.64
TARDBP-228ENST00000629725 KRTAP10-6P60371 365 aaPredicted RBP11.03□□□□□ -0.64
TARDBP-228ENST00000629725 SVBPQ8N300 66 aa11.03□□□□□ -0.64
TARDBP-228ENST00000629725 CHCHD1Q96BP2 118 aaKnown RBP11.03□□□□□ -0.64
TARDBP-228ENST00000629725 IGLV8-61A0A075B6I0 122 aa11.02□□□□□ -0.65
TARDBP-228ENST00000629725 NCR3O14931 201 aa11.02□□□□□ -0.65
TARDBP-228ENST00000629725 ATP6V1G1O75348 118 aa11.02□□□□□ -0.65
TARDBP-228ENST00000629725 SMIM13P0DJ93 91 aa11.02□□□□□ -0.65
TARDBP-228ENST00000629725 NDUFA5Q16718 116 aa11.02□□□□□ -0.65
TARDBP-228ENST00000629725 PCOTHQ58A44 107 aa11.01□□□□□ -0.65
TARDBP-228ENST00000629725 MEIG1Q5JSS6 88 aa11.01□□□□□ -0.65
TARDBP-228ENST00000629725 BOD1L2Q8IYS8 172 aa11.01□□□□□ -0.65
TARDBP-228ENST00000629725 YPEL4Q96NS1 127 aa10.99□□□□□ -0.65
TARDBP-228ENST00000629725 ERC2-IT1O76042 136 aa10.98□□□□□ -0.65
TARDBP-228ENST00000629725 MIR7-3HGQ8N6C7 128 aa10.98□□□□□ -0.65
TARDBP-228ENST00000629725 TRBV10-3A0A0K0K1G6 114 aa10.97□□□□□ -0.65
TARDBP-228ENST00000629725 B5MCH6 92 aa10.97□□□□□ -0.65
TARDBP-228ENST00000629725 HERV-K104P63124 156 aa10.97□□□□□ -0.65
TARDBP-228ENST00000629725 S100A12P80511 92 aa10.97□□□□□ -0.65
TARDBP-228ENST00000629725 M0R2T5 61 aa10.95□□□□□ -0.66
TARDBP-228ENST00000629725 HSBP1O75506 76 aa10.95□□□□□ -0.66
TARDBP-228ENST00000629725 C9orf153Q5TBE3 101 aa10.94□□□□□ -0.66
TARDBP-228ENST00000629725 MYMXA0A1B0GTQ4 84 aa10.93□□□□□ -0.66
TARDBP-228ENST00000629725 LINC00587B1AMM8 73 aa10.93□□□□□ -0.66
TARDBP-228ENST00000629725 H0Y8G0 127 aa10.93□□□□□ -0.66
TARDBP-228ENST00000629725 Q9BRP9 147 aa10.93□□□□□ -0.66
TARDBP-228ENST00000629725 MAP1LC3CQ9BXW4 147 aa10.92□□□□□ -0.66
TARDBP-228ENST00000629725 C9orf92A6NGG3 77 aa10.9□□□□□ -0.66
TARDBP-228ENST00000629725 FLGP20930 4061 aaPredicted RBP10.89□□□□□ -0.67
TARDBP-228ENST00000629725 TSPEAR-AS2P59090 65 aa10.89□□□□□ -0.67
TARDBP-228ENST00000629725 Q6ZRX8 168 aa10.89□□□□□ -0.67
TARDBP-228ENST00000629725 LEPROTO15243 131 aa10.87□□□□□ -0.67
TARDBP-228ENST00000629725 DDTP30046 118 aa10.87□□□□□ -0.67
TARDBP-228ENST00000629725 LEPROTL1O95214 131 aa10.86□□□□□ -0.67
TARDBP-228ENST00000629725 KRTAP9-7A8MTY7 169 aa10.85□□□□□ -0.67
TARDBP-228ENST00000629725 SERF1AO75920 110 aa10.85□□□□□ -0.67
TARDBP-228ENST00000629725 TRGC2P03986 189 aa10.85□□□□□ -0.67
TARDBP-228ENST00000629725 LIMD2Q9BT23 127 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms