RNA–Protein interactions for RNA: ENST00000629104.1

CHD2-216, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-216ENST00000629104 LRP1Q07954 4544 aaKnown RBP5.48□□□□□ -1.53
CHD2-216ENST00000629104 KRTDAPP60985 99 aa5.48□□□□□ -1.53
CHD2-216ENST00000629104 HERV-K104P63124 156 aa5.48□□□□□ -1.53
CHD2-216ENST00000629104 KRTAP11-1Q8IUC1 163 aa5.48□□□□□ -1.53
CHD2-216ENST00000629104 PLEKHB2Q96CS7 222 aa5.48□□□□□ -1.53
CHD2-216ENST00000629104 SND1-IT1Q9HBX3 110 aa5.48□□□□□ -1.53
CHD2-216ENST00000629104 NDUFA12Q9UI09 145 aa5.48□□□□□ -1.53
CHD2-216ENST00000629104 PLA2G2DQ9UNK4 145 aa5.48□□□□□ -1.53
CHD2-216ENST00000629104 MYMXA0A1B0GTQ4 84 aa5.47□□□□□ -1.53
CHD2-216ENST00000629104 E9PLD3 99 aa5.47□□□□□ -1.53
CHD2-216ENST00000629104 J3QQQ9 107 aa5.47□□□□□ -1.53
CHD2-216ENST00000629104 LINC00158P58513 81 aa5.47□□□□□ -1.53
CHD2-216ENST00000629104 UBE2BP63146 152 aa5.47□□□□□ -1.53
CHD2-216ENST00000629104 MEIG1Q5JSS6 88 aa5.47□□□□□ -1.53
CHD2-216ENST00000629104 TP73-AS1Q9UF72 201 aa5.47□□□□□ -1.53
CHD2-216ENST00000629104 IGLV5-37A0A075B6J1 123 aa5.46□□□□□ -1.54
CHD2-216ENST00000629104 A0A0U1RRA0 63 aa5.46□□□□□ -1.54
CHD2-216ENST00000629104 S100A6P06703 90 aa5.46□□□□□ -1.54
CHD2-216ENST00000629104 SMIM13P0DJ93 91 aa5.46□□□□□ -1.54
CHD2-216ENST00000629104 LGALS3P17931 250 aaKnown RBP5.46□□□□□ -1.54
CHD2-216ENST00000629104 NMUP48645 174 aa5.46□□□□□ -1.54
CHD2-216ENST00000629104 LBHQ53QV2 105 aaPredicted RBP5.46□□□□□ -1.54
CHD2-216ENST00000629104 C1orf137Q5JT78 98 aa5.46□□□□□ -1.54
CHD2-216ENST00000629104 MRPL55Q7Z7F7 128 aaKnown RBP5.46□□□□□ -1.54
CHD2-216ENST00000629104 HIST3H2BBQ8N257 126 aa5.46□□□□□ -1.54
CHD2-216ENST00000629104 C20orf202A1L168 122 aa5.45□□□□□ -1.54
CHD2-216ENST00000629104 KRTAP29-1A8MX34 341 aaPredicted RBP5.45□□□□□ -1.54
CHD2-216ENST00000629104 LINC00587B1AMM8 73 aa5.45□□□□□ -1.54
CHD2-216ENST00000629104 S100A2P29034 98 aa5.45□□□□□ -1.54
CHD2-216ENST00000629104 SRSF9Q13242 221 aaKnown RBP eCLIP5.45□□□□□ -1.54
CHD2-216ENST00000629104 NKAPP1Q8N9T2 125 aa5.45□□□□□ -1.54
CHD2-216ENST00000629104 HIST1H2BLQ99880 126 aa5.45□□□□□ -1.54
CHD2-216ENST00000629104 IGLV7-43P04211 117 aa5.44□□□□□ -1.54
CHD2-216ENST00000629104 VPREB1P12018 145 aa5.44□□□□□ -1.54
CHD2-216ENST00000629104 RPL24P83731 157 aaKnown RBP5.44□□□□□ -1.54
CHD2-216ENST00000629104 SPINK6Q6UWN8 80 aa5.44□□□□□ -1.54
CHD2-216ENST00000629104 MIR7-3HGQ8N6C7 128 aa5.44□□□□□ -1.54
CHD2-216ENST00000629104 Q8NDZ9 215 aa5.44□□□□□ -1.54
CHD2-216ENST00000629104 LINC00167Q96N53 147 aa5.44□□□□□ -1.54
CHD2-216ENST00000629104 GAGE10A6NGK3 116 aa5.43□□□□□ -1.54
CHD2-216ENST00000629104 OXTP01178 125 aa5.43□□□□□ -1.54
CHD2-216ENST00000629104 IGKV2D-26A0A0A0MRZ7 120 aa5.42□□□□□ -1.54
CHD2-216ENST00000629104 A0A0J9YXY3 114 aa5.42□□□□□ -1.54
CHD2-216ENST00000629104 RPL37AP8A6NKH3 93 aa5.42□□□□□ -1.54
CHD2-216ENST00000629104 AKR1D1P51857 326 aa5.42□□□□□ -1.54
CHD2-216ENST00000629104 SNRPEP62304 92 aaKnown RBP5.42□□□□□ -1.54
CHD2-216ENST00000629104 TNXBP22105 4242 aa5.42□□□□□ -1.54
CHD2-216ENST00000629104 HERC1Q15751 4861 aa5.42□□□□□ -1.54
CHD2-216ENST00000629104 C5orf52A6NGY3 159 aa5.41□□□□□ -1.54
CHD2-216ENST00000629104 BOD1L2Q8IYS8 172 aa5.41□□□□□ -1.54
CHD2-216ENST00000629104 ATOH7Q8N100 152 aa5.41□□□□□ -1.54
CHD2-216ENST00000629104 DAND5Q8N907 189 aa5.41□□□□□ -1.54
CHD2-216ENST00000629104 IGLV1-50A0A075B6I6 118 aa5.4□□□□□ -1.54
CHD2-216ENST00000629104 IGKV2-28A0A075B6P5 120 aa5.4□□□□□ -1.54
CHD2-216ENST00000629104 LOC107984156A0A0G2JMH3 177 aa5.4□□□□□ -1.54
CHD2-216ENST00000629104 ZNF815PA8K554 130 aa5.4□□□□□ -1.54
CHD2-216ENST00000629104 EIF4EBP3O60516 100 aaPredicted RBP5.4□□□□□ -1.54
CHD2-216ENST00000629104 IGKV2D-28P01615 120 aa5.4□□□□□ -1.54
CHD2-216ENST00000629104 ANKRD39Q53RE8 183 aa5.4□□□□□ -1.54
CHD2-216ENST00000629104 REG3GQ6UW15 175 aa5.4□□□□□ -1.54
CHD2-216ENST00000629104 ARL17AQ8IVW1 177 aa5.4□□□□□ -1.54
CHD2-216ENST00000629104 TTTY13Q9BZ97 58 aa5.4□□□□□ -1.54
CHD2-216ENST00000629104 TMEM238LA0A1B0GVL6 79 aa5.39□□□□□ -1.55
CHD2-216ENST00000629104 M0R378 163 aa5.39□□□□□ -1.55
CHD2-216ENST00000629104 BCE1O60756 84 aa5.39□□□□□ -1.55
CHD2-216ENST00000629104 ADAMTSL4-AS1Q5T5F5 129 aa5.39□□□□□ -1.55
CHD2-216ENST00000629104 DIRC1Q969H9 104 aa5.39□□□□□ -1.55
CHD2-216ENST00000629104 DMBT1Q9UGM3 2413 aaPredicted RBP5.38□□□□□ -1.55
CHD2-216ENST00000629104 H0Y9J4 135 aa5.38□□□□□ -1.55
CHD2-216ENST00000629104 NCR3O14931 201 aa5.38□□□□□ -1.55
CHD2-216ENST00000629104 ZNF861PO60384 105 aa5.38□□□□□ -1.55
CHD2-216ENST00000629104 TIMM17BO60830 172 aa5.38□□□□□ -1.55
CHD2-216ENST00000629104 LINC01600Q96MT4 127 aa5.38□□□□□ -1.55
CHD2-216ENST00000629104 LITAFQ99732 161 aa5.38□□□□□ -1.55
CHD2-216ENST00000629104 MIEN1Q9BRT3 115 aa5.38□□□□□ -1.55
CHD2-216ENST00000629104 TMEM238C9JI98 176 aa5.37□□□□□ -1.55
CHD2-216ENST00000629104 MT1HL1P0DM35 61 aa5.37□□□□□ -1.55
CHD2-216ENST00000629104 NPC2P61916 151 aa5.37□□□□□ -1.55
CHD2-216ENST00000629104 SOSTDC1Q6X4U4 206 aa5.37□□□□□ -1.55
CHD2-216ENST00000629104 TMEM126AQ9H061 195 aa5.37□□□□□ -1.55
CHD2-216ENST00000629104 NDUFC2O95298 119 aa5.36□□□□□ -1.55
CHD2-216ENST00000629104 RPL28P46779 137 aaKnown RBP5.36□□□□□ -1.55
CHD2-216ENST00000629104 KRTAP13-1Q8IUC0 172 aa5.36□□□□□ -1.55
CHD2-216ENST00000629104 TRBV10-2A0A0K0K1G8 114 aa5.35□□□□□ -1.55
CHD2-216ENST00000629104 SCGB1D1O95968 90 aa5.35□□□□□ -1.55
CHD2-216ENST00000629104 UBE2AP49459 152 aa5.35□□□□□ -1.55
CHD2-216ENST00000629104 SCGB1D4Q6XE38 83 aa5.35□□□□□ -1.55
CHD2-216ENST00000629104 PCP2Q8IVA1 136 aa5.35□□□□□ -1.55
CHD2-216ENST00000629104 LINC00308Q8TCZ7 52 aa5.35□□□□□ -1.55
CHD2-216ENST00000629104 SPANXB1Q9NS25 103 aaPredicted RBP5.35□□□□□ -1.55
CHD2-216ENST00000629104 TRBV10-3A0A0K0K1G6 114 aa5.34□□□□□ -1.55
CHD2-216ENST00000629104 HSBP1L1C9JCN9 74 aa5.34□□□□□ -1.55
CHD2-216ENST00000629104 PRYO14603 147 aa5.34□□□□□ -1.55
CHD2-216ENST00000629104 KRTAP1-4P0C5Y4 121 aa5.34□□□□□ -1.55
CHD2-216ENST00000629104 FAM19A1Q7Z5A9 133 aa5.34□□□□□ -1.55
CHD2-216ENST00000629104 SPANXDQ9BXN6 97 aa5.34□□□□□ -1.55
CHD2-216ENST00000629104 KCNQ1DNQ9H478 68 aa5.34□□□□□ -1.55
CHD2-216ENST00000629104 SPANXCQ9NY87 97 aa5.34□□□□□ -1.55
CHD2-216ENST00000629104 DDTP30046 118 aa5.33□□□□□ -1.56
CHD2-216ENST00000629104 SPRR1AP35321 89 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms