RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 SMIM26A0A096LP01 95 aa6.05□□□□□ -1.44
VCL-207ENST00000624354 ORMDL1Q9P0S3 153 aa6.05□□□□□ -1.44
VCL-207ENST00000624354 IGLV1-51P01701 117 aa6.05□□□□□ -1.44
VCL-207ENST00000624354 C19orf73Q9NVV2 129 aa6.05□□□□□ -1.44
VCL-207ENST00000624354 H7BZZ5 65 aa6.04□□□□□ -1.44
VCL-207ENST00000624354 ESM1Q9NQ30 184 aa6.04□□□□□ -1.44
VCL-207ENST00000624354 SS18Q15532 418 aa6.04□□□□□ -1.44
VCL-207ENST00000624354 DEFB130BP0DP73 79 aa6.04□□□□□ -1.44
VCL-207ENST00000624354 DEFB130AP0DP74 79 aa6.04□□□□□ -1.44
VCL-207ENST00000624354 LY6G6DO95868 133 aa6.03□□□□□ -1.44
VCL-207ENST00000624354 LINC01006Q8NI28 216 aa6.03□□□□□ -1.44
VCL-207ENST00000624354 TRAV7A0A075B6U4 112 aa6.03□□□□□ -1.44
VCL-207ENST00000624354 UBL5Q9BZL1 73 aa6.03□□□□□ -1.44
VCL-207ENST00000624354 ANK3Q12955 4377 aaKnown RBP6.03□□□□□ -1.44
VCL-207ENST00000624354 TRBV10-3A0A0K0K1G6 114 aa6.02□□□□□ -1.45
VCL-207ENST00000624354 JMJD7-PLA2G4BH0Y9G9 81 aa6.02□□□□□ -1.45
VCL-207ENST00000624354 Q8IZM0 81 aa6.02□□□□□ -1.45
VCL-207ENST00000624354 GYPEP15421 78 aa6.02□□□□□ -1.45
VCL-207ENST00000624354 C16orf95Q9H693 158 aa6.02□□□□□ -1.45
VCL-207ENST00000624354 A0A1B0GUV1 79 aa6.01□□□□□ -1.45
VCL-207ENST00000624354 LYPD5Q6UWN5 251 aa6.01□□□□□ -1.45
VCL-207ENST00000624354 FP248Q71RG6 208 aaPredicted RBP6.01□□□□□ -1.45
VCL-207ENST00000624354 CLPSL2Q6UWE3 100 aa6.01□□□□□ -1.45
VCL-207ENST00000624354 BCE1O60756 84 aa6□□□□□ -1.45
VCL-207ENST00000624354 RBM3P98179 157 aaKnown RBP6□□□□□ -1.45
VCL-207ENST00000624354 BRK1Q8WUW1 75 aa6□□□□□ -1.45
VCL-207ENST00000624354 SNURFQ9Y675 71 aa6□□□□□ -1.45
VCL-207ENST00000624354 V9GYY9 64 aa6□□□□□ -1.45
VCL-207ENST00000624354 KLKP1Q107X0 134 aa6□□□□□ -1.45
VCL-207ENST00000624354 F8WEM9 126 aa5.99□□□□□ -1.45
VCL-207ENST00000624354 SEC61GP60059 68 aa5.99□□□□□ -1.45
VCL-207ENST00000624354 C1orf195Q5TG92 126 aa5.99□□□□□ -1.45
VCL-207ENST00000624354 A0A0U1RQV1 116 aa5.99□□□□□ -1.45
VCL-207ENST00000624354 RMI2Q96E14 147 aa5.99□□□□□ -1.45
VCL-207ENST00000624354 PRO0255Q9UI72 69 aa5.99□□□□□ -1.45
VCL-207ENST00000624354 A0A096LPF7 62 aa5.98□□□□□ -1.45
VCL-207ENST00000624354 TMEM256-PLSCR3K7ERE1 68 aa5.98□□□□□ -1.45
VCL-207ENST00000624354 PRR3P79522 188 aaKnown RBP5.98□□□□□ -1.45
VCL-207ENST00000624354 LINC00612Q8N6U2 182 aa5.98□□□□□ -1.45
VCL-207ENST00000624354 Q8N814 137 aa5.98□□□□□ -1.45
VCL-207ENST00000624354 LINC00167Q96N53 147 aa5.98□□□□□ -1.45
VCL-207ENST00000624354 TRBV7-6A0A0J9YX20 115 aa5.98□□□□□ -1.45
VCL-207ENST00000624354 COX17Q14061 63 aa5.98□□□□□ -1.45
VCL-207ENST00000624354 LINC00474Q9P2X8 69 aa5.98□□□□□ -1.45
VCL-207ENST00000624354 NANOS2P60321 138 aaKnown RBP5.97□□□□□ -1.45
VCL-207ENST00000624354 KRTAP1-1Q07627 177 aa5.97□□□□□ -1.45
VCL-207ENST00000624354 CD164L2Q6UWJ8 174 aa5.97□□□□□ -1.45
VCL-207ENST00000624354 LINC00269Q8N2A0 174 aa5.97□□□□□ -1.45
VCL-207ENST00000624354 TRAV10A0A0B4J240 114 aa5.96□□□□□ -1.46
VCL-207ENST00000624354 KIAA0087Q14695 138 aa5.96□□□□□ -1.46
VCL-207ENST00000624354 CHCHD10Q8WYQ3 142 aaPredicted RBP5.96□□□□□ -1.46
VCL-207ENST00000624354 NDUFC1O43677 76 aa5.96□□□□□ -1.46
VCL-207ENST00000624354 HAMPP81172 84 aa5.96□□□□□ -1.46
VCL-207ENST00000624354 IGLV10-54A0A075B6I4 117 aa5.95□□□□□ -1.46
VCL-207ENST00000624354 ANGP03950 147 aaKnown RBP5.95□□□□□ -1.46
VCL-207ENST00000624354 ATP5EP56381 51 aaPredicted RBP5.95□□□□□ -1.46
VCL-207ENST00000624354 C6orf99Q4VX62 202 aa5.95□□□□□ -1.46
VCL-207ENST00000624354 LINC00482Q8N8I6 264 aa5.95□□□□□ -1.46
VCL-207ENST00000624354 X6R8D5 127 aa5.95□□□□□ -1.46
VCL-207ENST00000624354 IGHV4-28A0A0C4DH34 117 aa5.94□□□□□ -1.46
VCL-207ENST00000624354 REG3AQ06141 175 aa5.94□□□□□ -1.46
VCL-207ENST00000624354 LINC01547P58512 204 aaPredicted RBP5.94□□□□□ -1.46
VCL-207ENST00000624354 C9orf116Q5BN46 136 aaPredicted RBP5.94□□□□□ -1.46
VCL-207ENST00000624354 LYRM9A8MSI8 78 aa5.93□□□□□ -1.46
VCL-207ENST00000624354 LINC00575Q6W349 94 aa5.92□□□□□ -1.46
VCL-207ENST00000624354 MIFP14174 115 aa5.92□□□□□ -1.46
VCL-207ENST00000624354 MPLKIPQ8TAP9 179 aa5.92□□□□□ -1.46
VCL-207ENST00000624354 Q6ZQT0 140 aa5.91□□□□□ -1.46
VCL-207ENST00000624354 Q8N3U1 123 aa5.91□□□□□ -1.46
VCL-207ENST00000624354 Q6ZVQ6 151 aa5.91□□□□□ -1.46
VCL-207ENST00000624354 MUC7Q8TAX7 377 aa5.91□□□□□ -1.46
VCL-207ENST00000624354 SPAG11BQ08648 103 aa5.91□□□□□ -1.46
VCL-207ENST00000624354 Q8NDZ9 215 aa5.91□□□□□ -1.46
VCL-207ENST00000624354 SPATA3Q8NHX4 192 aa5.91□□□□□ -1.46
VCL-207ENST00000624354 LAMTOR3Q9UHA4 124 aa5.91□□□□□ -1.46
VCL-207ENST00000624354 DEFB4AO15263 64 aa5.9□□□□□ -1.46
VCL-207ENST00000624354 DAD1P61803 113 aa5.9□□□□□ -1.46
VCL-207ENST00000624354 TM2D3Q9BRN9 247 aa5.9□□□□□ -1.46
VCL-207ENST00000624354 UNQ6190/PRO20217Q6UXQ8 127 aa5.9□□□□□ -1.47
VCL-207ENST00000624354 ZNF561-AS1K7EIQ3 104 aa5.89□□□□□ -1.47
VCL-207ENST00000624354 LOC110117498A0A087WWA1 95 aa5.89□□□□□ -1.47
VCL-207ENST00000624354 CXCL6P80162 114 aa5.89□□□□□ -1.47
VCL-207ENST00000624354 DEFB135Q30KP9 77 aa5.89□□□□□ -1.47
VCL-207ENST00000624354 C10orf25Q5T742 122 aa5.89□□□□□ -1.47
VCL-207ENST00000624354 C6orf223Q8N319 242 aa5.89□□□□□ -1.47
VCL-207ENST00000624354 TRBV7-4A0A0J9YYF1 115 aa5.89□□□□□ -1.47
VCL-207ENST00000624354 M0R2N4 97 aa5.88□□□□□ -1.47
VCL-207ENST00000624354 A0A0J9YWU9 116 aa5.88□□□□□ -1.47
VCL-207ENST00000624354 PRB2P02812 416 aaPredicted RBP5.88□□□□□ -1.47
VCL-207ENST00000624354 IGHV4-30-4P0DP06 118 aa5.88□□□□□ -1.47
VCL-207ENST00000624354 FAM229BQ4G0N7 80 aa5.88□□□□□ -1.47
VCL-207ENST00000624354 NREPQ16612 68 aa5.87□□□□□ -1.47
VCL-207ENST00000624354 TMEM254Q8TBM7 123 aa5.87□□□□□ -1.47
VCL-207ENST00000624354 IGLV6-57P01721 117 aa5.87□□□□□ -1.47
VCL-207ENST00000624354 KRTAP10-3P60369 221 aa5.87□□□□□ -1.47
VCL-207ENST00000624354 APOC4P55056 127 aa5.87□□□□□ -1.47
VCL-207ENST00000624354 LELP1Q5T871 98 aa5.87□□□□□ -1.47
VCL-207ENST00000624354 Q6ZQY7 126 aa5.87□□□□□ -1.47
VCL-207ENST00000624354 H3BQ85 93 aa5.86□□□□□ -1.47
VCL-207ENST00000624354 SCXQ7RTU7 201 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms