RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 TP53AIP1Q9HCN2 124 aa6.92□□□□□ -1.3
COL4A6-210ENST00000621266 JMJD1CQ15652 2540 aa6.92□□□□□ -1.3
COL4A6-210ENST00000621266 WDR87Q6ZQQ6 2873 aa6.91□□□□□ -1.3
COL4A6-210ENST00000621266 NHLRC4P0CG21 123 aaPredicted RBP6.91□□□□□ -1.3
COL4A6-210ENST00000621266 RPL37AP61513 92 aaKnown RBP6.91□□□□□ -1.3
COL4A6-210ENST00000621266 ANKRD11Q6UB99 2663 aaPredicted RBP6.91□□□□□ -1.3
COL4A6-210ENST00000621266 C1orf134Q5TEV5 83 aa6.9□□□□□ -1.3
COL4A6-210ENST00000621266 C16orf95Q9H693 158 aa6.9□□□□□ -1.3
COL4A6-210ENST00000621266 C22orf24Q9Y442 160 aa6.9□□□□□ -1.3
COL4A6-210ENST00000621266 COX8CQ7Z4L0 72 aa6.89□□□□□ -1.31
COL4A6-210ENST00000621266 IGLV1-51P01701 117 aa6.88□□□□□ -1.31
COL4A6-210ENST00000621266 COA5Q86WW8 74 aa6.88□□□□□ -1.31
COL4A6-210ENST00000621266 ABCA12Q86UK0 2595 aa6.88□□□□□ -1.31
COL4A6-210ENST00000621266 KRTAP24-1Q3LI83 254 aa6.88□□□□□ -1.31
COL4A6-210ENST00000621266 UTRNP46939 3433 aa6.88□□□□□ -1.31
COL4A6-210ENST00000621266 USP9XQ93008 2570 aaPredicted RBP6.88□□□□□ -1.31
COL4A6-210ENST00000621266 MUC4Q99102 2169 aa6.88□□□□□ -1.31
COL4A6-210ENST00000621266 TRAV22A0A0B4J277 110 aa6.87□□□□□ -1.31
COL4A6-210ENST00000621266 A0A1B0GUV1 79 aa6.87□□□□□ -1.31
COL4A6-210ENST00000621266 LINC01546A6NGU7 62 aa6.87□□□□□ -1.31
COL4A6-210ENST00000621266 IGLV5-39A0A0G2JS06 123 aa6.87□□□□□ -1.31
COL4A6-210ENST00000621266 C11orf72Q8NBR9 251 aa6.87□□□□□ -1.31
COL4A6-210ENST00000621266 LINC01600Q96MT4 127 aa6.87□□□□□ -1.31
COL4A6-210ENST00000621266 ZFYVE26Q68DK2 2539 aa6.87□□□□□ -1.31
COL4A6-210ENST00000621266 TLN2Q9Y4G6 2542 aa6.87□□□□□ -1.31
COL4A6-210ENST00000621266 H3BPC8 53 aa6.86□□□□□ -1.31
COL4A6-210ENST00000621266 KTN1-AS1Q86SY8 53 aa6.86□□□□□ -1.31
COL4A6-210ENST00000621266 DOPEY1Q5JWR5 2465 aa6.86□□□□□ -1.31
COL4A6-210ENST00000621266 F8WDY8 70 aa6.86□□□□□ -1.31
COL4A6-210ENST00000621266 PTPRBP23467 1997 aa6.86□□□□□ -1.31
COL4A6-210ENST00000621266 MOBPQ13875 183 aa6.86□□□□□ -1.31
COL4A6-210ENST00000621266 CYP4F30PQ9H0H9 118 aa6.86□□□□□ -1.31
COL4A6-210ENST00000621266 LOC110117498A0A087WWA1 95 aa6.85□□□□□ -1.31
COL4A6-210ENST00000621266 LYPD5Q6UWN5 251 aa6.85□□□□□ -1.31
COL4A6-210ENST00000621266 SPACA4Q8TDM5 124 aa6.85□□□□□ -1.31
COL4A6-210ENST00000621266 COL4A2P08572 1712 aa6.84□□□□□ -1.31
COL4A6-210ENST00000621266 CHD8Q9HCK8 2581 aa6.84□□□□□ -1.31
COL4A6-210ENST00000621266 LCA10Q71F78 164 aa6.84□□□□□ -1.31
COL4A6-210ENST00000621266 LINC00476Q8WZB0 136 aa6.83□□□□□ -1.32
COL4A6-210ENST00000621266 FHL3Q13643 280 aa6.83□□□□□ -1.32
COL4A6-210ENST00000621266 ELOF1P60002 83 aaKnown RBP6.83□□□□□ -1.32
COL4A6-210ENST00000621266 KIF25-AS1Q9Y6Z4 181 aa6.83□□□□□ -1.32
COL4A6-210ENST00000621266 TET2Q6N021 2002 aaPredicted RBP6.82□□□□□ -1.32
COL4A6-210ENST00000621266 LINC00167Q96N53 147 aa6.82□□□□□ -1.32
COL4A6-210ENST00000621266 USP9YO00507 2555 aaPredicted RBP6.82□□□□□ -1.32
COL4A6-210ENST00000621266 UQCR11O14957 56 aa6.82□□□□□ -1.32
COL4A6-210ENST00000621266 MIR22HGQ0VDD5 57 aa6.81□□□□□ -1.32
COL4A6-210ENST00000621266 SPTBN4Q9H254 2564 aa6.81□□□□□ -1.32
COL4A6-210ENST00000621266 LOC101927531A0A1B0GV80 90 aa6.81□□□□□ -1.32
COL4A6-210ENST00000621266 ST20-AS1Q8NBB2 130 aa6.81□□□□□ -1.32
COL4A6-210ENST00000621266 TRBV7-4A0A0J9YYF1 115 aa6.81□□□□□ -1.32
COL4A6-210ENST00000621266 Q8NBF4 154 aa6.81□□□□□ -1.32
COL4A6-210ENST00000621266 APLNQ9ULZ1 77 aa6.81□□□□□ -1.32
COL4A6-210ENST00000621266 CRIPTQ9P021 101 aa6.8□□□□□ -1.32
COL4A6-210ENST00000621266 LINC00313P59037 77 aa6.8□□□□□ -1.32
COL4A6-210ENST00000621266 IGHV3OR16-9A0A0B4J2B5 98 aa6.8□□□□□ -1.32
COL4A6-210ENST00000621266 K7EQZ3 153 aa6.8□□□□□ -1.32
COL4A6-210ENST00000621266 FN1P02751 2386 aaKnown RBP6.79□□□□□ -1.32
COL4A6-210ENST00000621266 ZNF462Q96JM2 2506 aa6.78□□□□□ -1.32
COL4A6-210ENST00000621266 SETD2Q9BYW2 2564 aaPredicted RBP6.77□□□□□ -1.32
COL4A6-210ENST00000621266 LRRK2Q5S007 2527 aa6.77□□□□□ -1.33
COL4A6-210ENST00000621266 ERC2-IT1O76042 136 aa6.76□□□□□ -1.33
COL4A6-210ENST00000621266 A0A1B0GW54 56 aa6.76□□□□□ -1.33
COL4A6-210ENST00000621266 LINC00315P59091 139 aa6.76□□□□□ -1.33
COL4A6-210ENST00000621266 Q6ZRX8 168 aa6.75□□□□□ -1.33
COL4A6-210ENST00000621266 IGLV5-45A0A087WSX0 123 aa6.75□□□□□ -1.33
COL4A6-210ENST00000621266 PHF5AQ7RTV0 110 aaKnown RBP6.74□□□□□ -1.33
COL4A6-210ENST00000621266 CHTF8P0CG12 524 aa6.74□□□□□ -1.33
COL4A6-210ENST00000621266 CENPFP49454 3210 aa6.74□□□□□ -1.33
COL4A6-210ENST00000621266 H7BZZ5 65 aa6.73□□□□□ -1.33
COL4A6-210ENST00000621266 Q96NJ1 140 aa6.73□□□□□ -1.33
COL4A6-210ENST00000621266 KLKP1Q107X0 134 aa6.72□□□□□ -1.33
COL4A6-210ENST00000621266 A8MWP4 228 aa6.72□□□□□ -1.33
COL4A6-210ENST00000621266 FASNP49327 2511 aaKnown RBP6.72□□□□□ -1.33
COL4A6-210ENST00000621266 H3BS24 57 aa6.72□□□□□ -1.33
COL4A6-210ENST00000621266 COL27A1Q8IZC6 1860 aaPredicted RBP6.71□□□□□ -1.33
COL4A6-210ENST00000621266 C16orf90A8MZG2 172 aa6.71□□□□□ -1.33
COL4A6-210ENST00000621266 EPM2AB3EWF7 344 aa6.71□□□□□ -1.33
COL4A6-210ENST00000621266 LITAFQ99732 161 aa6.71□□□□□ -1.33
COL4A6-210ENST00000621266 PRR15Q8IV56 129 aa6.71□□□□□ -1.34
COL4A6-210ENST00000621266 J3QL48 77 aa6.7□□□□□ -1.34
COL4A6-210ENST00000621266 C9orf129Q5T035 196 aaKnown RBP6.7□□□□□ -1.34
COL4A6-210ENST00000621266 MRPL34Q9BQ48 92 aaKnown RBP6.7□□□□□ -1.34
COL4A6-210ENST00000621266 FAM229AH3BQW9 127 aa6.69□□□□□ -1.34
COL4A6-210ENST00000621266 MTORP42345 2549 aa6.69□□□□□ -1.34
COL4A6-210ENST00000621266 WWC2-AS2Q96NR7 200 aa6.69□□□□□ -1.34
COL4A6-210ENST00000621266 PKD1L2Q7Z442 2459 aa6.68□□□□□ -1.34
COL4A6-210ENST00000621266 IGLV6-57P01721 117 aa6.66□□□□□ -1.34
COL4A6-210ENST00000621266 RBM12B-AS1Q9P1G2 102 aa6.66□□□□□ -1.34
COL4A6-210ENST00000621266 CDC42SE1Q9NRR8 79 aa6.65□□□□□ -1.34
COL4A6-210ENST00000621266 PCSK5Q92824 1860 aa6.65□□□□□ -1.34
COL4A6-210ENST00000621266 FAM168BA1KXE4 195 aa6.65□□□□□ -1.35
COL4A6-210ENST00000621266 LINC01554Q52M75 96 aa6.65□□□□□ -1.35
COL4A6-210ENST00000621266 DSCR10P59022 87 aa6.64□□□□□ -1.35
COL4A6-210ENST00000621266 POLQO75417 2590 aa6.64□□□□□ -1.35
COL4A6-210ENST00000621266 A0A0D9SG42 100 aa6.64□□□□□ -1.35
COL4A6-210ENST00000621266 TYMSOSQ8TAI1 123 aa6.63□□□□□ -1.35
COL4A6-210ENST00000621266 Q6ZRP5 223 aa6.63□□□□□ -1.35
COL4A6-210ENST00000621266 EIF4EBP3O60516 100 aaPredicted RBP6.62□□□□□ -1.35
COL4A6-210ENST00000621266 A0A0G2JQZ4 141 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms