RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 NBPF19A0A087WUL8 3843 aa6.47□□□□□ -1.37
GGA3-222ENST00000621217 SMIM11BQ8TCY0 68 aa6.47□□□□□ -1.37
GGA3-222ENST00000621217 LINC00242Q5T6M2 205 aa6.47□□□□□ -1.37
GGA3-222ENST00000621217 Q8N2B8 174 aa6.47□□□□□ -1.37
GGA3-222ENST00000621217 COX7BP24311 80 aa6.46□□□□□ -1.38
GGA3-222ENST00000621217 LINC00269Q8N2A0 174 aa6.46□□□□□ -1.38
GGA3-222ENST00000621217 IGLV4-60A0A075B6I1 120 aa6.45□□□□□ -1.38
GGA3-222ENST00000621217 C11orf72Q8NBR9 251 aa6.45□□□□□ -1.38
GGA3-222ENST00000621217 PSCAO43653 123 aa6.45□□□□□ -1.38
GGA3-222ENST00000621217 NHLRC4P0CG21 123 aaPredicted RBP6.45□□□□□ -1.38
GGA3-222ENST00000621217 RPL28P46779 137 aaKnown RBP6.45□□□□□ -1.38
GGA3-222ENST00000621217 C6orf99Q4VX62 202 aa6.45□□□□□ -1.38
GGA3-222ENST00000621217 KIR2DL5BQ8NHK3 375 aa6.45□□□□□ -1.38
GGA3-222ENST00000621217 ZFHX3Q15911 3703 aa6.45□□□□□ -1.38
GGA3-222ENST00000621217 ETDCA0A1B0GVM5 59 aa6.44□□□□□ -1.38
GGA3-222ENST00000621217 A6NED7 52 aa6.44□□□□□ -1.38
GGA3-222ENST00000621217 KRTAP1-1Q07627 177 aa6.44□□□□□ -1.38
GGA3-222ENST00000621217 C16orf95Q9H693 158 aa6.44□□□□□ -1.38
GGA3-222ENST00000621217 TRBV6-8A0A0A6YYG3 113 aa6.44□□□□□ -1.38
GGA3-222ENST00000621217 CHKB-CPT1BH3BT56 60 aa6.44□□□□□ -1.38
GGA3-222ENST00000621217 LINC00846Q9NV44 126 aa6.43□□□□□ -1.38
GGA3-222ENST00000621217 NDUFB1O75438 58 aa6.43□□□□□ -1.38
GGA3-222ENST00000621217 CAMK2N2Q96S95 79 aa6.43□□□□□ -1.38
GGA3-222ENST00000621217 TRBV7-6A0A0J9YX20 115 aa6.43□□□□□ -1.38
GGA3-222ENST00000621217 SPAG11BQ08648 103 aa6.43□□□□□ -1.38
GGA3-222ENST00000621217 AMELXQ99217 191 aa6.43□□□□□ -1.38
GGA3-222ENST00000621217 CDC42SE2Q9NRR3 84 aa6.43□□□□□ -1.38
GGA3-222ENST00000621217 SPATA3Q8NHX4 192 aa6.43□□□□□ -1.38
GGA3-222ENST00000621217 NDUFS5O43920 106 aa6.42□□□□□ -1.38
GGA3-222ENST00000621217 NTM-AS1Q6ZSK4 140 aa6.42□□□□□ -1.38
GGA3-222ENST00000621217 C11orf45Q8TAV5 145 aa6.42□□□□□ -1.38
GGA3-222ENST00000621217 KRTAP24-1Q3LI83 254 aa6.42□□□□□ -1.38
GGA3-222ENST00000621217 UBE2BP63146 152 aa6.42□□□□□ -1.38
GGA3-222ENST00000621217 FHL3Q13643 280 aa6.42□□□□□ -1.38
GGA3-222ENST00000621217 SMIM1B2RUZ4 78 aa6.41□□□□□ -1.38
GGA3-222ENST00000621217 NANOS2P60321 138 aaKnown RBP6.41□□□□□ -1.38
GGA3-222ENST00000621217 FAM19A1Q7Z5A9 133 aa6.41□□□□□ -1.38
GGA3-222ENST00000621217 KMT2BQ9UMN6 2715 aaPredicted RBP6.41□□□□□ -1.38
GGA3-222ENST00000621217 KRTAP10-3P60369 221 aa6.41□□□□□ -1.38
GGA3-222ENST00000621217 PRR4Q16378 134 aa6.41□□□□□ -1.38
GGA3-222ENST00000621217 Q6ZQY7 126 aa6.41□□□□□ -1.38
GGA3-222ENST00000621217 RMI2Q96E14 147 aa6.41□□□□□ -1.38
GGA3-222ENST00000621217 DEFB131BA0A096LNP1 70 aa6.4□□□□□ -1.38
GGA3-222ENST00000621217 TRBV6-4A0A1B0GX49 114 aa6.4□□□□□ -1.38
GGA3-222ENST00000621217 EIF4EBP3O60516 100 aaPredicted RBP6.4□□□□□ -1.38
GGA3-222ENST00000621217 CCL18P55774 89 aa6.4□□□□□ -1.38
GGA3-222ENST00000621217 PRR3P79522 188 aaKnown RBP6.4□□□□□ -1.38
GGA3-222ENST00000621217 Q8N3U1 123 aa6.4□□□□□ -1.38
GGA3-222ENST00000621217 LRCOL1A6NCL2 159 aa6.4□□□□□ -1.39
GGA3-222ENST00000621217 UBE2AP49459 152 aa6.4□□□□□ -1.39
GGA3-222ENST00000621217 A0A0J9YWU9 116 aa6.39□□□□□ -1.39
GGA3-222ENST00000621217 PRYO14603 147 aa6.39□□□□□ -1.39
GGA3-222ENST00000621217 BEAN1Q3B7T3 259 aa6.39□□□□□ -1.39
GGA3-222ENST00000621217 TRBV10-3A0A0K0K1G6 114 aa6.39□□□□□ -1.39
GGA3-222ENST00000621217 C9orf116Q5BN46 136 aaPredicted RBP6.39□□□□□ -1.39
GGA3-222ENST00000621217 ESRGQ1W209 222 aa6.39□□□□□ -1.39
GGA3-222ENST00000621217 OTOGQ6ZRI0 2925 aa6.39□□□□□ -1.39
GGA3-222ENST00000621217 REG3AQ06141 175 aa6.38□□□□□ -1.39
GGA3-222ENST00000621217 A0A087WYN8 130 aa6.38□□□□□ -1.39
GGA3-222ENST00000621217 FHL2Q14192 279 aa6.38□□□□□ -1.39
GGA3-222ENST00000621217 Q6ZTC4 211 aa6.38□□□□□ -1.39
GGA3-222ENST00000621217 TMEM254Q8TBM7 123 aa6.38□□□□□ -1.39
GGA3-222ENST00000621217 CHCHD10Q8WYQ3 142 aaPredicted RBP6.38□□□□□ -1.39
GGA3-222ENST00000621217 XAGE1AQ9HD64 81 aa6.38□□□□□ -1.39
GGA3-222ENST00000621217 CELA1Q9UNI1 258 aa6.38□□□□□ -1.39
GGA3-222ENST00000621217 LINC00959A0A1B0GUT2 108 aa6.37□□□□□ -1.39
GGA3-222ENST00000621217 KPRPQ5T749 579 aaPredicted RBP6.37□□□□□ -1.39
GGA3-222ENST00000621217 PSPHP1O15172 72 aa6.36□□□□□ -1.39
GGA3-222ENST00000621217 BCE1O60756 84 aa6.36□□□□□ -1.39
GGA3-222ENST00000621217 Q8N814 137 aa6.36□□□□□ -1.39
GGA3-222ENST00000621217 C3orf84H3BNL1 204 aa6.36□□□□□ -1.39
GGA3-222ENST00000621217 FBN1P35555 2871 aaKnown RBP6.34□□□□□ -1.39
GGA3-222ENST00000621217 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.33□□□□□ -1.4
GGA3-222ENST00000621217 FAM30AQ9NZY2 134 aa6.33□□□□□ -1.4
GGA3-222ENST00000621217 TENM1Q9UKZ4 2725 aa6.33□□□□□ -1.4
GGA3-222ENST00000621217 PRR15LQ9BU68 103 aa6.33□□□□□ -1.4
GGA3-222ENST00000621217 F8WDY8 70 aa6.32□□□□□ -1.4
GGA3-222ENST00000621217 Q6ZVQ6 151 aa6.32□□□□□ -1.4
GGA3-222ENST00000621217 VPS13CQ709C8 3753 aa6.32□□□□□ -1.4
GGA3-222ENST00000621217 WIPF1O43516 503 aa6.32□□□□□ -1.4
GGA3-222ENST00000621217 LINC01547P58512 204 aaPredicted RBP6.32□□□□□ -1.4
GGA3-222ENST00000621217 C6orf223Q8N319 242 aa6.32□□□□□ -1.4
GGA3-222ENST00000621217 H0Y9J4 135 aa6.32□□□□□ -1.4
GGA3-222ENST00000621217 A8MTW9 85 aa6.31□□□□□ -1.4
GGA3-222ENST00000621217 UNQ6190/PRO20217Q6UXQ8 127 aa6.31□□□□□ -1.4
GGA3-222ENST00000621217 X6R8D5 127 aa6.31□□□□□ -1.4
GGA3-222ENST00000621217 M0R2N4 97 aa6.31□□□□□ -1.4
GGA3-222ENST00000621217 GIG44P09565 113 aaPredicted RBP6.31□□□□□ -1.4
GGA3-222ENST00000621217 WFDC10BQ8IUB3 73 aa6.31□□□□□ -1.4
GGA3-222ENST00000621217 LINC00337Q8N6G1 96 aa6.31□□□□□ -1.4
GGA3-222ENST00000621217 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.3□□□□□ -1.4
GGA3-222ENST00000621217 IGKV2-24A0A0C4DH68 120 aa6.3□□□□□ -1.4
GGA3-222ENST00000621217 LITAFQ99732 161 aa6.3□□□□□ -1.4
GGA3-222ENST00000621217 VWFP04275 2813 aa6.3□□□□□ -1.4
GGA3-222ENST00000621217 PLAC8L1A1L4L8 177 aa6.3□□□□□ -1.4
GGA3-222ENST00000621217 COX17Q14061 63 aa6.29□□□□□ -1.4
GGA3-222ENST00000621217 LINC00336Q6ZUF6 198 aa6.29□□□□□ -1.4
GGA3-222ENST00000621217 WFDC13Q8IUB5 93 aa6.29□□□□□ -1.4
GGA3-222ENST00000621217 IGKV4-1P06312 121 aa6.29□□□□□ -1.4
GGA3-222ENST00000621217 CXCL6P80162 114 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms