RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 A0A0B4J2C4 111 aa6.77□□□□□ -1.33
VTA1-205ENST00000620996 TRBV7-7A0A0K0K1E9 115 aa6.77□□□□□ -1.33
VTA1-205ENST00000620996 SDIM1Q6ZPB5 146 aa6.76□□□□□ -1.33
VTA1-205ENST00000620996 SOSTDC1Q6X4U4 206 aa6.76□□□□□ -1.33
VTA1-205ENST00000620996 COPS9Q8WXC6 57 aa6.76□□□□□ -1.33
VTA1-205ENST00000620996 PRO0628Q9UI54 55 aa6.76□□□□□ -1.33
VTA1-205ENST00000620996 TRAV10A0A0B4J240 114 aa6.75□□□□□ -1.33
VTA1-205ENST00000620996 IGKV3D-7A0A0C4DH55 119 aa6.75□□□□□ -1.33
VTA1-205ENST00000620996 BRK1Q8WUW1 75 aa6.75□□□□□ -1.33
VTA1-205ENST00000620996 TM2D3Q9BRN9 247 aa6.75□□□□□ -1.33
VTA1-205ENST00000620996 RPS28P62857 69 aaKnown RBP6.75□□□□□ -1.33
VTA1-205ENST00000620996 A0A087WVE0 104 aa6.75□□□□□ -1.33
VTA1-205ENST00000620996 ENHOQ6UWT2 76 aa6.75□□□□□ -1.33
VTA1-205ENST00000620996 Q9HAA7 133 aa6.75□□□□□ -1.33
VTA1-205ENST00000620996 H3BNG1 76 aa6.74□□□□□ -1.33
VTA1-205ENST00000620996 SPAG11BQ08648 103 aa6.74□□□□□ -1.33
VTA1-205ENST00000620996 Q8IZM0 81 aa6.74□□□□□ -1.33
VTA1-205ENST00000620996 DNAH3Q8TD57 4116 aa6.74□□□□□ -1.33
VTA1-205ENST00000620996 C9orf116Q5BN46 136 aaPredicted RBP6.74□□□□□ -1.33
VTA1-205ENST00000620996 C6orf223Q8N319 242 aa6.74□□□□□ -1.33
VTA1-205ENST00000620996 SND1-IT1Q9HBX3 110 aa6.74□□□□□ -1.33
VTA1-205ENST00000620996 IGKV2D-24A0A075B6R9 120 aa6.72□□□□□ -1.33
VTA1-205ENST00000620996 IBA57-AS1B1ANH7 110 aa6.72□□□□□ -1.33
VTA1-205ENST00000620996 HIGD2BQ4VC39 106 aa6.72□□□□□ -1.33
VTA1-205ENST00000620996 COX6CP09669 75 aa6.72□□□□□ -1.33
VTA1-205ENST00000620996 CRYGAP11844 174 aa6.72□□□□□ -1.33
VTA1-205ENST00000620996 C1orf195Q5TG92 126 aa6.72□□□□□ -1.33
VTA1-205ENST00000620996 TMEM258P61165 79 aa6.71□□□□□ -1.33
VTA1-205ENST00000620996 CCL18P55774 89 aa6.71□□□□□ -1.34
VTA1-205ENST00000620996 PRR34Q9NV39 138 aa6.71□□□□□ -1.34
VTA1-205ENST00000620996 UNQ6190/PRO20217Q6UXQ8 127 aa6.7□□□□□ -1.34
VTA1-205ENST00000620996 LINC00643Q86TS7 51 aa6.7□□□□□ -1.34
VTA1-205ENST00000620996 LINC01561Q8N1V8 128 aa6.7□□□□□ -1.34
VTA1-205ENST00000620996 ZNF561-AS1K7EIQ3 104 aa6.69□□□□□ -1.34
VTA1-205ENST00000620996 KIAA0087Q14695 138 aa6.69□□□□□ -1.34
VTA1-205ENST00000620996 C10orf25Q5T742 122 aa6.69□□□□□ -1.34
VTA1-205ENST00000620996 ATOX1O00244 68 aa6.69□□□□□ -1.34
VTA1-205ENST00000620996 CXCL5P42830 114 aa6.69□□□□□ -1.34
VTA1-205ENST00000620996 HIST1H4AP62805 103 aaKnown RBP6.68□□□□□ -1.34
VTA1-205ENST00000620996 LINC00588Q9Y4M8 146 aa6.68□□□□□ -1.34
VTA1-205ENST00000620996 TRBV30A0A0K0K1B3 111 aa6.68□□□□□ -1.34
VTA1-205ENST00000620996 TRAV13-2A0A0B4J235 113 aa6.67□□□□□ -1.34
VTA1-205ENST00000620996 PRR3P79522 188 aaKnown RBP6.67□□□□□ -1.34
VTA1-205ENST00000620996 IMUPQ9GZP8 106 aa6.67□□□□□ -1.34
VTA1-205ENST00000620996 LINC01556Q5JQF7 62 aa6.67□□□□□ -1.34
VTA1-205ENST00000620996 LINC00337Q8N6G1 96 aa6.67□□□□□ -1.34
VTA1-205ENST00000620996 CAMK2N2Q96S95 79 aa6.67□□□□□ -1.34
VTA1-205ENST00000620996 STAB2Q8WWQ8 2551 aa6.67□□□□□ -1.34
VTA1-205ENST00000620996 FAM240AA0A1B0GVK7 77 aa6.67□□□□□ -1.34
VTA1-205ENST00000620996 H3BT86 120 aa6.67□□□□□ -1.34
VTA1-205ENST00000620996 UBE2DNLQ8IWF7 75 aa6.66□□□□□ -1.34
VTA1-205ENST00000620996 NCR3O14931 201 aa6.66□□□□□ -1.34
VTA1-205ENST00000620996 C20orf197Q8N268 126 aa6.66□□□□□ -1.34
VTA1-205ENST00000620996 IGKV2-28A0A075B6P5 120 aa6.65□□□□□ -1.34
VTA1-205ENST00000620996 IGKV2D-28P01615 120 aa6.65□□□□□ -1.34
VTA1-205ENST00000620996 RPL18AQ02543 176 aaKnown RBP6.65□□□□□ -1.34
VTA1-205ENST00000620996 HUWE1Q7Z6Z7 4374 aaKnown RBP6.65□□□□□ -1.35
VTA1-205ENST00000620996 S100A7L2Q5SY68 101 aa6.65□□□□□ -1.35
VTA1-205ENST00000620996 SERP2Q8N6R1 65 aa6.65□□□□□ -1.35
VTA1-205ENST00000620996 B9D2Q9BPU9 175 aa6.64□□□□□ -1.35
VTA1-205ENST00000620996 XAGE1AQ9HD64 81 aa6.64□□□□□ -1.35
VTA1-205ENST00000620996 LECT2O14960 151 aa6.63□□□□□ -1.35
VTA1-205ENST00000620996 LINC00474Q9P2X8 69 aa6.63□□□□□ -1.35
VTA1-205ENST00000620996 DNAH10OSP0CZ25 163 aa6.63□□□□□ -1.35
VTA1-205ENST00000620996 COX17Q14061 63 aa6.63□□□□□ -1.35
VTA1-205ENST00000620996 C6orf48Q9UBA6 75 aa6.63□□□□□ -1.35
VTA1-205ENST00000620996 COL7A1Q02388 2944 aa6.63□□□□□ -1.35
VTA1-205ENST00000620996 TRAV23DV6A0A075B6W5 121 aa6.63□□□□□ -1.35
VTA1-205ENST00000620996 USP17L23D6RBM5 183 aa6.63□□□□□ -1.35
VTA1-205ENST00000620996 LST1O00453 97 aa6.63□□□□□ -1.35
VTA1-205ENST00000620996 MPLKIPQ8TAP9 179 aa6.63□□□□□ -1.35
VTA1-205ENST00000620996 SMIM11BQ8TCY0 68 aa6.63□□□□□ -1.35
VTA1-205ENST00000620996 ACYP1P07311 99 aa6.61□□□□□ -1.35
VTA1-205ENST00000620996 RBM3P98179 157 aaKnown RBP6.61□□□□□ -1.35
VTA1-205ENST00000620996 Q6ZRU5 148 aa6.61□□□□□ -1.35
VTA1-205ENST00000620996 C15orf56Q8N910 161 aa6.61□□□□□ -1.35
VTA1-205ENST00000620996 BAALC-AS2P0C853 105 aa6.61□□□□□ -1.35
VTA1-205ENST00000620996 UPK3BQ9BT76 320 aa6.6□□□□□ -1.35
VTA1-205ENST00000620996 DNAL4O96015 105 aa6.6□□□□□ -1.35
VTA1-205ENST00000620996 CASC10Q5T4H9 136 aa6.6□□□□□ -1.35
VTA1-205ENST00000620996 KRTAP26-1Q6PEX3 210 aa6.6□□□□□ -1.35
VTA1-205ENST00000620996 C14orf132Q9NPU4 83 aa6.59□□□□□ -1.35
VTA1-205ENST00000620996 GHRHP01286 108 aa6.59□□□□□ -1.35
VTA1-205ENST00000620996 FAM218AQ96MZ4 157 aa6.59□□□□□ -1.35
VTA1-205ENST00000620996 SNURFQ9Y675 71 aa6.59□□□□□ -1.35
VTA1-205ENST00000620996 RPL28P46779 137 aaKnown RBP6.58□□□□□ -1.36
VTA1-205ENST00000620996 Q8NDZ9 215 aa6.58□□□□□ -1.36
VTA1-205ENST00000620996 RMI2Q96E14 147 aa6.58□□□□□ -1.36
VTA1-205ENST00000620996 SYCNQ0VAF6 134 aa6.58□□□□□ -1.36
VTA1-205ENST00000620996 PSCAO43653 123 aa6.58□□□□□ -1.36
VTA1-205ENST00000620996 A0A087WYN8 130 aa6.57□□□□□ -1.36
VTA1-205ENST00000620996 FP248Q71RG6 208 aaPredicted RBP6.56□□□□□ -1.36
VTA1-205ENST00000620996 NDUFC2O95298 119 aa6.56□□□□□ -1.36
VTA1-205ENST00000620996 GVQW2A0A096LPI5 108 aaPredicted RBP6.55□□□□□ -1.36
VTA1-205ENST00000620996 LINC00846Q9NV44 126 aa6.55□□□□□ -1.36
VTA1-205ENST00000620996 DNAH9Q9NYC9 4486 aa6.55□□□□□ -1.36
VTA1-205ENST00000620996 SLPIP03973 132 aa6.55□□□□□ -1.36
VTA1-205ENST00000620996 C6orf99Q4VX62 202 aa6.55□□□□□ -1.36
VTA1-205ENST00000620996 APLNQ9ULZ1 77 aa6.55□□□□□ -1.36
VTA1-205ENST00000620996 C9orf129Q5T035 196 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms