RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 LINC01547P58512 204 aaPredicted RBP11.04□□□□□ -0.64
SEMA3B-214ENST00000619119 SCXQ7RTU7 201 aa11.03□□□□□ -0.64
SEMA3B-214ENST00000619119 M0R2N4 97 aa11.03□□□□□ -0.64
SEMA3B-214ENST00000619119 NDUFC1O43677 76 aa11.02□□□□□ -0.65
SEMA3B-214ENST00000619119 INSP01308 110 aa11.02□□□□□ -0.65
SEMA3B-214ENST00000619119 BCE1O60756 84 aa11.02□□□□□ -0.65
SEMA3B-214ENST00000619119 ATP5EP56381 51 aaPredicted RBP11.02□□□□□ -0.65
SEMA3B-214ENST00000619119 Q8N3U1 123 aa11.02□□□□□ -0.65
SEMA3B-214ENST00000619119 COX7B2Q8TF08 81 aa11.02□□□□□ -0.65
SEMA3B-214ENST00000619119 TEP1Q99973 2627 aaKnown RBP11□□□□□ -0.65
SEMA3B-214ENST00000619119 A8MTW9 85 aa11□□□□□ -0.65
SEMA3B-214ENST00000619119 TMEM256-PLSCR3K7ERE1 68 aa10.99□□□□□ -0.65
SEMA3B-214ENST00000619119 TRRAPQ9Y4A5 3859 aa10.98□□□□□ -0.65
SEMA3B-214ENST00000619119 IGLV1-51P01701 117 aa10.98□□□□□ -0.65
SEMA3B-214ENST00000619119 Q6ZVQ6 151 aa10.98□□□□□ -0.65
SEMA3B-214ENST00000619119 SPATA3Q8NHX4 192 aa10.98□□□□□ -0.65
SEMA3B-214ENST00000619119 TRBV7-4A0A0J9YYF1 115 aa10.98□□□□□ -0.65
SEMA3B-214ENST00000619119 Q8N814 137 aa10.98□□□□□ -0.65
SEMA3B-214ENST00000619119 ESRGQ1W209 222 aa10.98□□□□□ -0.65
SEMA3B-214ENST00000619119 C1orf158Q8N1D5 194 aa10.98□□□□□ -0.65
SEMA3B-214ENST00000619119 TMEM254Q8TBM7 123 aa10.97□□□□□ -0.65
SEMA3B-214ENST00000619119 NBEAL2Q6ZNJ1 2754 aa10.97□□□□□ -0.65
SEMA3B-214ENST00000619119 NREPQ16612 68 aa10.97□□□□□ -0.65
SEMA3B-214ENST00000619119 LRCOL1A6NCL2 159 aa10.96□□□□□ -0.65
SEMA3B-214ENST00000619119 IGHV3-53P01767 116 aa10.96□□□□□ -0.65
SEMA3B-214ENST00000619119 TRBV10-1A0A0K0K1A3 114 aa10.96□□□□□ -0.66
SEMA3B-214ENST00000619119 TRBV6-4A0A1B0GX49 114 aa10.95□□□□□ -0.66
SEMA3B-214ENST00000619119 PLAC8L1A1L4L8 177 aa10.95□□□□□ -0.66
SEMA3B-214ENST00000619119 PRR3P79522 188 aaKnown RBP10.95□□□□□ -0.66
SEMA3B-214ENST00000619119 Q6ZQT0 140 aa10.94□□□□□ -0.66
SEMA3B-214ENST00000619119 CDC42SE2Q9NRR3 84 aa10.94□□□□□ -0.66
SEMA3B-214ENST00000619119 LAMTOR3Q9UHA4 124 aa10.94□□□□□ -0.66
SEMA3B-214ENST00000619119 TRGV1A0A0A0MS02 117 aa10.94□□□□□ -0.66
SEMA3B-214ENST00000619119 LINC00167Q96N53 147 aa10.93□□□□□ -0.66
SEMA3B-214ENST00000619119 IBA57-AS1B1ANH7 110 aa10.93□□□□□ -0.66
SEMA3B-214ENST00000619119 FUSP35637 526 aaKnown RBP eCLIP10.93□□□□□ -0.66
SEMA3B-214ENST00000619119 FAM19A3Q7Z5A8 133 aa10.92□□□□□ -0.66
SEMA3B-214ENST00000619119 C19orf73Q9NVV2 129 aa10.92□□□□□ -0.66
SEMA3B-214ENST00000619119 NTM-AS1Q6ZSK4 140 aa10.92□□□□□ -0.66
SEMA3B-214ENST00000619119 PRR15Q8IV56 129 aa10.92□□□□□ -0.66
SEMA3B-214ENST00000619119 GIG44P09565 113 aaPredicted RBP10.91□□□□□ -0.66
SEMA3B-214ENST00000619119 DAD1P61803 113 aa10.91□□□□□ -0.66
SEMA3B-214ENST00000619119 NOP10Q9NPE3 64 aaKnown RBP10.9□□□□□ -0.66
SEMA3B-214ENST00000619119 PRYO14603 147 aa10.89□□□□□ -0.67
SEMA3B-214ENST00000619119 UBE2L6O14933 153 aa10.89□□□□□ -0.67
SEMA3B-214ENST00000619119 K7EQD1 137 aa10.89□□□□□ -0.67
SEMA3B-214ENST00000619119 BPY2O14599 106 aa10.87□□□□□ -0.67
SEMA3B-214ENST00000619119 NANOS2P60321 138 aaKnown RBP10.87□□□□□ -0.67
SEMA3B-214ENST00000619119 Q6ZRU5 148 aa10.87□□□□□ -0.67
SEMA3B-214ENST00000619119 PSPHP1O15172 72 aa10.86□□□□□ -0.67
SEMA3B-214ENST00000619119 CMC4P56277 68 aaPredicted RBP10.86□□□□□ -0.67
SEMA3B-214ENST00000619119 Q8N9L7 120 aa10.86□□□□□ -0.67
SEMA3B-214ENST00000619119 CXCL6P80162 114 aa10.85□□□□□ -0.67
SEMA3B-214ENST00000619119 C6orf99Q4VX62 202 aa10.85□□□□□ -0.67
SEMA3B-214ENST00000619119 CD164Q04900 197 aa10.84□□□□□ -0.67
SEMA3B-214ENST00000619119 Q6ZTC4 211 aa10.83□□□□□ -0.68
SEMA3B-214ENST00000619119 TRGV2A0A075B6R0 118 aa10.83□□□□□ -0.68
SEMA3B-214ENST00000619119 HIGD2AQ9BW72 106 aa10.83□□□□□ -0.68
SEMA3B-214ENST00000619119 LOC110117498A0A087WWA1 95 aa10.83□□□□□ -0.68
SEMA3B-214ENST00000619119 STAB1Q9NY15 2570 aa10.82□□□□□ -0.68
SEMA3B-214ENST00000619119 C6orf223Q8N319 242 aa10.82□□□□□ -0.68
SEMA3B-214ENST00000619119 CSNK1G2-AS1Q8NCQ2 148 aa10.82□□□□□ -0.68
SEMA3B-214ENST00000619119 C16orf74Q96GX8 76 aa10.8□□□□□ -0.68
SEMA3B-214ENST00000619119 MAST4O15021 2626 aa10.8□□□□□ -0.68
SEMA3B-214ENST00000619119 BAHCC1Q9P281 2608 aa10.8□□□□□ -0.68
SEMA3B-214ENST00000619119 C9orf66Q5T8R8 295 aa10.79□□□□□ -0.68
SEMA3B-214ENST00000619119 Q6ZRP5 223 aa10.79□□□□□ -0.68
SEMA3B-214ENST00000619119 DEFB130BP0DP73 79 aa10.79□□□□□ -0.68
SEMA3B-214ENST00000619119 DEFB130AP0DP74 79 aa10.79□□□□□ -0.68
SEMA3B-214ENST00000619119 IGLV4-60A0A075B6I1 120 aa10.78□□□□□ -0.68
SEMA3B-214ENST00000619119 IGHV3OR16-9A0A0B4J2B5 98 aa10.78□□□□□ -0.68
SEMA3B-214ENST00000619119 LOC100131303A0A0U1RQF7 123 aa10.77□□□□□ -0.68
SEMA3B-214ENST00000619119 PRB2P02812 416 aaPredicted RBP10.77□□□□□ -0.68
SEMA3B-214ENST00000619119 LINC00575Q6W349 94 aa10.77□□□□□ -0.69
SEMA3B-214ENST00000619119 MRPL55Q7Z7F7 128 aaKnown RBP10.77□□□□□ -0.69
SEMA3B-214ENST00000619119 FBN1P35555 2871 aaKnown RBP10.77□□□□□ -0.69
SEMA3B-214ENST00000619119 DEFB4AO15263 64 aa10.77□□□□□ -0.69
SEMA3B-214ENST00000619119 CD164L2Q6UWJ8 174 aa10.77□□□□□ -0.69
SEMA3B-214ENST00000619119 MUC7Q8TAX7 377 aa10.77□□□□□ -0.69
SEMA3B-214ENST00000619119 A8MU10 97 aa10.76□□□□□ -0.69
SEMA3B-214ENST00000619119 Q6ZQY7 126 aa10.76□□□□□ -0.69
SEMA3B-214ENST00000619119 hDV103S1A0JD37 113 aa10.76□□□□□ -0.69
SEMA3B-214ENST00000619119 TRGV4A0A0C4DH28 118 aa10.75□□□□□ -0.69
SEMA3B-214ENST00000619119 ERC2-IT1O76042 136 aa10.75□□□□□ -0.69
SEMA3B-214ENST00000619119 DEFB135Q30KP9 77 aa10.75□□□□□ -0.69
SEMA3B-214ENST00000619119 C11orf45Q8TAV5 145 aa10.74□□□□□ -0.69
SEMA3B-214ENST00000619119 OCR1Q9BZK8 76 aa10.73□□□□□ -0.69
SEMA3B-214ENST00000619119 PKD1L1Q8TDX9 2849 aa10.72□□□□□ -0.69
SEMA3B-214ENST00000619119 CYSRT1A8MQ03 144 aa10.72□□□□□ -0.69
SEMA3B-214ENST00000619119 C1orf64Q8NEQ6 169 aa10.72□□□□□ -0.69
SEMA3B-214ENST00000619119 CELA1Q9UNI1 258 aa10.72□□□□□ -0.69
SEMA3B-214ENST00000619119 PRR4Q16378 134 aa10.71□□□□□ -0.69
SEMA3B-214ENST00000619119 H3BS24 57 aa10.71□□□□□ -0.69
SEMA3B-214ENST00000619119 COL6A5A8TX70 2615 aa10.71□□□□□ -0.7
SEMA3B-214ENST00000619119 TRAV22A0A0B4J277 110 aa10.71□□□□□ -0.7
SEMA3B-214ENST00000619119 Q1T7F1 81 aa10.71□□□□□ -0.7
SEMA3B-214ENST00000619119 KRTAP24-1Q3LI83 254 aa10.71□□□□□ -0.7
SEMA3B-214ENST00000619119 OXLD1Q5BKU9 147 aa10.7□□□□□ -0.7
SEMA3B-214ENST00000619119 X6R8D5 127 aa10.7□□□□□ -0.7
SEMA3B-214ENST00000619119 CLPSL2Q6UWE3 100 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms