RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 BOD1L1Q8NFC6 3051 aa9.56□□□□□ -0.88
CNOT3-210ENST00000618939 C10orf25Q5T742 122 aa9.55□□□□□ -0.88
CNOT3-210ENST00000618939 COL6A3P12111 3177 aa9.54□□□□□ -0.88
CNOT3-210ENST00000618939 CFAP46Q8IYW2 2715 aa9.54□□□□□ -0.88
CNOT3-210ENST00000618939 H0Y9J4 135 aa9.54□□□□□ -0.88
CNOT3-210ENST00000618939 C19orf73Q9NVV2 129 aa9.54□□□□□ -0.88
CNOT3-210ENST00000618939 PLAC8L1A1L4L8 177 aa9.53□□□□□ -0.88
CNOT3-210ENST00000618939 C6orf48Q9UBA6 75 aa9.52□□□□□ -0.88
CNOT3-210ENST00000618939 TRAV7A0A075B6U4 112 aa9.52□□□□□ -0.89
CNOT3-210ENST00000618939 Q6ZVQ6 151 aa9.52□□□□□ -0.89
CNOT3-210ENST00000618939 Q8NAQ8 132 aa9.52□□□□□ -0.89
CNOT3-210ENST00000618939 ADGRG4Q8IZF6 3080 aa9.52□□□□□ -0.89
CNOT3-210ENST00000618939 F8WDY8 70 aa9.51□□□□□ -0.89
CNOT3-210ENST00000618939 PPDPFQ9H3Y8 114 aa9.51□□□□□ -0.89
CNOT3-210ENST00000618939 NDUFC1O43677 76 aa9.51□□□□□ -0.89
CNOT3-210ENST00000618939 FREM2Q5SZK8 3169 aa9.49□□□□□ -0.89
CNOT3-210ENST00000618939 C1orf137Q5JT78 98 aa9.49□□□□□ -0.89
CNOT3-210ENST00000618939 ESRGQ1W209 222 aa9.49□□□□□ -0.89
CNOT3-210ENST00000618939 KRTAP1-3Q8IUG1 177 aa9.49□□□□□ -0.89
CNOT3-210ENST00000618939 LINC01547P58512 204 aaPredicted RBP9.48□□□□□ -0.89
CNOT3-210ENST00000618939 LINC01556Q5JQF7 62 aa9.47□□□□□ -0.89
CNOT3-210ENST00000618939 ATRQ13535 2644 aa9.46□□□□□ -0.89
CNOT3-210ENST00000618939 H3BNG1 76 aa9.45□□□□□ -0.9
CNOT3-210ENST00000618939 USP24Q9UPU5 2620 aa9.45□□□□□ -0.9
CNOT3-210ENST00000618939 WFDC13Q8IUB5 93 aa9.45□□□□□ -0.9
CNOT3-210ENST00000618939 REG3GQ6UW15 175 aa9.44□□□□□ -0.9
CNOT3-210ENST00000618939 PRYO14603 147 aa9.44□□□□□ -0.9
CNOT3-210ENST00000618939 ATP5EP56381 51 aaPredicted RBP9.44□□□□□ -0.9
CNOT3-210ENST00000618939 SPATA3Q8NHX4 192 aa9.44□□□□□ -0.9
CNOT3-210ENST00000618939 MRPL55Q7Z7F7 128 aaKnown RBP9.43□□□□□ -0.9
CNOT3-210ENST00000618939 SMCR5Q8TEV8 140 aa9.43□□□□□ -0.9
CNOT3-210ENST00000618939 LINC00612Q8N6U2 182 aa9.43□□□□□ -0.9
CNOT3-210ENST00000618939 FAM104AQ969W3 186 aa9.43□□□□□ -0.9
CNOT3-210ENST00000618939 HELZ2Q9BYK8 2649 aaKnown RBP9.42□□□□□ -0.9
CNOT3-210ENST00000618939 C7orf33Q8WU49 177 aa9.42□□□□□ -0.9
CNOT3-210ENST00000618939 KIAA0087Q14695 138 aa9.41□□□□□ -0.9
CNOT3-210ENST00000618939 M0R2N4 97 aa9.41□□□□□ -0.9
CNOT3-210ENST00000618939 CXCL6P80162 114 aa9.41□□□□□ -0.9
CNOT3-210ENST00000618939 MPLKIPQ8TAP9 179 aa9.41□□□□□ -0.9
CNOT3-210ENST00000618939 FAM30AQ9NZY2 134 aa9.41□□□□□ -0.9
CNOT3-210ENST00000618939 KALRNO60229 2985 aa9.41□□□□□ -0.9
CNOT3-210ENST00000618939 ELOF1P60002 83 aaKnown RBP9.4□□□□□ -0.9
CNOT3-210ENST00000618939 Q6ZQT0 140 aa9.4□□□□□ -0.9
CNOT3-210ENST00000618939 ATMQ13315 3056 aa9.4□□□□□ -0.9
CNOT3-210ENST00000618939 KRTAP10-3P60369 221 aa9.4□□□□□ -0.9
CNOT3-210ENST00000618939 GVQW2A0A096LPI5 108 aaPredicted RBP9.4□□□□□ -0.91
CNOT3-210ENST00000618939 CRYGAP11844 174 aa9.39□□□□□ -0.91
CNOT3-210ENST00000618939 DMXL2Q8TDJ6 3036 aa9.39□□□□□ -0.91
CNOT3-210ENST00000618939 TRBV7-6A0A0J9YX20 115 aa9.39□□□□□ -0.91
CNOT3-210ENST00000618939 C22orf24Q9Y442 160 aa9.39□□□□□ -0.91
CNOT3-210ENST00000618939 TNRC18O15417 2968 aaPredicted RBP9.39□□□□□ -0.91
CNOT3-210ENST00000618939 KRTAP1-1Q07627 177 aa9.39□□□□□ -0.91
CNOT3-210ENST00000618939 IGSF10Q6WRI0 2623 aa9.38□□□□□ -0.91
CNOT3-210ENST00000618939 C5orf47Q569G3 176 aa9.38□□□□□ -0.91
CNOT3-210ENST00000618939 LINC00474Q9P2X8 69 aa9.37□□□□□ -0.91
CNOT3-210ENST00000618939 LOC110117498A0A087WWA1 95 aa9.37□□□□□ -0.91
CNOT3-210ENST00000618939 IGLV6-57P01721 117 aa9.37□□□□□ -0.91
CNOT3-210ENST00000618939 MYO15AQ9UKN7 3530 aa9.37□□□□□ -0.91
CNOT3-210ENST00000618939 Q8N9L7 120 aa9.37□□□□□ -0.91
CNOT3-210ENST00000618939 BRK1Q8WUW1 75 aa9.37□□□□□ -0.91
CNOT3-210ENST00000618939 NHLRC4P0CG21 123 aaPredicted RBP9.36□□□□□ -0.91
CNOT3-210ENST00000618939 KRTAP24-1Q3LI83 254 aa9.36□□□□□ -0.91
CNOT3-210ENST00000618939 CHD6Q8TD26 2715 aa9.36□□□□□ -0.91
CNOT3-210ENST00000618939 PRR34Q9NV39 138 aa9.35□□□□□ -0.91
CNOT3-210ENST00000618939 LINC00167Q96N53 147 aa9.35□□□□□ -0.91
CNOT3-210ENST00000618939 SERP1Q9Y6X1 66 aa9.35□□□□□ -0.91
CNOT3-210ENST00000618939 IGKV4-1P06312 121 aa9.35□□□□□ -0.91
CNOT3-210ENST00000618939 PRR4Q16378 134 aa9.35□□□□□ -0.91
CNOT3-210ENST00000618939 VPREB1P12018 145 aa9.34□□□□□ -0.91
CNOT3-210ENST00000618939 TMEM254Q8TBM7 123 aa9.34□□□□□ -0.91
CNOT3-210ENST00000618939 PRLHP81277 87 aa9.33□□□□□ -0.92
CNOT3-210ENST00000618939 MGAM2Q2M2H8 2515 aa9.33□□□□□ -0.92
CNOT3-210ENST00000618939 A0A087WSZ3 146 aa9.33□□□□□ -0.92
CNOT3-210ENST00000618939 SMIM26A0A096LP01 95 aa9.33□□□□□ -0.92
CNOT3-210ENST00000618939 IGLV9-49A0A0B4J1Y8 123 aa9.33□□□□□ -0.92
CNOT3-210ENST00000618939 FLNCQ14315 2725 aa9.33□□□□□ -0.92
CNOT3-210ENST00000618939 Q9BRP9 147 aa9.32□□□□□ -0.92
CNOT3-210ENST00000618939 CR1P17927 2039 aa9.32□□□□□ -0.92
CNOT3-210ENST00000618939 SVIPQ8NHG7 77 aa9.32□□□□□ -0.92
CNOT3-210ENST00000618939 USP34Q70CQ2 3546 aa9.32□□□□□ -0.92
CNOT3-210ENST00000618939 Q6ZRP5 223 aa9.32□□□□□ -0.92
CNOT3-210ENST00000618939 ZNF706Q9Y5V0 76 aaPredicted RBP9.32□□□□□ -0.92
CNOT3-210ENST00000618939 LRBAP50851 2863 aa9.31□□□□□ -0.92
CNOT3-210ENST00000618939 LINC01600Q96MT4 127 aa9.31□□□□□ -0.92
CNOT3-210ENST00000618939 HRCT1Q6UXD1 115 aa9.31□□□□□ -0.92
CNOT3-210ENST00000618939 NUPR2A6NF83 97 aa9.3□□□□□ -0.92
CNOT3-210ENST00000618939 BCE1O60756 84 aa9.3□□□□□ -0.92
CNOT3-210ENST00000618939 C4orf48Q5BLP8 95 aa9.29□□□□□ -0.92
CNOT3-210ENST00000618939 LOC400499M0QZD8 3231 aa9.29□□□□□ -0.92
CNOT3-210ENST00000618939 C9orf129Q5T035 196 aaKnown RBP9.29□□□□□ -0.92
CNOT3-210ENST00000618939 Q6ZRX8 168 aa9.29□□□□□ -0.92
CNOT3-210ENST00000618939 MAST4O15021 2626 aa9.29□□□□□ -0.92
CNOT3-210ENST00000618939 LINC00588Q9Y4M8 146 aa9.28□□□□□ -0.92
CNOT3-210ENST00000618939 CHKB-CPT1BH3BT56 60 aa9.28□□□□□ -0.92
CNOT3-210ENST00000618939 DEFB116Q30KQ4 102 aa9.28□□□□□ -0.92
CNOT3-210ENST00000618939 SPINK6Q6UWN8 80 aa9.28□□□□□ -0.92
CNOT3-210ENST00000618939 TACC2O95359 2948 aa9.28□□□□□ -0.92
CNOT3-210ENST00000618939 TEX15Q9BXT5 2789 aa9.27□□□□□ -0.93
CNOT3-210ENST00000618939 COL12A1Q99715 3063 aa9.27□□□□□ -0.93
CNOT3-210ENST00000618939 DNAH10OSP0CZ25 163 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms