RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 ENHOQ6UWT2 76 aa2.64□□□□□ -1.99
UBE2D3-233ENST00000618836 C20orf166-AS1Q96NR2 134 aa2.64□□□□□ -1.99
UBE2D3-233ENST00000618836 TMEM14CQ9P0S9 112 aa2.64□□□□□ -1.99
UBE2D3-233ENST00000618836 MAP1AP78559 2803 aaPredicted RBP2.64□□□□□ -1.99
UBE2D3-233ENST00000618836 ABCA7Q8IZY2 2146 aa2.64□□□□□ -1.99
UBE2D3-233ENST00000618836 IGLV2-18A0A075B6J9 118 aa2.64□□□□□ -1.99
UBE2D3-233ENST00000618836 C17orf98A8MV24 154 aa2.64□□□□□ -1.99
UBE2D3-233ENST00000618836 LINC00483Q53H64 154 aa2.64□□□□□ -1.99
UBE2D3-233ENST00000618836 FAM27BQ5VT28 67 aa2.64□□□□□ -1.99
UBE2D3-233ENST00000618836 C14orf132Q9NPU4 83 aa2.64□□□□□ -1.99
UBE2D3-233ENST00000618836 JMJD1CQ15652 2540 aa2.64□□□□□ -1.99
UBE2D3-233ENST00000618836 SPTBP11277 2137 aa2.64□□□□□ -1.99
UBE2D3-233ENST00000618836 IGHV1-8P0DP01 117 aa2.63□□□□□ -1.99
UBE2D3-233ENST00000618836 MRPS21P82921 87 aaKnown RBP2.63□□□□□ -1.99
UBE2D3-233ENST00000618836 CACNA1EQ15878 2313 aa2.63□□□□□ -1.99
UBE2D3-233ENST00000618836 A0A1B0GUT8 65 aa2.63□□□□□ -1.99
UBE2D3-233ENST00000618836 IGHV1-46P01743 117 aa2.63□□□□□ -1.99
UBE2D3-233ENST00000618836 TFF1P04155 84 aa2.63□□□□□ -1.99
UBE2D3-233ENST00000618836 PI4KAP42356 2102 aa2.63□□□□□ -1.99
UBE2D3-233ENST00000618836 CSAG1Q6PB30 78 aa2.63□□□□□ -1.99
UBE2D3-233ENST00000618836 Q86TA4 180 aa2.63□□□□□ -1.99
UBE2D3-233ENST00000618836 LINC01006Q8NI28 216 aa2.63□□□□□ -1.99
UBE2D3-233ENST00000618836 PRR15LQ9BU68 103 aa2.63□□□□□ -1.99
UBE2D3-233ENST00000618836 LINC01558Q9Y6Z2 57 aa2.63□□□□□ -1.99
UBE2D3-233ENST00000618836 URB1O60287 2271 aaKnown RBP2.63□□□□□ -1.99
UBE2D3-233ENST00000618836 TRBV6-1A0A0K0K1D8 114 aa2.63□□□□□ -1.99
UBE2D3-233ENST00000618836 DEFA4P12838 97 aa2.63□□□□□ -1.99
UBE2D3-233ENST00000618836 LCE3BQ5TA77 95 aa2.63□□□□□ -1.99
UBE2D3-233ENST00000618836 LINC01590Q5TEZ4 76 aa2.63□□□□□ -1.99
UBE2D3-233ENST00000618836 IGKV1D-37A0A075B6S9 117 aa2.62□□□□□ -1.99
UBE2D3-233ENST00000618836 LCE1DQ5T752 114 aa2.62□□□□□ -1.99
UBE2D3-233ENST00000618836 Q8N1X5 172 aa2.62□□□□□ -1.99
UBE2D3-233ENST00000618836 C14orf178Q8N769 122 aaPredicted RBP2.62□□□□□ -1.99
UBE2D3-233ENST00000618836 IGLV10-54A0A075B6I4 117 aa2.62□□□□□ -1.99
UBE2D3-233ENST00000618836 A8MUU9 505 aa2.62□□□□□ -1.99
UBE2D3-233ENST00000618836 LINC01547P58512 204 aaPredicted RBP2.62□□□□□ -1.99
UBE2D3-233ENST00000618836 KRTAP10-9P60411 292 aa2.62□□□□□ -1.99
UBE2D3-233ENST00000618836 HSPG2P98160 4391 aa2.62□□□□□ -1.99
UBE2D3-233ENST00000618836 DAZAP2Q15038 168 aaPredicted RBP2.62□□□□□ -1.99
UBE2D3-233ENST00000618836 Q1RN00 199 aa2.62□□□□□ -1.99
UBE2D3-233ENST00000618836 FAM74A4Q5TZK3 123 aa2.62□□□□□ -1.99
UBE2D3-233ENST00000618836 CIRBP-AS1Q8TBR5 109 aa2.62□□□□□ -1.99
UBE2D3-233ENST00000618836 LENEPQ9Y5L5 61 aa2.62□□□□□ -1.99
UBE2D3-233ENST00000618836 STAB1Q9NY15 2570 aa2.62□□□□□ -1.99
UBE2D3-233ENST00000618836 HMCN2Q8NDA2 5059 aa2.62□□□□□ -1.99
UBE2D3-233ENST00000618836 IGKV1D-42A0A075B6H8 117 aa2.62□□□□□ -1.99
UBE2D3-233ENST00000618836 M0R135 149 aa2.62□□□□□ -1.99
UBE2D3-233ENST00000618836 TFF3Q07654 80 aa2.62□□□□□ -1.99
UBE2D3-233ENST00000618836 C10orf25Q5T742 122 aa2.62□□□□□ -1.99
UBE2D3-233ENST00000618836 LITAFQ99732 161 aa2.62□□□□□ -1.99
UBE2D3-233ENST00000618836 CABIN1Q9Y6J0 2220 aa2.61□□□□□ -1.99
UBE2D3-233ENST00000618836 M0R1W7 72 aa2.61□□□□□ -1.99
UBE2D3-233ENST00000618836 SVILO95425 2214 aa2.61□□□□□ -1.99
UBE2D3-233ENST00000618836 INTS1Q8N201 2190 aaKnown RBP2.61□□□□□ -1.99
UBE2D3-233ENST00000618836 IGKV1OR2-108A0A075B7D4 117 aa2.61□□□□□ -1.99
UBE2D3-233ENST00000618836 TLX1NBP0CAT3 122 aa2.61□□□□□ -1.99
UBE2D3-233ENST00000618836 KRTAP19-1Q8IUB9 90 aa2.61□□□□□ -1.99
UBE2D3-233ENST00000618836 SPANXA2-OT1Q8N9U9 137 aa2.61□□□□□ -1.99
UBE2D3-233ENST00000618836 TTTY12Q9BZ98 90 aa2.61□□□□□ -1.99
UBE2D3-233ENST00000618836 MTORP42345 2549 aa2.61□□□□□ -1.99
UBE2D3-233ENST00000618836 ARFGEF3Q5TH69 2177 aa2.61□□□□□ -1.99
UBE2D3-233ENST00000618836 ESPL1Q14674 2120 aa2.61□□□□□ -1.99
UBE2D3-233ENST00000618836 MDC1Q14676 2089 aaKnown RBP2.61□□□□□ -1.99
UBE2D3-233ENST00000618836 Q8TAT8 98 aa2.61□□□□□ -1.99
UBE2D3-233ENST00000618836 ARHGAP5-AS1Q96IT6 56 aa2.61□□□□□ -1.99
UBE2D3-233ENST00000618836 DEC1Q9P2X7 70 aa2.61□□□□□ -1.99
UBE2D3-233ENST00000618836 LRCOL1A6NCL2 159 aa2.6□□□□□ -1.99
UBE2D3-233ENST00000618836 KRTAP9-7A8MTY7 169 aa2.6□□□□□ -1.99
UBE2D3-233ENST00000618836 PANO1I0J062 215 aa2.6□□□□□ -1.99
UBE2D3-233ENST00000618836 NDUFA3O95167 84 aa2.6□□□□□ -1.99
UBE2D3-233ENST00000618836 IGKV1-17P01599 117 aa2.6□□□□□ -1.99
UBE2D3-233ENST00000618836 KRTAP4-2Q9BYR5 136 aa2.6□□□□□ -1.99
UBE2D3-233ENST00000618836 TIMM8BQ9Y5J9 83 aaPredicted RBP2.6□□□□□ -1.99
UBE2D3-233ENST00000618836 MALRD1Q5VYJ5 2156 aa2.6□□□□□ -1.99
UBE2D3-233ENST00000618836 IGHV1-3A0A0C4DH29 117 aa2.6□□□□□ -1.99
UBE2D3-233ENST00000618836 SUMO4Q6EEV6 95 aa2.6□□□□□ -1.99
UBE2D3-233ENST00000618836 ZGRF1Q86YA3 2104 aa2.6□□□□□ -1.99
UBE2D3-233ENST00000618836 FDCSPQ8NFU4 85 aa2.6□□□□□ -1.99
UBE2D3-233ENST00000618836 TMEM14AQ9Y6G1 99 aa2.6□□□□□ -1.99
UBE2D3-233ENST00000618836 P0C879 139 aa2.59□□□□□ -1.99
UBE2D3-233ENST00000618836 ZNF625Q96I27 306 aaPredicted RBP2.59□□□□□ -1.99
UBE2D3-233ENST00000618836 UBL5Q9BZL1 73 aa2.59□□□□□ -1.99
UBE2D3-233ENST00000618836 VWFP04275 2813 aa2.59□□□□□ -1.99
UBE2D3-233ENST00000618836 IGKV3D-11A0A0A0MRZ8 115 aa2.59□□□□□ -1.99
UBE2D3-233ENST00000618836 ODF3BA8MYP8 253 aa2.59□□□□□ -1.99
UBE2D3-233ENST00000618836 H7C2G1 150 aa2.59□□□□□ -1.99
UBE2D3-233ENST00000618836 PPP1R17O96001 155 aa2.59□□□□□ -1.99
UBE2D3-233ENST00000618836 ZNF137PP52743 207 aa2.59□□□□□ -1.99
UBE2D3-233ENST00000618836 WFDC9Q8NEX5 89 aa2.59□□□□□ -1.99
UBE2D3-233ENST00000618836 DEFB126Q9BYW3 111 aa2.59□□□□□ -1.99
UBE2D3-233ENST00000618836 ORMDL1Q9P0S3 153 aa2.59□□□□□ -1.99
UBE2D3-233ENST00000618836 SVEP1Q4LDE5 3571 aa2.59□□□□□ -2
UBE2D3-233ENST00000618836 IGKV3D-15A0A087WSY6 115 aa2.59□□□□□ -2
UBE2D3-233ENST00000618836 IGLV5-39A0A0G2JS06 123 aa2.59□□□□□ -2
UBE2D3-233ENST00000618836 CPSF4LA6NMK7 179 aaKnown RBP2.59□□□□□ -2
UBE2D3-233ENST00000618836 PLECQ15149 4684 aaKnown RBP2.59□□□□□ -2
UBE2D3-233ENST00000618836 NBEAL2Q6ZNJ1 2754 aa2.59□□□□□ -2
UBE2D3-233ENST00000618836 AHCTF1Q8WYP5 2266 aa2.58□□□□□ -2
UBE2D3-233ENST00000618836 DNAH11Q96DT5 4516 aa2.58□□□□□ -2
UBE2D3-233ENST00000618836 NDUFB1O75438 58 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms