RNA–Protein interactions for RNA: ENST00000618523.1

U6.48-201, humanhuman

BASIC

Gene U6, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U6.48-201ENST00000618523 DIP2BQ9P265 1576 aa0.74□□□□□ -2.29
U6.48-201ENST00000618523 SPINK1P00995 79 aa0.74□□□□□ -2.29
U6.48-201ENST00000618523 CHD9Q3L8U1 2897 aa0.74□□□□□ -2.29
U6.48-201ENST00000618523 CFDP00746 253 aaPredicted RBP0.73□□□□□ -2.29
U6.48-201ENST00000618523 SPRR1BP22528 89 aa0.73□□□□□ -2.29
U6.48-201ENST00000618523 BVES-AS1Q5T3Y7 98 aa0.73□□□□□ -2.29
U6.48-201ENST00000618523 ANK2Q01484 3957 aa0.72□□□□□ -2.29
U6.48-201ENST00000618523 PIEZO2Q9H5I5 2752 aa0.72□□□□□ -2.29
U6.48-201ENST00000618523 H3BUT2 72 aa0.72□□□□□ -2.29
U6.48-201ENST00000618523 SPRR1AP35321 89 aa0.72□□□□□ -2.29
U6.48-201ENST00000618523 DEFB121Q5J5C9 76 aa0.72□□□□□ -2.29
U6.48-201ENST00000618523 KDM5DQ9BY66 1539 aa0.71□□□□□ -2.3
U6.48-201ENST00000618523 PPRC1Q5VV67 1664 aaKnown RBP0.71□□□□□ -2.3
U6.48-201ENST00000618523 IGF2RP11717 2491 aa0.71□□□□□ -2.3
U6.48-201ENST00000618523 RGPD1P0DJD0 1748 aa0.7□□□□□ -2.3
U6.48-201ENST00000618523 UBR3Q6ZT12 1888 aa0.7□□□□□ -2.3
U6.48-201ENST00000618523 NKTRP30414 1462 aaKnown RBP0.7□□□□□ -2.3
U6.48-201ENST00000618523 SPTY2D1-AS1A0A0U1RR47 76 aa0.7□□□□□ -2.3
U6.48-201ENST00000618523 I3L3M4 83 aa0.7□□□□□ -2.3
U6.48-201ENST00000618523 COX7BP24311 80 aa0.7□□□□□ -2.3
U6.48-201ENST00000618523 USP24Q9UPU5 2620 aa0.7□□□□□ -2.3
U6.48-201ENST00000618523 TRAV21A0A0B4J279 112 aa0.69□□□□□ -2.3
U6.48-201ENST00000618523 CPSF4LA6NMK7 179 aaKnown RBP0.69□□□□□ -2.3
U6.48-201ENST00000618523 DEFB109BQ30KR1 87 aa0.69□□□□□ -2.3
U6.48-201ENST00000618523 GAFA1Q96PS6 74 aa0.69□□□□□ -2.3
U6.48-201ENST00000618523 RRBP1Q9P2E9 1410 aaKnown RBP0.69□□□□□ -2.3
U6.48-201ENST00000618523 FMN2Q9NZ56 1722 aa0.69□□□□□ -2.3
U6.48-201ENST00000618523 ABCC1P33527 1531 aa0.69□□□□□ -2.3
U6.48-201ENST00000618523 LRRC7Q96NW7 1537 aa0.69□□□□□ -2.3
U6.48-201ENST00000618523 TSC2P49815 1807 aa0.68□□□□□ -2.3
U6.48-201ENST00000618523 GVINP1Q7Z2Y8 2422 aa0.68□□□□□ -2.3
U6.48-201ENST00000618523 RGPD2P0DJD1 1756 aa0.68□□□□□ -2.3
U6.48-201ENST00000618523 NDUFB1O75438 58 aa0.68□□□□□ -2.3
U6.48-201ENST00000618523 KRTAP21-1Q3LI58 79 aa0.68□□□□□ -2.3
U6.48-201ENST00000618523 URB2Q14146 1524 aaKnown RBP0.67□□□□□ -2.3
U6.48-201ENST00000618523 QSER1Q2KHR3 1735 aa0.67□□□□□ -2.3
U6.48-201ENST00000618523 C18orf32Q8TCD1 76 aa0.66□□□□□ -2.3
U6.48-201ENST00000618523 U3KQA8 63 aa0.66□□□□□ -2.3
U6.48-201ENST00000618523 COL14A1Q05707 1796 aaKnown RBP0.65□□□□□ -2.3
U6.48-201ENST00000618523 ZFYVE26Q68DK2 2539 aa0.65□□□□□ -2.31
U6.48-201ENST00000618523 ATP5EP2Q5VTU8 51 aa0.65□□□□□ -2.31
U6.48-201ENST00000618523 MRPL34Q9BQ48 92 aaKnown RBP0.65□□□□□ -2.31
U6.48-201ENST00000618523 NAV2Q8IVL1 2488 aa0.65□□□□□ -2.31
U6.48-201ENST00000618523 CFAP74Q9C0B2 1584 aa0.65□□□□□ -2.31
U6.48-201ENST00000618523 MAP3K1Q13233 1512 aa0.64□□□□□ -2.31
U6.48-201ENST00000618523 CSMD3Q7Z407 3707 aa0.64□□□□□ -2.31
U6.48-201ENST00000618523 USP32Q8NFA0 1604 aa0.64□□□□□ -2.31
U6.48-201ENST00000618523 CLIP1P30622 1438 aa0.64□□□□□ -2.31
U6.48-201ENST00000618523 ANKARQ7Z5J8 1434 aa0.64□□□□□ -2.31
U6.48-201ENST00000618523 OTOGQ6ZRI0 2925 aa0.63□□□□□ -2.31
U6.48-201ENST00000618523 WFDC9Q8NEX5 89 aa0.63□□□□□ -2.31
U6.48-201ENST00000618523 DEFB105AQ8NG35 78 aa0.63□□□□□ -2.31
U6.48-201ENST00000618523 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.63□□□□□ -2.31
U6.48-201ENST00000618523 NCOA2Q15596 1464 aa0.62□□□□□ -2.31
U6.48-201ENST00000618523 CCL22O00626 93 aa0.62□□□□□ -2.31
U6.48-201ENST00000618523 SPINK4O60575 86 aa0.62□□□□□ -2.31
U6.48-201ENST00000618523 RPL38P63173 70 aaKnown RBP0.62□□□□□ -2.31
U6.48-201ENST00000618523 PTPN23Q9H3S7 1636 aa0.62□□□□□ -2.31
U6.48-201ENST00000618523 LTN1O94822 1766 aa0.61□□□□□ -2.31
U6.48-201ENST00000618523 APLNQ9ULZ1 77 aa0.61□□□□□ -2.31
U6.48-201ENST00000618523 PIK3C2BO00750 1634 aa0.6□□□□□ -2.31
U6.48-201ENST00000618523 CEP170BQ9Y4F5 1589 aaPredicted RBP0.6□□□□□ -2.31
U6.48-201ENST00000618523 RGPD8O14715 1765 aaPredicted RBP0.6□□□□□ -2.31
U6.48-201ENST00000618523 RGPD5Q99666 1765 aa0.6□□□□□ -2.31
U6.48-201ENST00000618523 ZNF831Q5JPB2 1677 aa0.59□□□□□ -2.31
U6.48-201ENST00000618523 UMAD1C9J7I0 102 aa0.59□□□□□ -2.31
U6.48-201ENST00000618523 IFI6P09912 130 aa0.59□□□□□ -2.31
U6.48-201ENST00000618523 MAGI3Q5TCQ9 1506 aa0.59□□□□□ -2.32
U6.48-201ENST00000618523 POLR1AO95602 1720 aaPredicted RBP0.58□□□□□ -2.32
U6.48-201ENST00000618523 UNC79Q9P2D8 2635 aa0.58□□□□□ -2.32
U6.48-201ENST00000618523 SMIM13P0DJ93 91 aa0.58□□□□□ -2.32
U6.48-201ENST00000618523 IFI27P40305 119 aaPredicted RBP0.58□□□□□ -2.32
U6.48-201ENST00000618523 BCORQ6W2J9 1755 aa0.57□□□□□ -2.32
U6.48-201ENST00000618523 NCOR1O75376 2440 aa0.57□□□□□ -2.32
U6.48-201ENST00000618523 A0A087WXM4 84 aa0.57□□□□□ -2.32
U6.48-201ENST00000618523 KLK9Q2XQG4 91 aa0.57□□□□□ -2.32
U6.48-201ENST00000618523 FXYD6Q9H0Q3 95 aa0.57□□□□□ -2.32
U6.48-201ENST00000618523 CNOT1A5YKK6 2376 aaKnown RBP0.57□□□□□ -2.32
U6.48-201ENST00000618523 VWFP04275 2813 aa0.57□□□□□ -2.32
U6.48-201ENST00000618523 ABCA8O94911 1581 aa0.57□□□□□ -2.32
U6.48-201ENST00000618523 SYNE1Q8NF91 8797 aaKnown RBP0.56□□□□□ -2.32
U6.48-201ENST00000618523 H1FX-AS1Q4G0G2 97 aa0.56□□□□□ -2.32
U6.48-201ENST00000618523 CSPG4Q6UVK1 2322 aa0.56□□□□□ -2.32
U6.48-201ENST00000618523 TENM4Q6N022 2769 aa0.55□□□□□ -2.32
U6.48-201ENST00000618523 LCE6AA0A183 80 aa0.55□□□□□ -2.32
U6.48-201ENST00000618523 COX6B2Q6YFQ2 88 aa0.55□□□□□ -2.32
U6.48-201ENST00000618523 DOT1LQ8TEK3 1739 aa0.55□□□□□ -2.32
U6.48-201ENST00000618523 CHD6Q8TD26 2715 aa0.54□□□□□ -2.32
U6.48-201ENST00000618523 SCN11AQ9UI33 1791 aa0.54□□□□□ -2.32
U6.48-201ENST00000618523 ARFGEF2Q9Y6D5 1785 aa0.54□□□□□ -2.32
U6.48-201ENST00000618523 CCDC88BA6NC98 1476 aa0.54□□□□□ -2.32
U6.48-201ENST00000618523 PREX1Q8TCU6 1659 aa0.53□□□□□ -2.32
U6.48-201ENST00000618523 TIAM2Q8IVF5 1701 aa0.53□□□□□ -2.32
U6.48-201ENST00000618523 SPTA1P02549 2419 aa0.53□□□□□ -2.32
U6.48-201ENST00000618523 HMGA1P17096 107 aaKnown RBP0.53□□□□□ -2.32
U6.48-201ENST00000618523 SMCO4Q9NRQ5 59 aa0.53□□□□□ -2.32
U6.48-201ENST00000618523 CDKN2A-AS1Q9UH64 79 aa0.53□□□□□ -2.32
U6.48-201ENST00000618523 LRP1Q07954 4544 aaKnown RBP0.52□□□□□ -2.33
U6.48-201ENST00000618523 WNK2Q9Y3S1 2297 aa0.52□□□□□ -2.33
U6.48-201ENST00000618523 NREPQ16612 68 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms