RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 PRLHP81277 87 aa7.38□□□□□ -1.23
CLTCL1-209ENST00000617103 ANKRD11Q6UB99 2663 aaPredicted RBP7.38□□□□□ -1.23
CLTCL1-209ENST00000617103 SMCR5Q8TEV8 140 aa7.38□□□□□ -1.23
CLTCL1-209ENST00000617103 FHL3Q13643 280 aa7.38□□□□□ -1.23
CLTCL1-209ENST00000617103 ELOF1P60002 83 aaKnown RBP7.37□□□□□ -1.23
CLTCL1-209ENST00000617103 LRRK2Q5S007 2527 aa7.37□□□□□ -1.23
CLTCL1-209ENST00000617103 NHLRC4P0CG21 123 aaPredicted RBP7.37□□□□□ -1.23
CLTCL1-209ENST00000617103 H3BPC8 53 aa7.36□□□□□ -1.23
CLTCL1-209ENST00000617103 TP53AIP1Q9HCN2 124 aa7.36□□□□□ -1.23
CLTCL1-209ENST00000617103 C6orf48Q9UBA6 75 aa7.36□□□□□ -1.23
CLTCL1-209ENST00000617103 SPINK1P00995 79 aa7.36□□□□□ -1.23
CLTCL1-209ENST00000617103 KRTAP10-9P60411 292 aa7.36□□□□□ -1.23
CLTCL1-209ENST00000617103 Q8NBF4 154 aa7.35□□□□□ -1.23
CLTCL1-209ENST00000617103 MTORP42345 2549 aa7.35□□□□□ -1.23
CLTCL1-209ENST00000617103 LINC01556Q5JQF7 62 aa7.35□□□□□ -1.23
CLTCL1-209ENST00000617103 CENPFP49454 3210 aa7.35□□□□□ -1.23
CLTCL1-209ENST00000617103 RETNLBQ9BQ08 111 aa7.34□□□□□ -1.23
CLTCL1-209ENST00000617103 A0A1B0GU69 56 aa7.33□□□□□ -1.24
CLTCL1-209ENST00000617103 LINC00167Q96N53 147 aa7.33□□□□□ -1.24
CLTCL1-209ENST00000617103 ERC2-IT1O76042 136 aa7.32□□□□□ -1.24
CLTCL1-209ENST00000617103 SPAG11AQ6PDA7 123 aa7.32□□□□□ -1.24
CLTCL1-209ENST00000617103 ACYP2P14621 99 aa7.31□□□□□ -1.24
CLTCL1-209ENST00000617103 KLK9Q2XQG4 91 aa7.3□□□□□ -1.24
CLTCL1-209ENST00000617103 TRAV22A0A0B4J277 110 aa7.3□□□□□ -1.24
CLTCL1-209ENST00000617103 SMR3AQ99954 134 aa7.3□□□□□ -1.24
CLTCL1-209ENST00000617103 F8P00451 2351 aa7.29□□□□□ -1.24
CLTCL1-209ENST00000617103 Q6ZRX8 168 aa7.29□□□□□ -1.24
CLTCL1-209ENST00000617103 X6R8D5 127 aa7.29□□□□□ -1.24
CLTCL1-209ENST00000617103 EP400Q96L91 3159 aa7.29□□□□□ -1.24
CLTCL1-209ENST00000617103 LY6G6CO95867 125 aa7.29□□□□□ -1.24
CLTCL1-209ENST00000617103 NUPR2A6NF83 97 aa7.29□□□□□ -1.24
CLTCL1-209ENST00000617103 LINC00476Q8WZB0 136 aa7.28□□□□□ -1.24
CLTCL1-209ENST00000617103 KLKP1Q107X0 134 aa7.28□□□□□ -1.24
CLTCL1-209ENST00000617103 SERTAD4-AS1Q5TG53 156 aa7.28□□□□□ -1.24
CLTCL1-209ENST00000617103 IGLV5-52A0A0A0MRZ9 124 aa7.27□□□□□ -1.25
CLTCL1-209ENST00000617103 IGKV2D-30A0A075B6S6 120 aa7.27□□□□□ -1.25
CLTCL1-209ENST00000617103 EIF4EBP3O60516 100 aaPredicted RBP7.27□□□□□ -1.25
CLTCL1-209ENST00000617103 IGKV2-30P06310 120 aa7.27□□□□□ -1.25
CLTCL1-209ENST00000617103 FSHBP01225 129 aa7.26□□□□□ -1.25
CLTCL1-209ENST00000617103 IGLV6-57P01721 117 aa7.26□□□□□ -1.25
CLTCL1-209ENST00000617103 GVQW2A0A096LPI5 108 aaPredicted RBP7.25□□□□□ -1.25
CLTCL1-209ENST00000617103 TRBV7-4A0A0J9YYF1 115 aa7.25□□□□□ -1.25
CLTCL1-209ENST00000617103 A8MUN3 132 aa7.25□□□□□ -1.25
CLTCL1-209ENST00000617103 SPTBN4Q9H254 2564 aa7.24□□□□□ -1.25
CLTCL1-209ENST00000617103 C8orf87E5RJ46 101 aa7.24□□□□□ -1.25
CLTCL1-209ENST00000617103 ATP11AUNQ6ZP68 121 aa7.24□□□□□ -1.25
CLTCL1-209ENST00000617103 LINC00336Q6ZUF6 198 aa7.24□□□□□ -1.25
CLTCL1-209ENST00000617103 CYP4F30PQ9H0H9 118 aa7.24□□□□□ -1.25
CLTCL1-209ENST00000617103 H3BNG1 76 aa7.23□□□□□ -1.25
CLTCL1-209ENST00000617103 C7orf65Q6ZTY9 151 aa7.23□□□□□ -1.25
CLTCL1-209ENST00000617103 ST20-AS1Q8NBB2 130 aa7.23□□□□□ -1.25
CLTCL1-209ENST00000617103 VPREB1P12018 145 aa7.22□□□□□ -1.25
CLTCL1-209ENST00000617103 H7BZZ5 65 aa7.22□□□□□ -1.25
CLTCL1-209ENST00000617103 MOBPQ13875 183 aa7.21□□□□□ -1.25
CLTCL1-209ENST00000617103 POLQO75417 2590 aa7.21□□□□□ -1.26
CLTCL1-209ENST00000617103 CHD8Q9HCK8 2581 aa7.2□□□□□ -1.26
CLTCL1-209ENST00000617103 K7EQZ3 153 aa7.2□□□□□ -1.26
CLTCL1-209ENST00000617103 RPL37AP61513 92 aaKnown RBP7.2□□□□□ -1.26
CLTCL1-209ENST00000617103 COA5Q86WW8 74 aa7.18□□□□□ -1.26
CLTCL1-209ENST00000617103 LINC00528Q8N1L1 170 aa7.17□□□□□ -1.26
CLTCL1-209ENST00000617103 LOC101927531A0A1B0GV80 90 aa7.17□□□□□ -1.26
CLTCL1-209ENST00000617103 A8MWP4 228 aa7.17□□□□□ -1.26
CLTCL1-209ENST00000617103 Q6ZRP5 223 aa7.17□□□□□ -1.26
CLTCL1-209ENST00000617103 COL27A1Q8IZC6 1860 aaPredicted RBP7.17□□□□□ -1.26
CLTCL1-209ENST00000617103 EPM2AB3EWF7 344 aa7.17□□□□□ -1.26
CLTCL1-209ENST00000617103 C1orf134Q5TEV5 83 aa7.16□□□□□ -1.26
CLTCL1-209ENST00000617103 ACANP16112 2415 aa7.16□□□□□ -1.26
CLTCL1-209ENST00000617103 CD164Q04900 197 aa7.15□□□□□ -1.27
CLTCL1-209ENST00000617103 PHF5AQ7RTV0 110 aaKnown RBP7.15□□□□□ -1.27
CLTCL1-209ENST00000617103 KCNQ1DNQ9H478 68 aa7.15□□□□□ -1.27
CLTCL1-209ENST00000617103 C16orf90A8MZG2 172 aa7.14□□□□□ -1.27
CLTCL1-209ENST00000617103 Q8NAQ8 132 aa7.13□□□□□ -1.27
CLTCL1-209ENST00000617103 SPACA4Q8TDM5 124 aa7.13□□□□□ -1.27
CLTCL1-209ENST00000617103 ANKRD17O75179 2603 aaKnown RBP7.13□□□□□ -1.27
CLTCL1-209ENST00000617103 LINC00313P59037 77 aa7.12□□□□□ -1.27
CLTCL1-209ENST00000617103 IGLV8-61A0A075B6I0 122 aa7.11□□□□□ -1.27
CLTCL1-209ENST00000617103 MRPL34Q9BQ48 92 aaKnown RBP7.11□□□□□ -1.27
CLTCL1-209ENST00000617103 C9orf129Q5T035 196 aaKnown RBP7.11□□□□□ -1.27
CLTCL1-209ENST00000617103 LINC01600Q96MT4 127 aa7.11□□□□□ -1.27
CLTCL1-209ENST00000617103 UQCR11O14957 56 aa7.11□□□□□ -1.27
CLTCL1-209ENST00000617103 IGLV1-50A0A075B6I6 118 aa7.1□□□□□ -1.27
CLTCL1-209ENST00000617103 FAM229AH3BQW9 127 aa7.1□□□□□ -1.27
CLTCL1-209ENST00000617103 PRR15Q8IV56 129 aa7.1□□□□□ -1.27
CLTCL1-209ENST00000617103 PRRC2CQ9Y520 2896 aaKnown RBP7.09□□□□□ -1.27
CLTCL1-209ENST00000617103 Q8N377 158 aa7.09□□□□□ -1.28
CLTCL1-209ENST00000617103 IGFL1Q6UW32 110 aa7.08□□□□□ -1.28
CLTCL1-209ENST00000617103 FAM168BA1KXE4 195 aa7.08□□□□□ -1.28
CLTCL1-209ENST00000617103 CSNK1G2-AS1Q8NCQ2 148 aa7.08□□□□□ -1.28
CLTCL1-209ENST00000617103 KTN1-AS1Q86SY8 53 aa7.07□□□□□ -1.28
CLTCL1-209ENST00000617103 MDFIQ99750 246 aa7.07□□□□□ -1.28
CLTCL1-209ENST00000617103 PRR34Q9NV39 138 aa7.07□□□□□ -1.28
CLTCL1-209ENST00000617103 LINC00588Q9Y4M8 146 aa7.07□□□□□ -1.28
CLTCL1-209ENST00000617103 DNAH10OSP0CZ25 163 aa7.07□□□□□ -1.28
CLTCL1-209ENST00000617103 WIPF1O43516 503 aa7.06□□□□□ -1.28
CLTCL1-209ENST00000617103 OBSCN-AS1Q96MR7 158 aa7.05□□□□□ -1.28
CLTCL1-209ENST00000617103 CHTF8P0CG12 524 aa7.05□□□□□ -1.28
CLTCL1-209ENST00000617103 FASNP49327 2511 aaKnown RBP7.04□□□□□ -1.28
CLTCL1-209ENST00000617103 SPINT4Q6UDR6 99 aa7.04□□□□□ -1.28
CLTCL1-209ENST00000617103 C8orf17Q9NRJ1 99 aa7.04□□□□□ -1.28
CLTCL1-209ENST00000617103 COL4A2P08572 1712 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms