RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 ITPR2Q14571 2701 aa9.07□□□□□ -0.96
PPP4R3B-206ENST00000616407 ESRGQ1W209 222 aa9.06□□□□□ -0.96
PPP4R3B-206ENST00000616407 HIGD2AQ9BW72 106 aa9.06□□□□□ -0.96
PPP4R3B-206ENST00000616407 UBR5O95071 2799 aaPredicted RBP9.06□□□□□ -0.96
PPP4R3B-206ENST00000616407 RPL37AP8A6NKH3 93 aa9.06□□□□□ -0.96
PPP4R3B-206ENST00000616407 CDIP1Q9H305 208 aa9.06□□□□□ -0.96
PPP4R3B-206ENST00000616407 FAM240AA0A1B0GVK7 77 aa9.05□□□□□ -0.96
PPP4R3B-206ENST00000616407 M0QXV9 152 aa9.05□□□□□ -0.96
PPP4R3B-206ENST00000616407 C10orf25Q5T742 122 aa9.05□□□□□ -0.96
PPP4R3B-206ENST00000616407 NBEAL2Q6ZNJ1 2754 aa9.05□□□□□ -0.96
PPP4R3B-206ENST00000616407 Q6ZRU5 148 aa9.04□□□□□ -0.96
PPP4R3B-206ENST00000616407 FAM218AQ96MZ4 157 aa9.04□□□□□ -0.96
PPP4R3B-206ENST00000616407 UBE2AP49459 152 aa9.04□□□□□ -0.96
PPP4R3B-206ENST00000616407 C14orf177Q52M58 125 aa9.04□□□□□ -0.96
PPP4R3B-206ENST00000616407 SPATA3Q8NHX4 192 aa9.04□□□□□ -0.96
PPP4R3B-206ENST00000616407 NDUFC2-KCTD14E9PQ53 114 aa9.03□□□□□ -0.96
PPP4R3B-206ENST00000616407 USP17L23D6RBM5 183 aa9.03□□□□□ -0.96
PPP4R3B-206ENST00000616407 FAM19A3Q7Z5A8 133 aa9.03□□□□□ -0.96
PPP4R3B-206ENST00000616407 CRYBG3Q68DQ2 2970 aa9.03□□□□□ -0.96
PPP4R3B-206ENST00000616407 PKIGQ9Y2B9 76 aa9.02□□□□□ -0.97
PPP4R3B-206ENST00000616407 ENHOQ6UWT2 76 aa9.02□□□□□ -0.97
PPP4R3B-206ENST00000616407 SCXQ7RTU7 201 aa9.02□□□□□ -0.97
PPP4R3B-206ENST00000616407 ASH1LQ9NR48 2969 aaKnown RBP9.02□□□□□ -0.97
PPP4R3B-206ENST00000616407 FAM19A1Q7Z5A9 133 aa9.01□□□□□ -0.97
PPP4R3B-206ENST00000616407 UPK3BQ9BT76 320 aa9.01□□□□□ -0.97
PPP4R3B-206ENST00000616407 SVIPQ8NHG7 77 aa9.01□□□□□ -0.97
PPP4R3B-206ENST00000616407 DCHS2Q6V1P9 2916 aa9.01□□□□□ -0.97
PPP4R3B-206ENST00000616407 CCKP06307 115 aa9.01□□□□□ -0.97
PPP4R3B-206ENST00000616407 LINC00612Q8N6U2 182 aa9.01□□□□□ -0.97
PPP4R3B-206ENST00000616407 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9□□□□□ -0.97
PPP4R3B-206ENST00000616407 CDK2AP2O75956 126 aa9□□□□□ -0.97
PPP4R3B-206ENST00000616407 IMUPQ9GZP8 106 aa9□□□□□ -0.97
PPP4R3B-206ENST00000616407 C2orf48Q96LS8 159 aa9□□□□□ -0.97
PPP4R3B-206ENST00000616407 M0R2N4 97 aa8.99□□□□□ -0.97
PPP4R3B-206ENST00000616407 FAM104AQ969W3 186 aa8.99□□□□□ -0.97
PPP4R3B-206ENST00000616407 C6orf48Q9UBA6 75 aa8.99□□□□□ -0.97
PPP4R3B-206ENST00000616407 APCP25054 2843 aa8.99□□□□□ -0.97
PPP4R3B-206ENST00000616407 LOC107984640A0A0U1RRK4 108 aa8.99□□□□□ -0.97
PPP4R3B-206ENST00000616407 LINC01556Q5JQF7 62 aa8.98□□□□□ -0.97
PPP4R3B-206ENST00000616407 H3BNG1 76 aa8.98□□□□□ -0.97
PPP4R3B-206ENST00000616407 LINC00575Q6W349 94 aa8.98□□□□□ -0.97
PPP4R3B-206ENST00000616407 COL6A5A8TX70 2615 aa8.97□□□□□ -0.97
PPP4R3B-206ENST00000616407 KRTAP10-11P60412 298 aa8.97□□□□□ -0.97
PPP4R3B-206ENST00000616407 NOTCH1P46531 2555 aa8.97□□□□□ -0.97
PPP4R3B-206ENST00000616407 A0A096LNI7 61 aa8.97□□□□□ -0.97
PPP4R3B-206ENST00000616407 C3orf84H3BNL1 204 aa8.96□□□□□ -0.97
PPP4R3B-206ENST00000616407 BPY2O14599 106 aa8.96□□□□□ -0.97
PPP4R3B-206ENST00000616407 ATP5EP2Q5VTU8 51 aa8.96□□□□□ -0.98
PPP4R3B-206ENST00000616407 Q6Q795 121 aa8.96□□□□□ -0.98
PPP4R3B-206ENST00000616407 DHRS4-AS1Q9P1J3 65 aa8.95□□□□□ -0.98
PPP4R3B-206ENST00000616407 LINC00846Q9NV44 126 aa8.94□□□□□ -0.98
PPP4R3B-206ENST00000616407 STAB1Q9NY15 2570 aa8.94□□□□□ -0.98
PPP4R3B-206ENST00000616407 CCDC179H3BU77 68 aa8.93□□□□□ -0.98
PPP4R3B-206ENST00000616407 UQCRQO14949 82 aa8.93□□□□□ -0.98
PPP4R3B-206ENST00000616407 CELSR2Q9HCU4 2923 aa8.93□□□□□ -0.98
PPP4R3B-206ENST00000616407 Q6JHZ5 121 aa8.93□□□□□ -0.98
PPP4R3B-206ENST00000616407 SMIM20Q8N5G0 67 aa8.93□□□□□ -0.98
PPP4R3B-206ENST00000616407 A0A087WVE0 104 aa8.92□□□□□ -0.98
PPP4R3B-206ENST00000616407 KIAA0087Q14695 138 aa8.92□□□□□ -0.98
PPP4R3B-206ENST00000616407 B9D2Q9BPU9 175 aa8.91□□□□□ -0.98
PPP4R3B-206ENST00000616407 PPDPFQ9H3Y8 114 aa8.91□□□□□ -0.98
PPP4R3B-206ENST00000616407 C20orf197Q8N268 126 aa8.9□□□□□ -0.98
PPP4R3B-206ENST00000616407 NF1P21359 2839 aa8.9□□□□□ -0.98
PPP4R3B-206ENST00000616407 F8WDY8 70 aa8.9□□□□□ -0.98
PPP4R3B-206ENST00000616407 C3orf22Q8N5N4 141 aa8.89□□□□□ -0.99
PPP4R3B-206ENST00000616407 PRR34Q9NV39 138 aa8.88□□□□□ -0.99
PPP4R3B-206ENST00000616407 LINC00588Q9Y4M8 146 aa8.88□□□□□ -0.99
PPP4R3B-206ENST00000616407 NUPR2A6NF83 97 aa8.86□□□□□ -0.99
PPP4R3B-206ENST00000616407 MRPL55Q7Z7F7 128 aaKnown RBP8.86□□□□□ -0.99
PPP4R3B-206ENST00000616407 C7orf33Q8WU49 177 aa8.86□□□□□ -0.99
PPP4R3B-206ENST00000616407 SMG1Q96Q15 3661 aaKnown RBP8.86□□□□□ -0.99
PPP4R3B-206ENST00000616407 SERP2Q8N6R1 65 aa8.86□□□□□ -0.99
PPP4R3B-206ENST00000616407 FBN2P35556 2912 aa8.85□□□□□ -0.99
PPP4R3B-206ENST00000616407 REG3GQ6UW15 175 aa8.85□□□□□ -0.99
PPP4R3B-206ENST00000616407 C22orf24Q9Y442 160 aa8.85□□□□□ -0.99
PPP4R3B-206ENST00000616407 COX7CP15954 63 aa8.84□□□□□ -0.99
PPP4R3B-206ENST00000616407 GVQW2A0A096LPI5 108 aaPredicted RBP8.84□□□□□ -0.99
PPP4R3B-206ENST00000616407 NDUFB1O75438 58 aa8.83□□□□□ -1
PPP4R3B-206ENST00000616407 TRBV7-7A0A0K0K1E9 115 aa8.83□□□□□ -1
PPP4R3B-206ENST00000616407 C1orf137Q5JT78 98 aa8.83□□□□□ -1
PPP4R3B-206ENST00000616407 Q6ZRP5 223 aa8.82□□□□□ -1
PPP4R3B-206ENST00000616407 K7EIL1 84 aa8.82□□□□□ -1
PPP4R3B-206ENST00000616407 LY6G6CO95867 125 aa8.82□□□□□ -1
PPP4R3B-206ENST00000616407 DNAH10OSP0CZ25 163 aa8.82□□□□□ -1
PPP4R3B-206ENST00000616407 H0Y9J4 135 aa8.82□□□□□ -1
PPP4R3B-206ENST00000616407 NDUFS5O43920 106 aa8.82□□□□□ -1
PPP4R3B-206ENST00000616407 PRYO14603 147 aa8.81□□□□□ -1
PPP4R3B-206ENST00000616407 LINC00167Q96N53 147 aa8.81□□□□□ -1
PPP4R3B-206ENST00000616407 Q6ZVQ6 151 aa8.81□□□□□ -1
PPP4R3B-206ENST00000616407 MXRA5Q9NR99 2828 aa8.8□□□□□ -1
PPP4R3B-206ENST00000616407 VPREB1P12018 145 aa8.8□□□□□ -1
PPP4R3B-206ENST00000616407 IGLV6-57P01721 117 aa8.8□□□□□ -1
PPP4R3B-206ENST00000616407 HIVEP1P15822 2718 aa8.8□□□□□ -1
PPP4R3B-206ENST00000616407 ELOF1P60002 83 aaKnown RBP8.8□□□□□ -1
PPP4R3B-206ENST00000616407 LINC00474Q9P2X8 69 aa8.79□□□□□ -1
PPP4R3B-206ENST00000616407 PRLHP81277 87 aa8.79□□□□□ -1
PPP4R3B-206ENST00000616407 C15orf56Q8N910 161 aa8.78□□□□□ -1
PPP4R3B-206ENST00000616407 MP68P56378 58 aa8.77□□□□□ -1.01
PPP4R3B-206ENST00000616407 J3KT08 172 aa8.77□□□□□ -1.01
PPP4R3B-206ENST00000616407 MDFIQ99750 246 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms