RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 GAGE12HA6NDE8 117 aa11.38□□□□□ -0.59
TRAPPC3-209ENST00000616395 MEIG1Q5JSS6 88 aa11.38□□□□□ -0.59
TRAPPC3-209ENST00000616395 Q8IZM0 81 aa11.38□□□□□ -0.59
TRAPPC3-209ENST00000616395 TNXBP22105 4242 aa11.37□□□□□ -0.59
TRAPPC3-209ENST00000616395 CKS1BP61024 79 aa11.37□□□□□ -0.59
TRAPPC3-209ENST00000616395 RPL24P83731 157 aaKnown RBP11.36□□□□□ -0.59
TRAPPC3-209ENST00000616395 ENHOQ6UWT2 76 aa11.36□□□□□ -0.59
TRAPPC3-209ENST00000616395 IFITM1P13164 125 aa11.35□□□□□ -0.59
TRAPPC3-209ENST00000616395 COX11Q9Y6N1 276 aa11.35□□□□□ -0.59
TRAPPC3-209ENST00000616395 SMIM13P0DJ93 91 aa11.35□□□□□ -0.59
TRAPPC3-209ENST00000616395 FOXI1Q12951 378 aa11.34□□□□□ -0.59
TRAPPC3-209ENST00000616395 SPANXDQ9BXN6 97 aa11.34□□□□□ -0.59
TRAPPC3-209ENST00000616395 SPANXCQ9NY87 97 aa11.34□□□□□ -0.59
TRAPPC3-209ENST00000616395 IGKV2D-24A0A075B6R9 120 aa11.32□□□□□ -0.6
TRAPPC3-209ENST00000616395 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC3-209ENST00000616395 Q6ZRU5 148 aa11.32□□□□□ -0.6
TRAPPC3-209ENST00000616395 ZNF625Q96I27 306 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC3-209ENST00000616395 F8WDY8 70 aa11.3□□□□□ -0.6
TRAPPC3-209ENST00000616395 SPAG11BQ08648 103 aa11.3□□□□□ -0.6
TRAPPC3-209ENST00000616395 ZNF561-AS1K7EIQ3 104 aa11.29□□□□□ -0.6
TRAPPC3-209ENST00000616395 NHP2Q9NX24 153 aaKnown RBP11.29□□□□□ -0.6
TRAPPC3-209ENST00000616395 FXYD2P54710 66 aa11.28□□□□□ -0.6
TRAPPC3-209ENST00000616395 PPDPFQ9H3Y8 114 aa11.28□□□□□ -0.6
TRAPPC3-209ENST00000616395 LINC00158P58513 81 aa11.27□□□□□ -0.61
TRAPPC3-209ENST00000616395 COX17Q14061 63 aa11.27□□□□□ -0.61
TRAPPC3-209ENST00000616395 MUSTN1Q8IVN3 82 aa11.26□□□□□ -0.61
TRAPPC3-209ENST00000616395 RAB37Q96AX2 223 aa11.26□□□□□ -0.61
TRAPPC3-209ENST00000616395 KRTAP9-2Q9BYQ4 174 aa11.26□□□□□ -0.61
TRAPPC3-209ENST00000616395 LCE2DQ5TA82 110 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC3-209ENST00000616395 ERG28Q9UKR5 140 aa11.25□□□□□ -0.61
TRAPPC3-209ENST00000616395 LITAFQ99732 161 aa11.24□□□□□ -0.61
TRAPPC3-209ENST00000616395 C2orf48Q96LS8 159 aa11.23□□□□□ -0.61
TRAPPC3-209ENST00000616395 LYRM7Q5U5X0 104 aa11.22□□□□□ -0.61
TRAPPC3-209ENST00000616395 A0A0B4J2C4 111 aa11.21□□□□□ -0.61
TRAPPC3-209ENST00000616395 A0A0U1RRA0 63 aa11.21□□□□□ -0.61
TRAPPC3-209ENST00000616395 A0A1B0GWB2 263 aa11.21□□□□□ -0.61
TRAPPC3-209ENST00000616395 A4D1N5 150 aa11.21□□□□□ -0.61
TRAPPC3-209ENST00000616395 KIAA0087Q14695 138 aa11.21□□□□□ -0.61
TRAPPC3-209ENST00000616395 LINC00308Q8TCZ7 52 aa11.21□□□□□ -0.61
TRAPPC3-209ENST00000616395 CAMK2N2Q96S95 79 aa11.21□□□□□ -0.61
TRAPPC3-209ENST00000616395 C9orf118A6NHY6 69 aa11.2□□□□□ -0.62
TRAPPC3-209ENST00000616395 PFN2P35080 140 aa11.2□□□□□ -0.62
TRAPPC3-209ENST00000616395 ADAMTSL4-AS1Q5T5F5 129 aa11.2□□□□□ -0.62
TRAPPC3-209ENST00000616395 PRO1854Q9UHT4 67 aa11.2□□□□□ -0.62
TRAPPC3-209ENST00000616395 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC3-209ENST00000616395 TRBV30A0A0K0K1B3 111 aa11.19□□□□□ -0.62
TRAPPC3-209ENST00000616395 TAX1BP3O14907 124 aa11.19□□□□□ -0.62
TRAPPC3-209ENST00000616395 MIR7-3HGQ8N6C7 128 aa11.19□□□□□ -0.62
TRAPPC3-209ENST00000616395 GVQW2A0A096LPI5 108 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC3-209ENST00000616395 A0A1B0GV90 55 aa11.18□□□□□ -0.62
TRAPPC3-209ENST00000616395 PANO1I0J062 215 aa11.18□□□□□ -0.62
TRAPPC3-209ENST00000616395 KRTAP26-1Q6PEX3 210 aa11.18□□□□□ -0.62
TRAPPC3-209ENST00000616395 C2orf82Q6UX34 121 aa11.18□□□□□ -0.62
TRAPPC3-209ENST00000616395 NPC2P61916 151 aa11.17□□□□□ -0.62
TRAPPC3-209ENST00000616395 VAMP3Q15836 100 aa11.17□□□□□ -0.62
TRAPPC3-209ENST00000616395 USP17L23D6RBM5 183 aa11.16□□□□□ -0.62
TRAPPC3-209ENST00000616395 FABP2P12104 132 aa11.16□□□□□ -0.62
TRAPPC3-209ENST00000616395 C14orf177Q52M58 125 aa11.16□□□□□ -0.62
TRAPPC3-209ENST00000616395 DAND5Q8N907 189 aa11.16□□□□□ -0.62
TRAPPC3-209ENST00000616395 Q1RN00 199 aa11.15□□□□□ -0.62
TRAPPC3-209ENST00000616395 HIGD2BQ4VC39 106 aa11.15□□□□□ -0.62
TRAPPC3-209ENST00000616395 GTF2H5Q6ZYL4 71 aa11.15□□□□□ -0.62
TRAPPC3-209ENST00000616395 H3BUT2 72 aa11.14□□□□□ -0.63
TRAPPC3-209ENST00000616395 CFC1BP0CG36 223 aa11.14□□□□□ -0.63
TRAPPC3-209ENST00000616395 CFC1P0CG37 223 aa11.14□□□□□ -0.63
TRAPPC3-209ENST00000616395 LINC01600Q96MT4 127 aa11.14□□□□□ -0.63
TRAPPC3-209ENST00000616395 TRAV13-2A0A0B4J235 113 aa11.13□□□□□ -0.63
TRAPPC3-209ENST00000616395 K7ERJ3 54 aa11.13□□□□□ -0.63
TRAPPC3-209ENST00000616395 UNQ6190/PRO20217Q6UXQ8 127 aa11.13□□□□□ -0.63
TRAPPC3-209ENST00000616395 C15orf56Q8N910 161 aa11.13□□□□□ -0.63
TRAPPC3-209ENST00000616395 SND1-IT1Q9HBX3 110 aa11.13□□□□□ -0.63
TRAPPC3-209ENST00000616395 PSMB2P49721 201 aa11.12□□□□□ -0.63
TRAPPC3-209ENST00000616395 SYCNQ0VAF6 134 aa11.12□□□□□ -0.63
TRAPPC3-209ENST00000616395 KRTAP9-6A0A140TA67 174 aa11.11□□□□□ -0.63
TRAPPC3-209ENST00000616395 COX6CP09669 75 aa11.11□□□□□ -0.63
TRAPPC3-209ENST00000616395 C9orf163Q8N9P6 203 aa11.11□□□□□ -0.63
TRAPPC3-209ENST00000616395 PKIGQ9Y2B9 76 aa11.11□□□□□ -0.63
TRAPPC3-209ENST00000616395 A0A1W2PPM0 123 aa11.1□□□□□ -0.63
TRAPPC3-209ENST00000616395 RNF151Q2KHN1 245 aa11.1□□□□□ -0.63
TRAPPC3-209ENST00000616395 LOC107984156A0A0G2JMH3 177 aa11.09□□□□□ -0.63
TRAPPC3-209ENST00000616395 SDIM1Q6ZPB5 146 aa11.09□□□□□ -0.63
TRAPPC3-209ENST00000616395 ARL17AQ8IVW1 177 aa11.09□□□□□ -0.63
TRAPPC3-209ENST00000616395 CARD19Q96LW7 228 aa11.09□□□□□ -0.63
TRAPPC3-209ENST00000616395 GAGE10A6NGK3 116 aa11.09□□□□□ -0.63
TRAPPC3-209ENST00000616395 NDUFC2O95298 119 aa11.09□□□□□ -0.63
TRAPPC3-209ENST00000616395 SCGB1C2P0DMR2 95 aa11.09□□□□□ -0.63
TRAPPC3-209ENST00000616395 TSPAN13O95857 204 aa11.08□□□□□ -0.64
TRAPPC3-209ENST00000616395 LINC00526Q96FQ7 95 aa11.08□□□□□ -0.64
TRAPPC3-209ENST00000616395 C6orf48Q9UBA6 75 aa11.08□□□□□ -0.64
TRAPPC3-209ENST00000616395 LPAP08519 4548 aa11.07□□□□□ -0.64
TRAPPC3-209ENST00000616395 NDUFC2-KCTD14E9PQ53 114 aa11.07□□□□□ -0.64
TRAPPC3-209ENST00000616395 H7C2G1 150 aa11.07□□□□□ -0.64
TRAPPC3-209ENST00000616395 RPL13AP40429 203 aaKnown RBP11.07□□□□□ -0.64
TRAPPC3-209ENST00000616395 C10orf25Q5T742 122 aa11.07□□□□□ -0.64
TRAPPC3-209ENST00000616395 CBY1Q9Y3M2 126 aa11.07□□□□□ -0.64
TRAPPC3-209ENST00000616395 SOSTDC1Q6X4U4 206 aa11.06□□□□□ -0.64
TRAPPC3-209ENST00000616395 SPCS1Q9Y6A9 102 aa11.06□□□□□ -0.64
TRAPPC3-209ENST00000616395 TRBV20-1A0A075B6N2 111 aa11.05□□□□□ -0.64
TRAPPC3-209ENST00000616395 KRTAP10-8P60410 259 aa11.05□□□□□ -0.64
TRAPPC3-209ENST00000616395 C9orf116Q5BN46 136 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms