RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 ATP5EP56381 51 aaPredicted RBP6.47□□□□□ -1.37
CLTCL1-208ENST00000615606 DNAH10OSP0CZ25 163 aa6.47□□□□□ -1.37
CLTCL1-208ENST00000615606 FAM19A3Q7Z5A8 133 aa6.47□□□□□ -1.37
CLTCL1-208ENST00000615606 Q6JHZ5 121 aa6.47□□□□□ -1.37
CLTCL1-208ENST00000615606 ITPR3Q14573 2671 aa6.46□□□□□ -1.38
CLTCL1-208ENST00000615606 CASC2Q6XLA1 102 aa6.46□□□□□ -1.38
CLTCL1-208ENST00000615606 SNURFQ9Y675 71 aa6.46□□□□□ -1.38
CLTCL1-208ENST00000615606 WFDC13Q8IUB5 93 aa6.45□□□□□ -1.38
CLTCL1-208ENST00000615606 CFAP46Q8IYW2 2715 aa6.45□□□□□ -1.38
CLTCL1-208ENST00000615606 C6orf48Q9UBA6 75 aa6.45□□□□□ -1.38
CLTCL1-208ENST00000615606 USP24Q9UPU5 2620 aa6.45□□□□□ -1.38
CLTCL1-208ENST00000615606 MKI67P46013 3256 aaKnown RBP6.45□□□□□ -1.38
CLTCL1-208ENST00000615606 TM2D3Q9BRN9 247 aa6.45□□□□□ -1.38
CLTCL1-208ENST00000615606 GIG44P09565 113 aaPredicted RBP6.45□□□□□ -1.38
CLTCL1-208ENST00000615606 LAMA3Q16787 3333 aa6.44□□□□□ -1.38
CLTCL1-208ENST00000615606 CIRBP-AS1Q8TBR5 109 aa6.44□□□□□ -1.38
CLTCL1-208ENST00000615606 V9GYY9 64 aa6.44□□□□□ -1.38
CLTCL1-208ENST00000615606 Q9BRP9 147 aa6.44□□□□□ -1.38
CLTCL1-208ENST00000615606 RTL8CO15255 209 aa6.43□□□□□ -1.38
CLTCL1-208ENST00000615606 Q8N3U1 123 aa6.43□□□□□ -1.38
CLTCL1-208ENST00000615606 A0A087WYN8 130 aa6.43□□□□□ -1.38
CLTCL1-208ENST00000615606 GVQW2A0A096LPI5 108 aaPredicted RBP6.42□□□□□ -1.38
CLTCL1-208ENST00000615606 LINC00612Q8N6U2 182 aa6.42□□□□□ -1.38
CLTCL1-208ENST00000615606 LINC00575Q6W349 94 aa6.42□□□□□ -1.38
CLTCL1-208ENST00000615606 PRLHP81277 87 aa6.41□□□□□ -1.38
CLTCL1-208ENST00000615606 LINC00337Q8N6G1 96 aa6.41□□□□□ -1.38
CLTCL1-208ENST00000615606 SMIM26A0A096LP01 95 aa6.41□□□□□ -1.38
CLTCL1-208ENST00000615606 SMCR5Q8TEV8 140 aa6.4□□□□□ -1.38
CLTCL1-208ENST00000615606 LINC00167Q96N53 147 aa6.4□□□□□ -1.38
CLTCL1-208ENST00000615606 C16orf90A8MZG2 172 aa6.4□□□□□ -1.38
CLTCL1-208ENST00000615606 PRR4Q16378 134 aa6.4□□□□□ -1.38
CLTCL1-208ENST00000615606 MGAM2Q2M2H8 2515 aa6.4□□□□□ -1.39
CLTCL1-208ENST00000615606 A0A087WVE0 104 aa6.38□□□□□ -1.39
CLTCL1-208ENST00000615606 FAM229AH3BQW9 127 aa6.38□□□□□ -1.39
CLTCL1-208ENST00000615606 FAM30AQ9NZY2 134 aa6.38□□□□□ -1.39
CLTCL1-208ENST00000615606 TRAV7A0A075B6U4 112 aa6.38□□□□□ -1.39
CLTCL1-208ENST00000615606 Q8N9L7 120 aa6.37□□□□□ -1.39
CLTCL1-208ENST00000615606 C1orf195Q5TG92 126 aa6.37□□□□□ -1.39
CLTCL1-208ENST00000615606 LIMD2Q9BT23 127 aa6.37□□□□□ -1.39
CLTCL1-208ENST00000615606 A6NED7 52 aa6.37□□□□□ -1.39
CLTCL1-208ENST00000615606 ATRQ13535 2644 aa6.36□□□□□ -1.39
CLTCL1-208ENST00000615606 TRBV7-6A0A0J9YX20 115 aa6.36□□□□□ -1.39
CLTCL1-208ENST00000615606 SERP1Q9Y6X1 66 aa6.36□□□□□ -1.39
CLTCL1-208ENST00000615606 Q6ZRP5 223 aa6.36□□□□□ -1.39
CLTCL1-208ENST00000615606 PRR34Q9NV39 138 aa6.35□□□□□ -1.39
CLTCL1-208ENST00000615606 CENPEQ02224 2701 aa6.35□□□□□ -1.39
CLTCL1-208ENST00000615606 PHF5AQ7RTV0 110 aaKnown RBP6.35□□□□□ -1.39
CLTCL1-208ENST00000615606 PRR15LQ9BU68 103 aa6.34□□□□□ -1.39
CLTCL1-208ENST00000615606 A0A087WSZ3 146 aa6.34□□□□□ -1.39
CLTCL1-208ENST00000615606 WIPF1O43516 503 aa6.34□□□□□ -1.39
CLTCL1-208ENST00000615606 CR1P17927 2039 aa6.33□□□□□ -1.4
CLTCL1-208ENST00000615606 SOSTDC1Q6X4U4 206 aa6.33□□□□□ -1.4
CLTCL1-208ENST00000615606 K7ERS5 55 aa6.33□□□□□ -1.4
CLTCL1-208ENST00000615606 MAST4O15021 2626 aa6.32□□□□□ -1.4
CLTCL1-208ENST00000615606 BRCA2P51587 3418 aa6.32□□□□□ -1.4
CLTCL1-208ENST00000615606 APLNQ9ULZ1 77 aa6.32□□□□□ -1.4
CLTCL1-208ENST00000615606 MGAQ8IWI9 3026 aa6.32□□□□□ -1.4
CLTCL1-208ENST00000615606 ELOF1P60002 83 aaKnown RBP6.31□□□□□ -1.4
CLTCL1-208ENST00000615606 LINC00208Q96KT6 92 aa6.31□□□□□ -1.4
CLTCL1-208ENST00000615606 CDIP1Q9H305 208 aa6.31□□□□□ -1.4
CLTCL1-208ENST00000615606 IGHV6-1A0A0B4J1U7 121 aa6.31□□□□□ -1.4
CLTCL1-208ENST00000615606 KIAA0087Q14695 138 aa6.31□□□□□ -1.4
CLTCL1-208ENST00000615606 CHTF8P0CG12 524 aa6.3□□□□□ -1.4
CLTCL1-208ENST00000615606 Q6ZRX8 168 aa6.3□□□□□ -1.4
CLTCL1-208ENST00000615606 LINC00846Q9NV44 126 aa6.3□□□□□ -1.4
CLTCL1-208ENST00000615606 AKAP13Q12802 2813 aa6.3□□□□□ -1.4
CLTCL1-208ENST00000615606 PLA2G1BP04054 148 aaKnown RBP6.3□□□□□ -1.4
CLTCL1-208ENST00000615606 CRYGAP11844 174 aa6.3□□□□□ -1.4
CLTCL1-208ENST00000615606 BCE1O60756 84 aa6.29□□□□□ -1.4
CLTCL1-208ENST00000615606 LINC01547P58512 204 aaPredicted RBP6.29□□□□□ -1.4
CLTCL1-208ENST00000615606 PRUNE2Q8WUY3 3088 aa6.29□□□□□ -1.4
CLTCL1-208ENST00000615606 Q6ZVQ6 151 aa6.29□□□□□ -1.4
CLTCL1-208ENST00000615606 EPM2AB3EWF7 344 aa6.29□□□□□ -1.4
CLTCL1-208ENST00000615606 MOBPQ13875 183 aa6.29□□□□□ -1.4
CLTCL1-208ENST00000615606 A0A087WTM6 91 aa6.28□□□□□ -1.4
CLTCL1-208ENST00000615606 VPREB1P12018 145 aa6.28□□□□□ -1.4
CLTCL1-208ENST00000615606 LINC00336Q6ZUF6 198 aa6.28□□□□□ -1.4
CLTCL1-208ENST00000615606 IGSF10Q6WRI0 2623 aa6.28□□□□□ -1.4
CLTCL1-208ENST00000615606 PMAIP1Q13794 54 aa6.28□□□□□ -1.4
CLTCL1-208ENST00000615606 TRBV7-7A0A0K0K1E9 115 aa6.27□□□□□ -1.41
CLTCL1-208ENST00000615606 C15orf56Q8N910 161 aa6.27□□□□□ -1.41
CLTCL1-208ENST00000615606 RPL37AP61513 92 aaKnown RBP6.26□□□□□ -1.41
CLTCL1-208ENST00000615606 Q8NBF4 154 aa6.26□□□□□ -1.41
CLTCL1-208ENST00000615606 BPTFQ12830 3046 aa6.25□□□□□ -1.41
CLTCL1-208ENST00000615606 LITAFQ99732 161 aa6.25□□□□□ -1.41
CLTCL1-208ENST00000615606 DEFB116Q30KQ4 102 aa6.25□□□□□ -1.41
CLTCL1-208ENST00000615606 A0A1B0GW54 56 aa6.25□□□□□ -1.41
CLTCL1-208ENST00000615606 C9orf163Q8N9P6 203 aa6.25□□□□□ -1.41
CLTCL1-208ENST00000615606 TYMSOSQ8TAI1 123 aa6.25□□□□□ -1.41
CLTCL1-208ENST00000615606 UNC79Q9P2D8 2635 aa6.24□□□□□ -1.41
CLTCL1-208ENST00000615606 IGLV6-57P01721 117 aa6.24□□□□□ -1.41
CLTCL1-208ENST00000615606 TMEM254Q8TBM7 123 aa6.24□□□□□ -1.41
CLTCL1-208ENST00000615606 SMCPP49901 116 aaPredicted RBP6.24□□□□□ -1.41
CLTCL1-208ENST00000615606 DSPP15924 2871 aaKnown RBP6.24□□□□□ -1.41
CLTCL1-208ENST00000615606 FAM168BA1KXE4 195 aa6.24□□□□□ -1.41
CLTCL1-208ENST00000615606 SPACA4Q8TDM5 124 aa6.24□□□□□ -1.41
CLTCL1-208ENST00000615606 SERTAD4-AS1Q5TG53 156 aa6.23□□□□□ -1.41
CLTCL1-208ENST00000615606 TLX1NBP0CAT3 122 aa6.23□□□□□ -1.41
CLTCL1-208ENST00000615606 IGLV1-50A0A075B6I6 118 aa6.23□□□□□ -1.41
CLTCL1-208ENST00000615606 PCOTHQ58A44 107 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms