RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 XAGE1AQ9HD64 81 aa13.26□□□□□ -0.29
SMARCD2-212ENST00000613943 NDUFC2O95298 119 aa13.25□□□□□ -0.29
SMARCD2-212ENST00000613943 GAGE2AQ6NT46 116 aa13.25□□□□□ -0.29
SMARCD2-212ENST00000613943 C6orf48Q9UBA6 75 aa13.25□□□□□ -0.29
SMARCD2-212ENST00000613943 C6orf99Q4VX62 202 aa13.24□□□□□ -0.29
SMARCD2-212ENST00000613943 TMEM126AQ9H061 195 aa13.24□□□□□ -0.29
SMARCD2-212ENST00000613943 RPL18AQ02543 176 aaKnown RBP13.23□□□□□ -0.29
SMARCD2-212ENST00000613943 DEFB131BA0A096LNP1 70 aa13.23□□□□□ -0.29
SMARCD2-212ENST00000613943 S100A7L2Q5SY68 101 aa13.23□□□□□ -0.29
SMARCD2-212ENST00000613943 C11orf45Q8TAV5 145 aa13.22□□□□□ -0.29
SMARCD2-212ENST00000613943 BAHCC1Q9P281 2608 aa13.2□□□□□ -0.3
SMARCD2-212ENST00000613943 ANAPC13Q9BS18 74 aa13.2□□□□□ -0.3
SMARCD2-212ENST00000613943 H3BNG1 76 aa13.19□□□□□ -0.3
SMARCD2-212ENST00000613943 KRTAP26-1Q6PEX3 210 aa13.19□□□□□ -0.3
SMARCD2-212ENST00000613943 INAFM2P0DMQ5 153 aa13.19□□□□□ -0.3
SMARCD2-212ENST00000613943 Q8N814 137 aa13.19□□□□□ -0.3
SMARCD2-212ENST00000613943 ORMDL1Q9P0S3 153 aa13.19□□□□□ -0.3
SMARCD2-212ENST00000613943 ZNF561-AS1K7EIQ3 104 aa13.17□□□□□ -0.3
SMARCD2-212ENST00000613943 MRAPQ8TCY5 172 aa13.17□□□□□ -0.3
SMARCD2-212ENST00000613943 CAMK2N2Q96S95 79 aa13.17□□□□□ -0.3
SMARCD2-212ENST00000613943 NHLRC4P0CG21 123 aaPredicted RBP13.17□□□□□ -0.3
SMARCD2-212ENST00000613943 NDUFV3P56181 108 aaKnown RBP13.17□□□□□ -0.3
SMARCD2-212ENST00000613943 ACYP1P07311 99 aa13.16□□□□□ -0.3
SMARCD2-212ENST00000613943 C15orf56Q8N910 161 aa13.16□□□□□ -0.3
SMARCD2-212ENST00000613943 Q6ZRU5 148 aa13.15□□□□□ -0.3
SMARCD2-212ENST00000613943 IGKV2D-24A0A075B6R9 120 aa13.14□□□□□ -0.31
SMARCD2-212ENST00000613943 OBSCN-AS1Q96MR7 158 aa13.13□□□□□ -0.31
SMARCD2-212ENST00000613943 HUWE1Q7Z6Z7 4374 aaKnown RBP13.13□□□□□ -0.31
SMARCD2-212ENST00000613943 GVQW2A0A096LPI5 108 aaPredicted RBP13.13□□□□□ -0.31
SMARCD2-212ENST00000613943 TRBV10-3A0A0K0K1G6 114 aa13.13□□□□□ -0.31
SMARCD2-212ENST00000613943 MGAM2Q2M2H8 2515 aa13.13□□□□□ -0.31
SMARCD2-212ENST00000613943 Q6Q795 121 aa13.12□□□□□ -0.31
SMARCD2-212ENST00000613943 IGLV6-57P01721 117 aa13.12□□□□□ -0.31
SMARCD2-212ENST00000613943 LINC00167Q96N53 147 aa13.12□□□□□ -0.31
SMARCD2-212ENST00000613943 C1orf43Q9BWL3 253 aa13.12□□□□□ -0.31
SMARCD2-212ENST00000613943 LYSTQ99698 3801 aa13.1□□□□□ -0.31
SMARCD2-212ENST00000613943 LINC00575Q6W349 94 aa13.1□□□□□ -0.31
SMARCD2-212ENST00000613943 TRBV7-7A0A0K0K1E9 115 aa13.09□□□□□ -0.31
SMARCD2-212ENST00000613943 LINC01556Q5JQF7 62 aa13.09□□□□□ -0.31
SMARCD2-212ENST00000613943 LINC00846Q9NV44 126 aa13.09□□□□□ -0.31
SMARCD2-212ENST00000613943 SDIM1Q6ZPB5 146 aa13.08□□□□□ -0.31
SMARCD2-212ENST00000613943 LINC00643Q86TS7 51 aa13.08□□□□□ -0.31
SMARCD2-212ENST00000613943 MUC7Q8TAX7 377 aa13.06□□□□□ -0.32
SMARCD2-212ENST00000613943 TRAV23DV6A0A075B6W5 121 aa13.05□□□□□ -0.32
SMARCD2-212ENST00000613943 A0A1B0GX51 115 aa13.05□□□□□ -0.32
SMARCD2-212ENST00000613943 hADV29S1A0JD25 119 aa13.05□□□□□ -0.32
SMARCD2-212ENST00000613943 TMEM256-PLSCR3K7ERE1 68 aa13.05□□□□□ -0.32
SMARCD2-212ENST00000613943 Q6ZRP5 223 aa13.05□□□□□ -0.32
SMARCD2-212ENST00000613943 FAM236AA0A1B0GUQ0 79 aa13.04□□□□□ -0.32
SMARCD2-212ENST00000613943 FAM236BA0A1B0GV22 79 aa13.04□□□□□ -0.32
SMARCD2-212ENST00000613943 K7EIL1 84 aa13.04□□□□□ -0.32
SMARCD2-212ENST00000613943 VPREB1P12018 145 aa13.04□□□□□ -0.32
SMARCD2-212ENST00000613943 LINC00588Q9Y4M8 146 aa13.04□□□□□ -0.32
SMARCD2-212ENST00000613943 CCDC179H3BU77 68 aa13.03□□□□□ -0.32
SMARCD2-212ENST00000613943 CASC10Q5T4H9 136 aa13.03□□□□□ -0.32
SMARCD2-212ENST00000613943 IGKV3D-7A0A0C4DH55 119 aa13.02□□□□□ -0.33
SMARCD2-212ENST00000613943 NDUFC2-KCTD14E9PQ53 114 aa13.02□□□□□ -0.33
SMARCD2-212ENST00000613943 Q6ZQY7 126 aa13.02□□□□□ -0.33
SMARCD2-212ENST00000613943 ZNF73O43830 326 aaPredicted RBP13□□□□□ -0.33
SMARCD2-212ENST00000613943 DNAH10OSP0CZ25 163 aa13□□□□□ -0.33
SMARCD2-212ENST00000613943 DIRC1Q969H9 104 aa13□□□□□ -0.33
SMARCD2-212ENST00000613943 DNAH1Q9P2D7 4330 aa13□□□□□ -0.33
SMARCD2-212ENST00000613943 TRAV10A0A0B4J240 114 aa12.99□□□□□ -0.33
SMARCD2-212ENST00000613943 CCKP06307 115 aa12.99□□□□□ -0.33
SMARCD2-212ENST00000613943 C2orf48Q96LS8 159 aa12.99□□□□□ -0.33
SMARCD2-212ENST00000613943 TM2D3Q9BRN9 247 aa12.99□□□□□ -0.33
SMARCD2-212ENST00000613943 JMJD7-PLA2G4BH0Y9G9 81 aa12.97□□□□□ -0.33
SMARCD2-212ENST00000613943 SYCNQ0VAF6 134 aa12.97□□□□□ -0.33
SMARCD2-212ENST00000613943 LAMTOR3Q9UHA4 124 aa12.97□□□□□ -0.33
SMARCD2-212ENST00000613943 STAB2Q8WWQ8 2551 aa12.97□□□□□ -0.33
SMARCD2-212ENST00000613943 COL7A1Q02388 2944 aa12.96□□□□□ -0.33
SMARCD2-212ENST00000613943 B5MCH6 92 aa12.96□□□□□ -0.34
SMARCD2-212ENST00000613943 IMUPQ9GZP8 106 aa12.95□□□□□ -0.34
SMARCD2-212ENST00000613943 M0R2N4 97 aa12.95□□□□□ -0.34
SMARCD2-212ENST00000613943 COX7BP24311 80 aa12.94□□□□□ -0.34
SMARCD2-212ENST00000613943 SERTAD4-AS1Q5TG53 156 aa12.94□□□□□ -0.34
SMARCD2-212ENST00000613943 A0A087WVE0 104 aa12.93□□□□□ -0.34
SMARCD2-212ENST00000613943 M0R378 163 aa12.93□□□□□ -0.34
SMARCD2-212ENST00000613943 DNAH10Q8IVF4 4471 aa12.93□□□□□ -0.34
SMARCD2-212ENST00000613943 ELOF1P60002 83 aaKnown RBP12.92□□□□□ -0.34
SMARCD2-212ENST00000613943 USP17L23D6RBM5 183 aa12.91□□□□□ -0.34
SMARCD2-212ENST00000613943 RBM3P98179 157 aaKnown RBP12.91□□□□□ -0.34
SMARCD2-212ENST00000613943 FAM168BA1KXE4 195 aa12.89□□□□□ -0.35
SMARCD2-212ENST00000613943 Q6ZQT0 140 aa12.88□□□□□ -0.35
SMARCD2-212ENST00000613943 Q6JHZ5 121 aa12.87□□□□□ -0.35
SMARCD2-212ENST00000613943 SS18L2Q9UHA2 77 aa12.87□□□□□ -0.35
SMARCD2-212ENST00000613943 CSMD3Q7Z407 3707 aa12.86□□□□□ -0.35
SMARCD2-212ENST00000613943 NKAPP1Q8N9T2 125 aa12.85□□□□□ -0.35
SMARCD2-212ENST00000613943 C7orf33Q8WU49 177 aa12.85□□□□□ -0.35
SMARCD2-212ENST00000613943 RPL37AP8A6NKH3 93 aa12.84□□□□□ -0.35
SMARCD2-212ENST00000613943 LINC00528Q8N1L1 170 aa12.84□□□□□ -0.35
SMARCD2-212ENST00000613943 DNAH9Q9NYC9 4486 aa12.83□□□□□ -0.35
SMARCD2-212ENST00000613943 HIST1H4AP62805 103 aaKnown RBP12.83□□□□□ -0.36
SMARCD2-212ENST00000613943 DSCR8Q96T75 97 aa12.83□□□□□ -0.36
SMARCD2-212ENST00000613943 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.82□□□□□ -0.36
SMARCD2-212ENST00000613943 TENM2Q9NT68 2774 aa12.82□□□□□ -0.36
SMARCD2-212ENST00000613943 DNAH7Q8WXX0 4024 aa12.81□□□□□ -0.36
SMARCD2-212ENST00000613943 KRTAP1-5Q9BYS1 174 aa12.81□□□□□ -0.36
SMARCD2-212ENST00000613943 LOC110117498A0A087WWA1 95 aa12.79□□□□□ -0.36
SMARCD2-212ENST00000613943 KRTAP7-1Q8IUC3 87 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 162.1 ms