RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 PRR34Q9NV39 138 aa9.47□□□□□ -0.89
PCDHGA3-202ENST00000612467 A0A0J9YWU9 116 aa9.47□□□□□ -0.89
PCDHGA3-202ENST00000612467 Q6Q795 121 aa9.47□□□□□ -0.89
PCDHGA3-202ENST00000612467 LINC01561Q8N1V8 128 aa9.46□□□□□ -0.89
PCDHGA3-202ENST00000612467 H0YGX0 51 aa9.46□□□□□ -0.9
PCDHGA3-202ENST00000612467 C6orf99Q4VX62 202 aa9.46□□□□□ -0.9
PCDHGA3-202ENST00000612467 FAM240AA0A1B0GVK7 77 aa9.45□□□□□ -0.9
PCDHGA3-202ENST00000612467 RPL18AQ02543 176 aaKnown RBP9.45□□□□□ -0.9
PCDHGA3-202ENST00000612467 C6orf48Q9UBA6 75 aa9.45□□□□□ -0.9
PCDHGA3-202ENST00000612467 CXCL5P42830 114 aa9.44□□□□□ -0.9
PCDHGA3-202ENST00000612467 ESRGQ1W209 222 aa9.44□□□□□ -0.9
PCDHGA3-202ENST00000612467 KLK5Q9Y337 293 aaPredicted RBP9.44□□□□□ -0.9
PCDHGA3-202ENST00000612467 COX17Q14061 63 aa9.43□□□□□ -0.9
PCDHGA3-202ENST00000612467 S100A7L2Q5SY68 101 aa9.42□□□□□ -0.9
PCDHGA3-202ENST00000612467 DNAH3Q8TD57 4116 aa9.42□□□□□ -0.9
PCDHGA3-202ENST00000612467 LOC107984640A0A0U1RRK4 108 aa9.41□□□□□ -0.9
PCDHGA3-202ENST00000612467 TMEM126AQ9H061 195 aa9.41□□□□□ -0.9
PCDHGA3-202ENST00000612467 MGAM2Q2M2H8 2515 aa9.41□□□□□ -0.9
PCDHGA3-202ENST00000612467 Q8N814 137 aa9.4□□□□□ -0.9
PCDHGA3-202ENST00000612467 NDUFC2O95298 119 aa9.4□□□□□ -0.9
PCDHGA3-202ENST00000612467 ORMDL1Q9P0S3 153 aa9.4□□□□□ -0.9
PCDHGA3-202ENST00000612467 FAM236AA0A1B0GUQ0 79 aa9.4□□□□□ -0.91
PCDHGA3-202ENST00000612467 FAM236BA0A1B0GV22 79 aa9.4□□□□□ -0.91
PCDHGA3-202ENST00000612467 INAFM2P0DMQ5 153 aa9.39□□□□□ -0.91
PCDHGA3-202ENST00000612467 LYSTQ99698 3801 aa9.39□□□□□ -0.91
PCDHGA3-202ENST00000612467 KRTAP26-1Q6PEX3 210 aa9.39□□□□□ -0.91
PCDHGA3-202ENST00000612467 DEFB131BA0A096LNP1 70 aa9.38□□□□□ -0.91
PCDHGA3-202ENST00000612467 LINC00846Q9NV44 126 aa9.38□□□□□ -0.91
PCDHGA3-202ENST00000612467 EGFEM1PQ0D2K5 195 aa9.38□□□□□ -0.91
PCDHGA3-202ENST00000612467 MRAPQ8TCY5 172 aa9.38□□□□□ -0.91
PCDHGA3-202ENST00000612467 TRBV10-3A0A0K0K1G6 114 aa9.37□□□□□ -0.91
PCDHGA3-202ENST00000612467 Q6ZRU5 148 aa9.37□□□□□ -0.91
PCDHGA3-202ENST00000612467 CAMK2N2Q96S95 79 aa9.37□□□□□ -0.91
PCDHGA3-202ENST00000612467 HUWE1Q7Z6Z7 4374 aaKnown RBP9.37□□□□□ -0.91
PCDHGA3-202ENST00000612467 ACYP1P07311 99 aa9.37□□□□□ -0.91
PCDHGA3-202ENST00000612467 IGKV3D-7A0A0C4DH55 119 aa9.36□□□□□ -0.91
PCDHGA3-202ENST00000612467 ZNF561-AS1K7EIQ3 104 aa9.36□□□□□ -0.91
PCDHGA3-202ENST00000612467 C15orf56Q8N910 161 aa9.36□□□□□ -0.91
PCDHGA3-202ENST00000612467 C11orf45Q8TAV5 145 aa9.36□□□□□ -0.91
PCDHGA3-202ENST00000612467 TRBV7-7A0A0K0K1E9 115 aa9.36□□□□□ -0.91
PCDHGA3-202ENST00000612467 SDIM1Q6ZPB5 146 aa9.36□□□□□ -0.91
PCDHGA3-202ENST00000612467 OBSCN-AS1Q96MR7 158 aa9.36□□□□□ -0.91
PCDHGA3-202ENST00000612467 IGKV2D-24A0A075B6R9 120 aa9.35□□□□□ -0.91
PCDHGA3-202ENST00000612467 LINC00643Q86TS7 51 aa9.35□□□□□ -0.91
PCDHGA3-202ENST00000612467 LINC00167Q96N53 147 aa9.33□□□□□ -0.92
PCDHGA3-202ENST00000612467 IGLV6-57P01721 117 aa9.33□□□□□ -0.92
PCDHGA3-202ENST00000612467 LINC00575Q6W349 94 aa9.33□□□□□ -0.92
PCDHGA3-202ENST00000612467 C9orf153Q5TBE3 101 aa9.32□□□□□ -0.92
PCDHGA3-202ENST00000612467 CASC10Q5T4H9 136 aa9.32□□□□□ -0.92
PCDHGA3-202ENST00000612467 M0R2N4 97 aa9.31□□□□□ -0.92
PCDHGA3-202ENST00000612467 STAB2Q8WWQ8 2551 aa9.31□□□□□ -0.92
PCDHGA3-202ENST00000612467 A0A087WVE0 104 aa9.31□□□□□ -0.92
PCDHGA3-202ENST00000612467 C1orf43Q9BWL3 253 aa9.31□□□□□ -0.92
PCDHGA3-202ENST00000612467 CYSTM1Q9H1C7 97 aa9.31□□□□□ -0.92
PCDHGA3-202ENST00000612467 GVQW2A0A096LPI5 108 aaPredicted RBP9.3□□□□□ -0.92
PCDHGA3-202ENST00000612467 hADV29S1A0JD25 119 aa9.3□□□□□ -0.92
PCDHGA3-202ENST00000612467 H3BNG1 76 aa9.3□□□□□ -0.92
PCDHGA3-202ENST00000612467 Q6ZQY7 126 aa9.3□□□□□ -0.92
PCDHGA3-202ENST00000612467 DNAH10Q8IVF4 4471 aa9.3□□□□□ -0.92
PCDHGA3-202ENST00000612467 COL7A1Q02388 2944 aa9.3□□□□□ -0.92
PCDHGA3-202ENST00000612467 Q6ZRP5 223 aa9.3□□□□□ -0.92
PCDHGA3-202ENST00000612467 TRAV23DV6A0A075B6W5 121 aa9.29□□□□□ -0.92
PCDHGA3-202ENST00000612467 VPREB1P12018 145 aa9.28□□□□□ -0.92
PCDHGA3-202ENST00000612467 C3orf22Q8N5N4 141 aa9.28□□□□□ -0.92
PCDHGA3-202ENST00000612467 TMEM256-PLSCR3K7ERE1 68 aa9.28□□□□□ -0.92
PCDHGA3-202ENST00000612467 IMUPQ9GZP8 106 aa9.28□□□□□ -0.92
PCDHGA3-202ENST00000612467 CSMD3Q7Z407 3707 aa9.28□□□□□ -0.92
PCDHGA3-202ENST00000612467 DNAH1Q9P2D7 4330 aa9.28□□□□□ -0.92
PCDHGA3-202ENST00000612467 CCKP06307 115 aa9.27□□□□□ -0.93
PCDHGA3-202ENST00000612467 LINC01556Q5JQF7 62 aa9.26□□□□□ -0.93
PCDHGA3-202ENST00000612467 LAMTOR3Q9UHA4 124 aa9.26□□□□□ -0.93
PCDHGA3-202ENST00000612467 TENM2Q9NT68 2774 aa9.26□□□□□ -0.93
PCDHGA3-202ENST00000612467 ZNF73O43830 326 aaPredicted RBP9.26□□□□□ -0.93
PCDHGA3-202ENST00000612467 LINC00588Q9Y4M8 146 aa9.26□□□□□ -0.93
PCDHGA3-202ENST00000612467 FAM19A5Q7Z5A7 132 aaPredicted RBP9.25□□□□□ -0.93
PCDHGA3-202ENST00000612467 A0A1B0GX51 115 aa9.25□□□□□ -0.93
PCDHGA3-202ENST00000612467 DIRC1Q969H9 104 aa9.25□□□□□ -0.93
PCDHGA3-202ENST00000612467 NDUFC2-KCTD14E9PQ53 114 aa9.24□□□□□ -0.93
PCDHGA3-202ENST00000612467 K7EIL1 84 aa9.24□□□□□ -0.93
PCDHGA3-202ENST00000612467 SERTAD4-AS1Q5TG53 156 aa9.23□□□□□ -0.93
PCDHGA3-202ENST00000612467 JMJD7-PLA2G4BH0Y9G9 81 aa9.23□□□□□ -0.93
PCDHGA3-202ENST00000612467 C2orf48Q96LS8 159 aa9.23□□□□□ -0.93
PCDHGA3-202ENST00000612467 UQCRQO14949 82 aa9.22□□□□□ -0.93
PCDHGA3-202ENST00000612467 SYCNQ0VAF6 134 aa9.22□□□□□ -0.93
PCDHGA3-202ENST00000612467 FAM168BA1KXE4 195 aa9.22□□□□□ -0.93
PCDHGA3-202ENST00000612467 DNAH9Q9NYC9 4486 aa9.21□□□□□ -0.93
PCDHGA3-202ENST00000612467 COX7BP24311 80 aa9.21□□□□□ -0.93
PCDHGA3-202ENST00000612467 RBM3P98179 157 aaKnown RBP9.21□□□□□ -0.94
PCDHGA3-202ENST00000612467 HIST1H4AP62805 103 aaKnown RBP9.2□□□□□ -0.94
PCDHGA3-202ENST00000612467 MUC7Q8TAX7 377 aa9.2□□□□□ -0.94
PCDHGA3-202ENST00000612467 DNAH10OSP0CZ25 163 aa9.2□□□□□ -0.94
PCDHGA3-202ENST00000612467 Q6JHZ5 121 aa9.19□□□□□ -0.94
PCDHGA3-202ENST00000612467 Q6ZQT0 140 aa9.19□□□□□ -0.94
PCDHGA3-202ENST00000612467 M0R378 163 aa9.19□□□□□ -0.94
PCDHGA3-202ENST00000612467 ELOF1P60002 83 aaKnown RBP9.19□□□□□ -0.94
PCDHGA3-202ENST00000612467 FAM19A1Q7Z5A9 133 aa9.19□□□□□ -0.94
PCDHGA3-202ENST00000612467 TRAV10A0A0B4J240 114 aa9.18□□□□□ -0.94
PCDHGA3-202ENST00000612467 RPL37AP8A6NKH3 93 aa9.18□□□□□ -0.94
PCDHGA3-202ENST00000612467 COX7CP15954 63 aa9.18□□□□□ -0.94
PCDHGA3-202ENST00000612467 USP17L23D6RBM5 183 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms