RNA–Protein interactions for RNA: ENST00000611205.4

CDKN3-211, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-211ENST00000611205 CBLN2Q8IUK8 224 aa14.03□□□□□ -0.16
CDKN3-211ENST00000611205 PLEKHB2Q96CS7 222 aa14.03□□□□□ -0.16
CDKN3-211ENST00000611205 RPS10P5Q9NQ39 176 aa14.03□□□□□ -0.16
CDKN3-211ENST00000611205 CTAG1AP78358 180 aa14.01□□□□□ -0.17
CDKN3-211ENST00000611205 COX17Q14061 63 aa14.01□□□□□ -0.17
CDKN3-211ENST00000611205 Q8NDZ9 215 aa14.01□□□□□ -0.17
CDKN3-211ENST00000611205 HIGD2AQ9BW72 106 aa14.01□□□□□ -0.17
CDKN3-211ENST00000611205 PPDPFQ9H3Y8 114 aa14□□□□□ -0.17
CDKN3-211ENST00000611205 A0A096LNJ9 63 aa13.97□□□□□ -0.17
CDKN3-211ENST00000611205 TMEM170BQ5T4T1 132 aa13.95□□□□□ -0.18
CDKN3-211ENST00000611205 LINC00614P0C842 121 aa13.94□□□□□ -0.18
CDKN3-211ENST00000611205 C18orf32Q8TCD1 76 aa13.94□□□□□ -0.18
CDKN3-211ENST00000611205 TRAPPC1Q9Y5R8 145 aa13.94□□□□□ -0.18
CDKN3-211ENST00000611205 C11orf86A6NJI1 115 aa13.93□□□□□ -0.18
CDKN3-211ENST00000611205 LINC00158P58513 81 aa13.93□□□□□ -0.18
CDKN3-211ENST00000611205 SPAG11AQ6PDA7 123 aa13.93□□□□□ -0.18
CDKN3-211ENST00000611205 SFTA2Q6UW10 78 aa13.93□□□□□ -0.18
CDKN3-211ENST00000611205 SPRR4Q96PI1 79 aa13.93□□□□□ -0.18
CDKN3-211ENST00000611205 HBDP02042 147 aa13.92□□□□□ -0.18
CDKN3-211ENST00000611205 PMCHL1Q16048 86 aa13.92□□□□□ -0.18
CDKN3-211ENST00000611205 URB1-AS1Q96HZ7 61 aa13.92□□□□□ -0.18
CDKN3-211ENST00000611205 A0A0U1RRA0 63 aa13.91□□□□□ -0.18
CDKN3-211ENST00000611205 C4orf48Q5BLP8 95 aa13.91□□□□□ -0.18
CDKN3-211ENST00000611205 BAGE3Q86Y29 109 aa13.91□□□□□ -0.18
CDKN3-211ENST00000611205 ZNF706Q9Y5V0 76 aaPredicted RBP13.88□□□□□ -0.19
CDKN3-211ENST00000611205 APOC3P02656 99 aa13.87□□□□□ -0.19
CDKN3-211ENST00000611205 FP248Q71RG6 208 aaPredicted RBP13.87□□□□□ -0.19
CDKN3-211ENST00000611205 KRTAP9-6A0A140TA67 174 aa13.86□□□□□ -0.19
CDKN3-211ENST00000611205 SNAPINO95295 136 aa13.86□□□□□ -0.19
CDKN3-211ENST00000611205 SVBPQ8N300 66 aa13.86□□□□□ -0.19
CDKN3-211ENST00000611205 LINC00337Q8N6G1 96 aa13.86□□□□□ -0.19
CDKN3-211ENST00000611205 DAND5Q8N907 189 aa13.86□□□□□ -0.19
CDKN3-211ENST00000611205 Q8NBF4 154 aa13.85□□□□□ -0.19
CDKN3-211ENST00000611205 CHTOPQ9Y3Y2 248 aaKnown RBP13.84□□□□□ -0.19
CDKN3-211ENST00000611205 PRYO14603 147 aa13.83□□□□□ -0.2
CDKN3-211ENST00000611205 NCR3O14931 201 aa13.81□□□□□ -0.2
CDKN3-211ENST00000611205 SMIM13P0DJ93 91 aa13.81□□□□□ -0.2
CDKN3-211ENST00000611205 BOD1L2Q8IYS8 172 aa13.81□□□□□ -0.2
CDKN3-211ENST00000611205 TMEM223A0PJW6 202 aa13.8□□□□□ -0.2
CDKN3-211ENST00000611205 SMCR5Q8TEV8 140 aa13.8□□□□□ -0.2
CDKN3-211ENST00000611205 KRTAP13-3Q3SY46 172 aa13.79□□□□□ -0.2
CDKN3-211ENST00000611205 MEIG1Q5JSS6 88 aa13.79□□□□□ -0.2
CDKN3-211ENST00000611205 ETDCA0A1B0GVM5 59 aa13.77□□□□□ -0.21
CDKN3-211ENST00000611205 SPRR1AP35321 89 aa13.76□□□□□ -0.21
CDKN3-211ENST00000611205 MIR7-3HGQ8N6C7 128 aa13.76□□□□□ -0.21
CDKN3-211ENST00000611205 CHCHD1Q96BP2 118 aaKnown RBP13.76□□□□□ -0.21
CDKN3-211ENST00000611205 YPEL4Q96NS1 127 aa13.76□□□□□ -0.21
CDKN3-211ENST00000611205 KCNQ1DNQ9H478 68 aa13.76□□□□□ -0.21
CDKN3-211ENST00000611205 TMA7Q9Y2S6 64 aaKnown RBP13.76□□□□□ -0.21
CDKN3-211ENST00000611205 SPINK1P00995 79 aa13.75□□□□□ -0.21
CDKN3-211ENST00000611205 ASB16-AS1Q495Z4 193 aa13.74□□□□□ -0.21
CDKN3-211ENST00000611205 TRAV12-1A0A0B4J245 112 aa13.73□□□□□ -0.21
CDKN3-211ENST00000611205 TRBV10-3A0A0K0K1G6 114 aa13.72□□□□□ -0.21
CDKN3-211ENST00000611205 KRTAP4-16G5E9R7 235 aaPredicted RBP13.72□□□□□ -0.21
CDKN3-211ENST00000611205 GAGE2AQ6NT46 116 aa13.72□□□□□ -0.21
CDKN3-211ENST00000611205 IFI27L1Q96BM0 104 aa13.71□□□□□ -0.21
CDKN3-211ENST00000611205 LINC01547P58512 204 aaPredicted RBP13.7□□□□□ -0.22
CDKN3-211ENST00000611205 HERV-K104P63124 156 aa13.7□□□□□ -0.22
CDKN3-211ENST00000611205 IGLV9-49A0A0B4J1Y8 123 aa13.69□□□□□ -0.22
CDKN3-211ENST00000611205 S100A12P80511 92 aa13.69□□□□□ -0.22
CDKN3-211ENST00000611205 LINC00483Q53H64 154 aa13.69□□□□□ -0.22
CDKN3-211ENST00000611205 MOBPQ13875 183 aa13.68□□□□□ -0.22
CDKN3-211ENST00000611205 NDUFA12Q9UI09 145 aa13.68□□□□□ -0.22
CDKN3-211ENST00000611205 LOC105371267A0A1B0GV96 52 aa13.67□□□□□ -0.22
CDKN3-211ENST00000611205 SEC61BP60468 96 aaKnown RBP13.67□□□□□ -0.22
CDKN3-211ENST00000611205 KRTAP4-1Q9BYQ7 146 aa13.67□□□□□ -0.22
CDKN3-211ENST00000611205 LINC00587B1AMM8 73 aa13.66□□□□□ -0.22
CDKN3-211ENST00000611205 MAP1LC3CQ9BXW4 147 aa13.66□□□□□ -0.22
CDKN3-211ENST00000611205 B5MCH6 92 aa13.65□□□□□ -0.22
CDKN3-211ENST00000611205 MYMXA0A1B0GTQ4 84 aa13.64□□□□□ -0.23
CDKN3-211ENST00000611205 ERC2-IT1O76042 136 aa13.64□□□□□ -0.23
CDKN3-211ENST00000611205 HSBP1O75506 76 aa13.63□□□□□ -0.23
CDKN3-211ENST00000611205 Q8N377 158 aa13.63□□□□□ -0.23
CDKN3-211ENST00000611205 FAM19A2Q8N3H0 131 aa13.63□□□□□ -0.23
CDKN3-211ENST00000611205 SSBP3-AS1Q7Z2R9 100 aa13.62□□□□□ -0.23
CDKN3-211ENST00000611205 DDTP30046 118 aa13.61□□□□□ -0.23
CDKN3-211ENST00000611205 H0Y8G0 127 aa13.6□□□□□ -0.23
CDKN3-211ENST00000611205 RPS29P62273 56 aaKnown RBP13.6□□□□□ -0.23
CDKN3-211ENST00000611205 Q9BRP9 147 aa13.59□□□□□ -0.23
CDKN3-211ENST00000611205 SLC25A20O43772 301 aa13.57□□□□□ -0.24
CDKN3-211ENST00000611205 TSPEAR-AS2P59090 65 aa13.57□□□□□ -0.24
CDKN3-211ENST00000611205 TRGC2P03986 189 aa13.56□□□□□ -0.24
CDKN3-211ENST00000611205 Q6ZRX8 168 aa13.56□□□□□ -0.24
CDKN3-211ENST00000611205 TRBV10-2A0A0K0K1G8 114 aa13.55□□□□□ -0.24
CDKN3-211ENST00000611205 LOC107984156A0A0G2JMH3 177 aa13.54□□□□□ -0.24
CDKN3-211ENST00000611205 C9orf153Q5TBE3 101 aa13.54□□□□□ -0.24
CDKN3-211ENST00000611205 ARL17AQ8IVW1 177 aa13.54□□□□□ -0.24
CDKN3-211ENST00000611205 LEPROTO15243 131 aa13.53□□□□□ -0.24
CDKN3-211ENST00000611205 LEPROTL1O95214 131 aa13.53□□□□□ -0.24
CDKN3-211ENST00000611205 MIEN1Q9BRT3 115 aa13.53□□□□□ -0.24
CDKN3-211ENST00000611205 S100A7L2Q5SY68 101 aa13.52□□□□□ -0.25
CDKN3-211ENST00000611205 SPANXB1Q9NS25 103 aaPredicted RBP13.52□□□□□ -0.25
CDKN3-211ENST00000611205 SERF1AO75920 110 aa13.51□□□□□ -0.25
CDKN3-211ENST00000611205 XP32Q5T750 250 aa13.51□□□□□ -0.25
CDKN3-211ENST00000611205 PLNP26678 52 aa13.5□□□□□ -0.25
CDKN3-211ENST00000611205 LINC00310P59036 64 aa13.5□□□□□ -0.25
CDKN3-211ENST00000611205 LCE2DQ5TA82 110 aaPredicted RBP13.49□□□□□ -0.25
CDKN3-211ENST00000611205 J3QQQ9 107 aa13.48□□□□□ -0.25
CDKN3-211ENST00000611205 JOSD1Q15040 202 aaPredicted RBP13.48□□□□□ -0.25
CDKN3-211ENST00000611205 HSPB8Q9UJY1 196 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms