RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 ANAPC16Q96DE5 110 aa9.75□□□□□ -0.85
CHMP4A-211ENST00000609024 ZNF625Q96I27 306 aaPredicted RBP9.72□□□□□ -0.85
CHMP4A-211ENST00000609024 NDUFA6P56556 154 aa9.7□□□□□ -0.86
CHMP4A-211ENST00000609024 KIAA1644Q3SXP7 199 aa9.7□□□□□ -0.86
CHMP4A-211ENST00000609024 CFC1BP0CG36 223 aa9.69□□□□□ -0.86
CHMP4A-211ENST00000609024 SFTA2Q6UW10 78 aa9.69□□□□□ -0.86
CHMP4A-211ENST00000609024 SLC25A20O43772 301 aa9.68□□□□□ -0.86
CHMP4A-211ENST00000609024 SMCO4Q9NRQ5 59 aa9.68□□□□□ -0.86
CHMP4A-211ENST00000609024 IGLV5-39A0A0G2JS06 123 aa9.67□□□□□ -0.86
CHMP4A-211ENST00000609024 LINC00158P58513 81 aa9.67□□□□□ -0.86
CHMP4A-211ENST00000609024 SMCR5Q8TEV8 140 aa9.67□□□□□ -0.86
CHMP4A-211ENST00000609024 IGLV9-49A0A0B4J1Y8 123 aa9.66□□□□□ -0.86
CHMP4A-211ENST00000609024 ETDCA0A1B0GVM5 59 aa9.66□□□□□ -0.86
CHMP4A-211ENST00000609024 PRYO14603 147 aa9.66□□□□□ -0.86
CHMP4A-211ENST00000609024 ATP6V1G1O75348 118 aa9.66□□□□□ -0.86
CHMP4A-211ENST00000609024 S100A12P80511 92 aa9.66□□□□□ -0.86
CHMP4A-211ENST00000609024 IGLC3P0DOY3 106 aa9.65□□□□□ -0.86
CHMP4A-211ENST00000609024 RPS29P62273 56 aaKnown RBP9.65□□□□□ -0.86
CHMP4A-211ENST00000609024 XP32Q5T750 250 aa9.65□□□□□ -0.86
CHMP4A-211ENST00000609024 GAGE2AQ6NT46 116 aa9.65□□□□□ -0.86
CHMP4A-211ENST00000609024 FA2HQ7L5A8 372 aa9.65□□□□□ -0.86
CHMP4A-211ENST00000609024 Q8NDZ9 215 aa9.65□□□□□ -0.86
CHMP4A-211ENST00000609024 MOBPQ13875 183 aa9.64□□□□□ -0.87
CHMP4A-211ENST00000609024 Q8N377 158 aa9.64□□□□□ -0.87
CHMP4A-211ENST00000609024 SSBP3-AS1Q7Z2R9 100 aa9.63□□□□□ -0.87
CHMP4A-211ENST00000609024 A0A0U1RRA0 63 aa9.62□□□□□ -0.87
CHMP4A-211ENST00000609024 ZNF22P17026 224 aaPredicted RBP9.62□□□□□ -0.87
CHMP4A-211ENST00000609024 TMEM170BQ5T4T1 132 aa9.61□□□□□ -0.87
CHMP4A-211ENST00000609024 LINC01546A6NGU7 62 aa9.6□□□□□ -0.87
CHMP4A-211ENST00000609024 LINC00483Q53H64 154 aa9.6□□□□□ -0.87
CHMP4A-211ENST00000609024 LCE2CQ5TA81 110 aa9.6□□□□□ -0.87
CHMP4A-211ENST00000609024 NCR3O14931 201 aa9.59□□□□□ -0.87
CHMP4A-211ENST00000609024 BOD1L2Q8IYS8 172 aa9.59□□□□□ -0.87
CHMP4A-211ENST00000609024 MT1HP80294 61 aa9.58□□□□□ -0.88
CHMP4A-211ENST00000609024 KCNQ1DNQ9H478 68 aa9.58□□□□□ -0.88
CHMP4A-211ENST00000609024 IGLV8-61A0A075B6I0 122 aa9.57□□□□□ -0.88
CHMP4A-211ENST00000609024 SPRR1AP35321 89 aa9.56□□□□□ -0.88
CHMP4A-211ENST00000609024 C9orf153Q5TBE3 101 aa9.56□□□□□ -0.88
CHMP4A-211ENST00000609024 TRAV9-1A0A075B6T8 112 aa9.55□□□□□ -0.88
CHMP4A-211ENST00000609024 M0R2T5 61 aa9.55□□□□□ -0.88
CHMP4A-211ENST00000609024 MEIG1Q5JSS6 88 aa9.55□□□□□ -0.88
CHMP4A-211ENST00000609024 S100PP25815 95 aa9.54□□□□□ -0.88
CHMP4A-211ENST00000609024 PCOTHQ58A44 107 aa9.54□□□□□ -0.88
CHMP4A-211ENST00000609024 BAGE3Q86Y29 109 aa9.53□□□□□ -0.88
CHMP4A-211ENST00000609024 TRBV10-3A0A0K0K1G6 114 aa9.52□□□□□ -0.89
CHMP4A-211ENST00000609024 C11orf86A6NJI1 115 aa9.52□□□□□ -0.89
CHMP4A-211ENST00000609024 SMIM13P0DJ93 91 aa9.52□□□□□ -0.89
CHMP4A-211ENST00000609024 KRTAP4-16G5E9R7 235 aaPredicted RBP9.51□□□□□ -0.89
CHMP4A-211ENST00000609024 FABP9Q0Z7S8 132 aa9.51□□□□□ -0.89
CHMP4A-211ENST00000609024 B5MCH6 92 aa9.5□□□□□ -0.89
CHMP4A-211ENST00000609024 COX19Q49B96 90 aa9.5□□□□□ -0.89
CHMP4A-211ENST00000609024 MIR7-3HGQ8N6C7 128 aa9.5□□□□□ -0.89
CHMP4A-211ENST00000609024 LINC00587B1AMM8 73 aa9.49□□□□□ -0.89
CHMP4A-211ENST00000609024 ERC2-IT1O76042 136 aa9.49□□□□□ -0.89
CHMP4A-211ENST00000609024 HBDP02042 147 aa9.49□□□□□ -0.89
CHMP4A-211ENST00000609024 MAP1LC3CQ9BXW4 147 aa9.49□□□□□ -0.89
CHMP4A-211ENST00000609024 KRTAP10-6P60371 365 aaPredicted RBP9.48□□□□□ -0.89
CHMP4A-211ENST00000609024 KRTAP19-2Q3LHN2 52 aa9.48□□□□□ -0.89
CHMP4A-211ENST00000609024 CHTOPQ9Y3Y2 248 aaKnown RBP9.48□□□□□ -0.89
CHMP4A-211ENST00000609024 LORP23490 312 aaPredicted RBP9.47□□□□□ -0.89
CHMP4A-211ENST00000609024 LIMD2Q9BT23 127 aa9.47□□□□□ -0.89
CHMP4A-211ENST00000609024 C9orf92A6NGG3 77 aa9.46□□□□□ -0.9
CHMP4A-211ENST00000609024 LINC00614P0C842 121 aa9.46□□□□□ -0.9
CHMP4A-211ENST00000609024 HERV-K104P63124 156 aa9.46□□□□□ -0.9
CHMP4A-211ENST00000609024 JOSD1Q15040 202 aaPredicted RBP9.46□□□□□ -0.9
CHMP4A-211ENST00000609024 DDTP30046 118 aa9.45□□□□□ -0.9
CHMP4A-211ENST00000609024 PMCHL1Q16048 86 aa9.45□□□□□ -0.9
CHMP4A-211ENST00000609024 COX6B2Q6YFQ2 88 aa9.45□□□□□ -0.9
CHMP4A-211ENST00000609024 Q6ZRX8 168 aa9.45□□□□□ -0.9
CHMP4A-211ENST00000609024 SEC11CQ9BY50 192 aa9.45□□□□□ -0.9
CHMP4A-211ENST00000609024 A0A096LNJ9 63 aa9.44□□□□□ -0.9
CHMP4A-211ENST00000609024 TMEM223A0PJW6 202 aa9.44□□□□□ -0.9
CHMP4A-211ENST00000609024 Q9BRP9 147 aa9.43□□□□□ -0.9
CHMP4A-211ENST00000609024 S100A7L2Q5SY68 101 aa9.42□□□□□ -0.9
CHMP4A-211ENST00000609024 MYMXA0A1B0GTQ4 84 aa9.41□□□□□ -0.9
CHMP4A-211ENST00000609024 HRCT1Q6UXD1 115 aa9.41□□□□□ -0.9
CHMP4A-211ENST00000609024 TRBV10-2A0A0K0K1G8 114 aa9.4□□□□□ -0.9
CHMP4A-211ENST00000609024 MIEN1Q9BRT3 115 aa9.4□□□□□ -0.9
CHMP4A-211ENST00000609024 IGLV6-57P01721 117 aa9.38□□□□□ -0.91
CHMP4A-211ENST00000609024 SLC25A34Q6PIV7 304 aa9.38□□□□□ -0.91
CHMP4A-211ENST00000609024 C18orf32Q8TCD1 76 aa9.38□□□□□ -0.91
CHMP4A-211ENST00000609024 HINT1P49773 126 aaPredicted RBP9.37□□□□□ -0.91
CHMP4A-211ENST00000609024 SPANXB1Q9NS25 103 aaPredicted RBP9.37□□□□□ -0.91
CHMP4A-211ENST00000609024 COMMD7Q86VX2 200 aa9.36□□□□□ -0.91
CHMP4A-211ENST00000609024 URB1-AS1Q96HZ7 61 aa9.36□□□□□ -0.91
CHMP4A-211ENST00000609024 TRAPPC1Q9Y5R8 145 aa9.36□□□□□ -0.91
CHMP4A-211ENST00000609024 TRAV23DV6A0A075B6W5 121 aa9.35□□□□□ -0.91
CHMP4A-211ENST00000609024 TRAV12-1A0A0B4J245 112 aa9.35□□□□□ -0.91
CHMP4A-211ENST00000609024 C5orf52A6NGY3 159 aa9.34□□□□□ -0.91
CHMP4A-211ENST00000609024 ST20-AS1Q8NBB2 130 aa9.34□□□□□ -0.91
CHMP4A-211ENST00000609024 TMEM218A2RU14 115 aa9.33□□□□□ -0.92
CHMP4A-211ENST00000609024 UQCC3Q6UW78 93 aa9.33□□□□□ -0.92
CHMP4A-211ENST00000609024 IFI27L1Q96BM0 104 aa9.33□□□□□ -0.92
CHMP4A-211ENST00000609024 KRTAP9-7A8MTY7 169 aa9.32□□□□□ -0.92
CHMP4A-211ENST00000609024 ZNF73O43830 326 aaPredicted RBP9.32□□□□□ -0.92
CHMP4A-211ENST00000609024 CBY1Q9Y3M2 126 aa9.32□□□□□ -0.92
CHMP4A-211ENST00000609024 LOC107984156A0A0G2JMH3 177 aa9.31□□□□□ -0.92
CHMP4A-211ENST00000609024 IFITM2Q01629 132 aa9.31□□□□□ -0.92
CHMP4A-211ENST00000609024 ARL17AQ8IVW1 177 aa9.31□□□□□ -0.92
CHMP4A-211ENST00000609024 LAMTOR3Q9UHA4 124 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms