RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 DEFB108BQ8NET1 73 aa3.2□□□□□ -1.9
HDDC2-208ENST00000609021 ASH1LQ9NR48 2969 aaKnown RBP3.2□□□□□ -1.9
HDDC2-208ENST00000609021 IGHV3OR16-8A0A075B7F1 116 aa3.2□□□□□ -1.9
HDDC2-208ENST00000609021 KRTAP9-2Q9BYQ4 174 aa3.2□□□□□ -1.9
HDDC2-208ENST00000609021 TRGV4A0A0C4DH28 118 aa3.2□□□□□ -1.9
HDDC2-208ENST00000609021 IGHV3-35A0A0C4DH35 117 aa3.2□□□□□ -1.9
HDDC2-208ENST00000609021 H0Y9P7 68 aa3.2□□□□□ -1.9
HDDC2-208ENST00000609021 I3L2K1 104 aa3.2□□□□□ -1.9
HDDC2-208ENST00000609021 CCL18P55774 89 aa3.2□□□□□ -1.9
HDDC2-208ENST00000609021 SPINK7P58062 85 aa3.2□□□□□ -1.9
HDDC2-208ENST00000609021 COA5Q86WW8 74 aa3.2□□□□□ -1.9
HDDC2-208ENST00000609021 SPANXA2-OT1Q8N9U9 137 aa3.2□□□□□ -1.9
HDDC2-208ENST00000609021 LINC01558Q9Y6Z2 57 aa3.2□□□□□ -1.9
HDDC2-208ENST00000609021 POLQO75417 2590 aa3.2□□□□□ -1.9
HDDC2-208ENST00000609021 LRBAP50851 2863 aa3.2□□□□□ -1.9
HDDC2-208ENST00000609021 IGLV9-49A0A0B4J1Y8 123 aa3.19□□□□□ -1.9
HDDC2-208ENST00000609021 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.19□□□□□ -1.9
HDDC2-208ENST00000609021 IGKV4-1P06312 121 aa3.19□□□□□ -1.9
HDDC2-208ENST00000609021 DEFB119Q8N690 84 aa3.19□□□□□ -1.9
HDDC2-208ENST00000609021 PLA2G2DQ9UNK4 145 aa3.19□□□□□ -1.9
HDDC2-208ENST00000609021 CELSR1Q9NYQ6 3014 aa3.19□□□□□ -1.9
HDDC2-208ENST00000609021 IGLV4-60A0A075B6I1 120 aa3.19□□□□□ -1.9
HDDC2-208ENST00000609021 IGKV2-28A0A075B6P5 120 aa3.19□□□□□ -1.9
HDDC2-208ENST00000609021 IGHV3-74A0A0B4J1X5 117 aa3.19□□□□□ -1.9
HDDC2-208ENST00000609021 IGKV2D-28P01615 120 aa3.19□□□□□ -1.9
HDDC2-208ENST00000609021 LINC00467Q9BRT7 94 aa3.19□□□□□ -1.9
HDDC2-208ENST00000609021 ADGRG4Q8IZF6 3080 aa3.19□□□□□ -1.9
HDDC2-208ENST00000609021 CEP295Q9C0D2 2601 aa3.19□□□□□ -1.9
HDDC2-208ENST00000609021 IGHV3-66A0A0C4DH42 116 aa3.19□□□□□ -1.9
HDDC2-208ENST00000609021 TRBV6-4A0A1B0GX49 114 aa3.19□□□□□ -1.9
HDDC2-208ENST00000609021 COX7BP24311 80 aa3.19□□□□□ -1.9
HDDC2-208ENST00000609021 USP9XQ93008 2570 aaPredicted RBP3.18□□□□□ -1.9
HDDC2-208ENST00000609021 SETXQ7Z333 2677 aaKnown RBP3.18□□□□□ -1.9
HDDC2-208ENST00000609021 M0QY20 66 aa3.18□□□□□ -1.9
HDDC2-208ENST00000609021 C17orf58Q2M2W7 97 aa3.18□□□□□ -1.9
HDDC2-208ENST00000609021 DEFB133Q30KQ1 61 aa3.18□□□□□ -1.9
HDDC2-208ENST00000609021 DNAH3Q8TD57 4116 aa3.18□□□□□ -1.9
HDDC2-208ENST00000609021 IGKV3D-15A0A087WSY6 115 aa3.18□□□□□ -1.9
HDDC2-208ENST00000609021 IGKV3-15P01624 115 aa3.18□□□□□ -1.9
HDDC2-208ENST00000609021 IGLV5-39A0A0G2JS06 123 aa3.18□□□□□ -1.9
HDDC2-208ENST00000609021 FAM229AH3BQW9 127 aa3.18□□□□□ -1.9
HDDC2-208ENST00000609021 M0R2N4 97 aa3.18□□□□□ -1.9
HDDC2-208ENST00000609021 IGHV1-46P01743 117 aa3.18□□□□□ -1.9
HDDC2-208ENST00000609021 CHTF8P0CG12 524 aa3.18□□□□□ -1.9
HDDC2-208ENST00000609021 LUZP6Q538Z0 58 aa3.18□□□□□ -1.9
HDDC2-208ENST00000609021 Q6ZQY7 126 aa3.18□□□□□ -1.9
HDDC2-208ENST00000609021 LINC00167Q96N53 147 aa3.18□□□□□ -1.9
HDDC2-208ENST00000609021 ZNRD1Q9P1U0 126 aa3.18□□□□□ -1.9
HDDC2-208ENST00000609021 KRTAP4-8A0A0G2JLE6 195 aa3.17□□□□□ -1.9
HDDC2-208ENST00000609021 K7EIM0 57 aa3.17□□□□□ -1.9
HDDC2-208ENST00000609021 DEFB114Q30KQ6 69 aa3.17□□□□□ -1.9
HDDC2-208ENST00000609021 KRTAP1-3Q8IUG1 177 aa3.17□□□□□ -1.9
HDDC2-208ENST00000609021 LRRK2Q5S007 2527 aa3.17□□□□□ -1.9
HDDC2-208ENST00000609021 FBN2P35556 2912 aa3.17□□□□□ -1.9
HDDC2-208ENST00000609021 IGHV3OR16-12A0A075B7B8 117 aa3.17□□□□□ -1.9
HDDC2-208ENST00000609021 KRTAP9-6A0A140TA67 174 aa3.17□□□□□ -1.9
HDDC2-208ENST00000609021 SMIM1B2RUZ4 78 aa3.17□□□□□ -1.9
HDDC2-208ENST00000609021 CGB3P0DN86 165 aa3.17□□□□□ -1.9
HDDC2-208ENST00000609021 CGB7P0DN87 165 aa3.17□□□□□ -1.9
HDDC2-208ENST00000609021 TNP2Q05952 138 aa3.17□□□□□ -1.9
HDDC2-208ENST00000609021 LINC00575Q6W349 94 aa3.17□□□□□ -1.9
HDDC2-208ENST00000609021 TTTY12Q9BZ98 90 aa3.17□□□□□ -1.9
HDDC2-208ENST00000609021 UNC79Q9P2D8 2635 aa3.17□□□□□ -1.9
HDDC2-208ENST00000609021 IGHV4-28A0A0C4DH34 117 aa3.16□□□□□ -1.9
HDDC2-208ENST00000609021 CLPSL1A2RUU4 121 aa3.16□□□□□ -1.9
HDDC2-208ENST00000609021 IGHV3-23P01764 117 aa3.16□□□□□ -1.9
HDDC2-208ENST00000609021 ZCCHC13Q8WW36 166 aaKnown RBP3.16□□□□□ -1.9
HDDC2-208ENST00000609021 SONP18583 2426 aaKnown RBP3.16□□□□□ -1.9
HDDC2-208ENST00000609021 A0A1W2PNM2 257 aa3.16□□□□□ -1.9
HDDC2-208ENST00000609021 SRRM5B3KS81 715 aa3.16□□□□□ -1.9
HDDC2-208ENST00000609021 LINC00315P59091 139 aa3.16□□□□□ -1.9
HDDC2-208ENST00000609021 KMT2BQ9UMN6 2715 aaPredicted RBP3.16□□□□□ -1.9
HDDC2-208ENST00000609021 ANK2Q01484 3957 aa3.15□□□□□ -1.9
HDDC2-208ENST00000609021 IGLV5-45A0A087WSX0 123 aa3.15□□□□□ -1.9
HDDC2-208ENST00000609021 H3BPC8 53 aa3.15□□□□□ -1.9
HDDC2-208ENST00000609021 C10orf25Q5T742 122 aa3.15□□□□□ -1.9
HDDC2-208ENST00000609021 Q6ZR54 194 aa3.15□□□□□ -1.9
HDDC2-208ENST00000609021 AKAP6Q13023 2319 aa3.15□□□□□ -1.9
HDDC2-208ENST00000609021 MSMBP08118 114 aa3.15□□□□□ -1.91
HDDC2-208ENST00000609021 LINC00242Q5T6M2 205 aa3.15□□□□□ -1.91
HDDC2-208ENST00000609021 ST20-AS1Q8NBB2 130 aa3.15□□□□□ -1.91
HDDC2-208ENST00000609021 HMCN1Q96RW7 5635 aa3.15□□□□□ -1.91
HDDC2-208ENST00000609021 IGKV3OR2-268A0A0C4DH90 116 aa3.15□□□□□ -1.91
HDDC2-208ENST00000609021 IGLV2-23P01705 113 aa3.15□□□□□ -1.91
HDDC2-208ENST00000609021 COX6A2Q02221 97 aa3.15□□□□□ -1.91
HDDC2-208ENST00000609021 ZFAND2AQ8N6M9 145 aa3.15□□□□□ -1.91
HDDC2-208ENST00000609021 PCNX1Q96RV3 2341 aa3.14□□□□□ -1.91
HDDC2-208ENST00000609021 CR1P17927 2039 aa3.14□□□□□ -1.91
HDDC2-208ENST00000609021 CCDC168Q8NDH2 2452 aa3.14□□□□□ -1.91
HDDC2-208ENST00000609021 LCE6AA0A183 80 aa3.14□□□□□ -1.91
HDDC2-208ENST00000609021 INSP01308 110 aa3.14□□□□□ -1.91
HDDC2-208ENST00000609021 KRTAP4-7Q9BYR0 210 aa3.14□□□□□ -1.91
HDDC2-208ENST00000609021 UBR5O95071 2799 aaPredicted RBP3.14□□□□□ -1.91
HDDC2-208ENST00000609021 LY6G6DO95868 133 aa3.14□□□□□ -1.91
HDDC2-208ENST00000609021 IGLV1-47P01700 117 aa3.14□□□□□ -1.91
HDDC2-208ENST00000609021 HTN1P15515 57 aa3.14□□□□□ -1.91
HDDC2-208ENST00000609021 PRR9Q5T870 116 aa3.14□□□□□ -1.91
HDDC2-208ENST00000609021 TENM4Q6N022 2769 aa3.13□□□□□ -1.91
HDDC2-208ENST00000609021 IGKV3-7A0A075B6H7 116 aa3.13□□□□□ -1.91
HDDC2-208ENST00000609021 RTL8CO15255 209 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms